Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06009

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
161,899	+		MPMX19_06007	0.69	-2.1
161,899	+		MPMX19_06007	0.69	-0.4
161,899	+		MPMX19_06007	0.69	+0.4
161,900	-		MPMX19_06007	0.69	+1.1
161,900	-		MPMX19_06007	0.69	+0.1
161,900	-		MPMX19_06007	0.69	+0.0
162,025	+		MPMX19_06007	0.81	-0.6
162,025	+		MPMX19_06007	0.81	-0.5
162,025	+		MPMX19_06007	0.81	-1.3
162,025	+		MPMX19_06007	0.81	-0.6
162,025	+		MPMX19_06007	0.81	-1.4
162,025	+		MPMX19_06007	0.81	-0.3
162,025	+		MPMX19_06007	0.81	-0.3
162,026	-		MPMX19_06007	0.81	+1.0
162,026	-		MPMX19_06007	0.81	-0.1
162,034	+		MPMX19_06007	0.81	-0.4
162,034	+		MPMX19_06007	0.81	-0.6
162,034	+		MPMX19_06007	0.81	-0.8
162,034	+		MPMX19_06007	0.81	-0.9
162,034	+		MPMX19_06007	0.81	+0.5
162,034	+		MPMX19_06007	0.81	+0.2
162,034	+		MPMX19_06007	0.81	-0.9
162,034	+		MPMX19_06007	0.81	-1.0
162,034	+		MPMX19_06007	0.81	-0.7
162,034	+		MPMX19_06007	0.81	-1.5
162,034	+		MPMX19_06007	0.81	-2.2
162,035	-		MPMX19_06007	0.82	+1.1
162,035	-		MPMX19_06007	0.82	-0.0
162,035	-		MPMX19_06007	0.82	-0.6
162,035	-		MPMX19_06007	0.82	-1.7
162,035	-		MPMX19_06007	0.82	-0.0
162,035	-		MPMX19_06007	0.82	-0.6
162,035	-		MPMX19_06007	0.82	-1.0
162,035	-		MPMX19_06007	0.82	-1.0
162,040	+		MPMX19_06007	0.82	-2.3
162,040	+		MPMX19_06007	0.82	-0.1
162,040	+		MPMX19_06007	0.82	-0.9
162,040	+		MPMX19_06007	0.82	-0.1
162,040	+		MPMX19_06007	0.82	-0.6
162,040	+		MPMX19_06007	0.82	-0.4
162,040	+		MPMX19_06007	0.82	+0.9
162,040	+		MPMX19_06007	0.82	-0.0
162,040	+		MPMX19_06007	0.82	+0.1
162,040	+		MPMX19_06007	0.82	-1.1
162,040	+		MPMX19_06007	0.82	-0.5
162,040	+		MPMX19_06007	0.82	+0.1
162,040	+		MPMX19_06007	0.82	+1.1
162,041	-		MPMX19_06007	0.82	-1.0
162,041	-		MPMX19_06007	0.82	-0.6
162,041	-		MPMX19_06007	0.82	+0.2
162,041	-		MPMX19_06007	0.82	-0.3
162,041	-		MPMX19_06007	0.82	-0.2
162,041	-		MPMX19_06007	0.82	+0.5
162,041	-		MPMX19_06007	0.82	-0.3
162,041	-		MPMX19_06007	0.82	-1.3
162,130	+				-0.9
162,130	+				-0.4
162,130	+				+0.6
162,130	+				-1.3
162,130	+				-0.7
162,131	-				-0.3
162,131	-				-0.5
162,131	-				-0.6
162,131	-				-0.5
162,131	-				-0.6
162,190	+				+0.9
162,190	+				-1.5
162,190	+				-1.3
162,190	+				+0.1
162,190	+				-0.2
162,190	+				-2.0
162,190	+				-1.2
162,190	+				+1.2
162,190	+				+0.6
162,190	+				-0.8
162,191	-				+0.4
162,191	-				+0.9
162,191	-				+0.7
162,191	-				+2.7
162,191	-				+0.4
162,191	-				-2.3
162,191	-				-1.6
162,191	-				-0.0
162,191	-				-1.2
162,191	-				-3.0
162,199	+				-0.3
162,199	+				+0.1
162,199	+				+0.4
162,199	+				-0.8
162,199	+				-1.6
162,199	+				-0.3
162,200	-				+0.7
162,200	-				-0.6
162,200	-				-0.1
162,220	+				-1.6
162,221	-				+0.3
162,235	+				-0.4
162,235	+				-1.5
162,235	+				+0.3
162,235	+				-1.0
162,236	-				+0.7
162,236	-				+0.5
162,305	+				-1.5
162,305	+				+0.4
162,306	-				-0.8
162,323	+				-1.9
162,323	+				-1.9
162,324	-				-0.4
162,324	-				+2.3
162,346	+				+0.7
162,346	+				+0.0
162,346	+				-0.1
162,346	+				-0.9
162,346	+				+0.4
162,347	-				-0.2
162,347	-				-0.7
162,347	-				-0.3
162,347	-				-0.5
162,347	-				-0.7
162,347	-				-0.6
162,347	-				-0.8
162,360	+				+1.2
162,360	+				-0.2
162,360	+				-1.8
162,360	+				-1.3
162,360	+				-1.5
162,360	+				+0.6
162,360	+				-0.9
162,360	+				-0.2
162,361	-				-0.6
162,361	-				-1.0
162,361	-				-1.1
162,361	-				-1.1
162,361	-				-0.7
162,361	-				-2.5
162,361	-				-0.2
162,361	-				-0.7
162,361	-				+0.2
162,361	-				-0.3
162,361	-				-0.0
162,361	-				-1.6
162,626	+				+1.3
162,627	-				-1.4
162,627	-				+1.4
162,648	+				-0.3
162,648	+				-2.0
162,648	+				+1.7
162,649	-				-0.6
162,884	+		MPMX19_06009	0.17	+0.1
162,884	+		MPMX19_06009	0.17	-0.0
162,885	-		MPMX19_06009	0.18	-1.3
162,885	-		MPMX19_06009	0.18	-0.8
162,885	-		MPMX19_06009	0.18	+0.4
162,885	-		MPMX19_06009	0.18	-0.3
162,885	-		MPMX19_06009	0.18	-1.9
162,911	+		MPMX19_06009	0.30	-0.2
162,911	+		MPMX19_06009	0.30	-0.8
162,911	+		MPMX19_06009	0.30	+1.0
163,092	+				+0.1
163,093	-				-1.8
163,426	-		MPMX19_06010	0.33	+1.0
163,567	+		MPMX19_06010	0.46	+1.0
163,568	-		MPMX19_06010	0.46	-0.6
163,568	-		MPMX19_06010	0.46	-0.1
163,674	+		MPMX19_06010	0.56	-0.9
163,674	+		MPMX19_06010	0.56	+1.0
163,674	+		MPMX19_06010	0.56	-0.0
163,674	+		MPMX19_06010	0.56	-1.3
163,674	+		MPMX19_06010	0.56	-0.8
163,674	+		MPMX19_06010	0.56	+0.8
163,674	+		MPMX19_06010	0.56	-1.3
163,675	-		MPMX19_06010	0.56	-0.1
163,675	-		MPMX19_06010	0.56	+0.4
163,675	-		MPMX19_06010	0.56	-0.3
163,675	-		MPMX19_06010	0.56	+0.9
163,708	+		MPMX19_06010	0.59	+0.4
163,708	+		MPMX19_06010	0.59	+0.3
163,708	+		MPMX19_06010	0.59	+0.3
163,708	+		MPMX19_06010	0.59	-1.3
163,708	+		MPMX19_06010	0.59	+1.5
163,708	+		MPMX19_06010	0.59	+1.0
163,709	-		MPMX19_06010	0.59	+1.4
163,709	-		MPMX19_06010	0.59	+0.1
163,709	-		MPMX19_06010	0.59	-0.8
163,709	-		MPMX19_06010	0.59	-0.5
163,709	-		MPMX19_06010	0.59	-0.6
163,734	+		MPMX19_06010	0.62	-0.0
163,734	+		MPMX19_06010	0.62	-1.5
163,734	+		MPMX19_06010	0.62	-0.5
163,734	+		MPMX19_06010	0.62	+0.6
163,734	+		MPMX19_06010	0.62	+0.1
163,735	-		MPMX19_06010	0.62	+0.5
163,735	-		MPMX19_06010	0.62	-1.3
163,735	-		MPMX19_06010	0.62	-1.5
163,735	-		MPMX19_06010	0.62	-0.9
163,865	-		MPMX19_06010	0.74	+1.2