Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05966

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
114,706	+		MPMX19_05965	0.31	-0.2
114,706	+		MPMX19_05965	0.31	-0.3
114,706	+		MPMX19_05965	0.31	-1.1
114,707	-		MPMX19_05965	0.31	-0.2
114,707	-		MPMX19_05965	0.31	-1.0
114,769	+		MPMX19_05965	0.39	+0.1
114,769	+		MPMX19_05965	0.39	+0.2
114,769	+		MPMX19_05965	0.39	-0.5
114,769	+		MPMX19_05965	0.39	-0.7
114,770	-		MPMX19_05965	0.39	+0.4
114,770	-		MPMX19_05965	0.39	+0.3
115,057	+		MPMX19_05965	0.74	+0.3
115,057	+		MPMX19_05965	0.74	-0.2
115,057	+		MPMX19_05965	0.74	-3.4
115,057	+		MPMX19_05965	0.74	-0.3
115,057	+		MPMX19_05965	0.74	-0.6
115,058	-		MPMX19_05965	0.74	-2.1
115,058	-		MPMX19_05965	0.74	-0.8
115,058	-		MPMX19_05965	0.74	+0.4
115,058	-		MPMX19_05965	0.74	+0.5
115,376	+				-0.9
115,376	+				-0.3
115,377	-				-1.3
115,433	+				-1.2
115,434	+				-0.8
115,434	+				-0.1
115,434	+				-1.6
115,434	+				-0.8
115,434	+				-1.1
115,434	+				+0.4
115,434	+				+0.1
115,434	+				-0.1
115,434	+				-0.2
115,434	+				-2.1
115,434	+				+0.3
115,434	+				-0.5
115,434	+				+0.5
115,434	+				-1.1
115,434	+				-1.1
115,434	+				+0.3
115,435	-				-0.8
115,435	-				+0.7
115,435	-				-1.8
115,435	-				-0.0
115,435	-				+0.8
115,435	-				+0.3
115,435	-				-0.3
115,435	-				-1.0
115,435	-				-0.8
115,435	-				+0.2
115,563	+				-0.3
115,574	+				-0.0
115,574	+				-0.3
115,574	+				-0.2
115,575	-				-1.0
115,575	-				-1.0
115,575	-				-0.3
115,575	-				+0.0
115,575	-				+0.3
115,585	+				-0.8
115,585	+				+0.1
115,585	+				+2.0
115,585	+				+0.1
115,585	+				-0.2
115,585	+				-1.5
115,585	+				+0.2
115,586	-				-0.3
115,586	-				+0.2
115,587	+				-1.5
115,587	+				-0.9
115,587	+				-1.1
115,588	-				+0.4
115,588	-				-0.8
116,344	+		MPMX19_05966	0.35	-2.5
116,344	+		MPMX19_05966	0.35	-0.9
116,344	+		MPMX19_05966	0.35	-2.4
116,345	-		MPMX19_05966	0.35	-1.6
116,345	-		MPMX19_05966	0.35	-0.2
116,345	-		MPMX19_05966	0.35	-0.9
116,345	-		MPMX19_05966	0.35	-1.3
116,345	-		MPMX19_05966	0.35	-1.7
116,345	-		MPMX19_05966	0.35	-0.1
116,704	+		MPMX19_05966	0.51	+0.6
116,704	+		MPMX19_05966	0.51	-1.5
116,704	+		MPMX19_05966	0.51	-2.4
116,704	+		MPMX19_05966	0.51	-0.0
116,704	+		MPMX19_05966	0.51	-1.1
116,704	+		MPMX19_05966	0.51	-0.5
116,704	+		MPMX19_05966	0.51	+0.7
116,705	-		MPMX19_05966	0.51	+1.0
116,705	-		MPMX19_05966	0.51	-0.1
116,705	-		MPMX19_05966	0.51	-0.6
116,705	-		MPMX19_05966	0.51	-0.4
116,705	-		MPMX19_05966	0.51	+0.5
116,705	-		MPMX19_05966	0.51	-1.0
116,705	-		MPMX19_05966	0.51	-0.9
116,705	-		MPMX19_05966	0.51	-0.6
116,705	-		MPMX19_05966	0.51	-1.6
116,705	-		MPMX19_05966	0.51	-1.1
116,705	-		MPMX19_05966	0.51	+0.5
116,705	-		MPMX19_05966	0.51	+0.9
116,705	-		MPMX19_05966	0.51	-0.2
116,705	-		MPMX19_05966	0.51	+1.2
116,705	-		MPMX19_05966	0.51	-1.5
117,321	+		MPMX19_05966	0.80	-1.6
117,321	+		MPMX19_05966	0.80	+0.1
117,321	+		MPMX19_05966	0.80	+0.0
117,322	-		MPMX19_05966	0.80	-0.4
117,322	-		MPMX19_05966	0.80	-0.2
117,322	-		MPMX19_05966	0.80	-1.5
117,322	-		MPMX19_05966	0.80	-0.3
117,798	+				+1.1
117,798	+				-1.6
117,798	+				-0.2
117,798	+				-1.2
117,798	+				+0.7
117,799	-				-1.8
117,799	-				+0.5
117,799	-				-1.6
117,799	-				+0.8
117,799	-				-1.1
117,799	-				+2.1
117,799	-				-1.1
117,831	-				-0.5
117,891	+				-0.0
117,892	-				-0.0
117,892	-				-0.3
117,892	-				-0.6
117,892	-				-0.6
117,892	-				+1.4
117,892	-				+0.4
117,892	-				-0.6
117,892	-				-0.5
117,892	-				-0.3
117,892	-				-1.0
117,892	-				+0.1
117,892	-				+0.8
117,892	-				-1.0
117,892	-				-0.3
117,892	-				-1.6
118,128	-		MPMX19_05967	0.11	+0.6
118,137	-		MPMX19_05967	0.12	+0.1
118,287	-		MPMX19_05967	0.21	+0.3
118,710	-		MPMX19_05967	0.48	-0.2
118,710	-		MPMX19_05967	0.48	+0.8
118,710	-		MPMX19_05967	0.48	-1.3
118,710	-		MPMX19_05967	0.48	+1.0
118,710	-		MPMX19_05967	0.48	+0.3
118,710	-		MPMX19_05967	0.48	-0.3
118,710	-		MPMX19_05967	0.48	-0.4
118,755	-		MPMX19_05967	0.51	-0.5
118,755	-		MPMX19_05967	0.51	-0.3