Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05468 and MPMX19_05469 are separated by 191 nucleotides MPMX19_05469 and MPMX19_05470 are separated by 260 nucleotides
MPMX19_05468: MPMX19_05468 - Ribosomal RNA large subunit methyltransferase L, at 165,766 to 166,959
_05468
MPMX19_05469: MPMX19_05469 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 167,151 to 167,939
_05469
MPMX19_05470: MPMX19_05470 - hypothetical protein, at 168,200 to 170,269
_05470
Position (kb) 167
168 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 166.337 kb on + strand, within MPMX19_05468 at 166.338 kb on - strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.497 kb on + strand, within MPMX19_05468 at 166.498 kb on - strand, within MPMX19_05468 at 166.498 kb on - strand, within MPMX19_05468 at 166.498 kb on - strand, within MPMX19_05468 at 166.498 kb on - strand, within MPMX19_05468 at 166.498 kb on - strand, within MPMX19_05468 at 166.498 kb on - strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.622 kb on + strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.623 kb on - strand, within MPMX19_05468 at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.965 kb on + strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.966 kb on - strand at 166.969 kb on + strand at 166.969 kb on + strand at 166.969 kb on + strand at 166.969 kb on + strand at 166.969 kb on + strand at 166.970 kb on - strand at 166.970 kb on - strand at 166.970 kb on - strand at 166.970 kb on - strand at 166.970 kb on - strand at 167.066 kb on + strand at 167.066 kb on + strand at 167.066 kb on + strand at 167.067 kb on - strand at 167.210 kb on + strand at 167.210 kb on + strand at 167.211 kb on - strand at 167.649 kb on + strand, within MPMX19_05469 at 167.649 kb on + strand, within MPMX19_05469 at 167.650 kb on - strand, within MPMX19_05469 at 167.650 kb on - strand, within MPMX19_05469 at 167.650 kb on - strand, within MPMX19_05469 at 167.650 kb on - strand, within MPMX19_05469 at 167.650 kb on - strand, within MPMX19_05469 at 167.650 kb on - strand, within MPMX19_05469 at 167.772 kb on + strand, within MPMX19_05469 at 167.772 kb on + strand, within MPMX19_05469 at 167.772 kb on + strand, within MPMX19_05469 at 167.773 kb on - strand, within MPMX19_05469 at 167.773 kb on - strand, within MPMX19_05469 at 167.856 kb on + strand, within MPMX19_05469 at 167.856 kb on + strand, within MPMX19_05469 at 167.856 kb on + strand, within MPMX19_05469 at 167.856 kb on + strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.890 kb on - strand at 167.890 kb on - strand at 167.908 kb on + strand at 168.105 kb on + strand at 168.106 kb on - strand at 168.106 kb on - strand at 168.110 kb on + strand at 168.110 kb on + strand at 168.110 kb on + strand at 168.110 kb on + strand at 168.110 kb on + strand at 168.111 kb on - strand at 168.111 kb on - strand at 168.111 kb on - strand at 168.293 kb on + strand at 168.293 kb on + strand at 168.293 kb on + strand at 168.293 kb on + strand at 168.294 kb on - strand at 168.294 kb on - strand at 168.294 kb on - strand at 168.294 kb on - strand at 168.294 kb on - strand at 168.294 kb on - strand at 168.386 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 166,337 + MPMX19_05468 0.48 -0.6 166,338 - MPMX19_05468 0.48 -1.1 166,497 + MPMX19_05468 0.61 +0.4 166,497 + MPMX19_05468 0.61 -1.2 166,497 + MPMX19_05468 0.61 -0.6 166,497 + MPMX19_05468 0.61 -0.4 166,497 + MPMX19_05468 0.61 -0.9 166,497 + MPMX19_05468 0.61 -0.6 166,497 + MPMX19_05468 0.61 +0.4 166,497 + MPMX19_05468 0.61 +0.1 166,497 + MPMX19_05468 0.61 -0.3 166,497 + MPMX19_05468 0.61 -0.9 166,497 + MPMX19_05468 0.61 -0.7 166,497 + MPMX19_05468 0.61 -1.7 166,497 + MPMX19_05468 0.61 -0.2 166,498 - MPMX19_05468 0.61 -0.9 166,498 - MPMX19_05468 0.61 +0.2 166,498 - MPMX19_05468 0.61 -2.0 166,498 - MPMX19_05468 0.61 -0.6 166,498 - MPMX19_05468 0.61 +0.9 166,498 - MPMX19_05468 0.61 +1.1 166,622 + MPMX19_05468 0.72 -0.6 166,622 + MPMX19_05468 0.72 +0.3 166,622 + MPMX19_05468 0.72 +0.6 166,622 + MPMX19_05468 0.72 -0.5 166,622 + MPMX19_05468 0.72 +0.3 166,622 + MPMX19_05468 0.72 -2.7 166,622 + MPMX19_05468 0.72 -2.4 166,622 + MPMX19_05468 0.72 -0.9 166,622 + MPMX19_05468 0.72 -0.8 166,622 + MPMX19_05468 0.72 +0.6 166,622 + MPMX19_05468 0.72 -2.2 166,622 + MPMX19_05468 0.72 -0.4 166,622 + MPMX19_05468 0.72 +0.6 166,622 + MPMX19_05468 0.72 -0.3 166,622 + MPMX19_05468 0.72 +0.1 166,622 + MPMX19_05468 0.72 -0.5 166,622 + MPMX19_05468 0.72 -0.3 166,622 + MPMX19_05468 0.72 -1.4 166,622 + MPMX19_05468 0.72 +0.5 166,622 + MPMX19_05468 0.72 -0.2 166,622 + MPMX19_05468 0.72 -1.1 166,622 + MPMX19_05468 0.72 +0.0 166,622 + MPMX19_05468 0.72 -0.8 166,623 - MPMX19_05468 0.72 -0.5 166,623 - MPMX19_05468 0.72 +0.6 166,623 - MPMX19_05468 0.72 +0.1 166,623 - MPMX19_05468 0.72 -0.8 166,623 - MPMX19_05468 0.72 -0.3 166,623 - MPMX19_05468 0.72 +0.5 166,623 - MPMX19_05468 0.72 +0.1 166,623 - MPMX19_05468 0.72 -0.4 166,623 - MPMX19_05468 0.72 +0.9 166,623 - MPMX19_05468 0.72 -0.1 166,623 - MPMX19_05468 0.72 -0.6 166,623 - MPMX19_05468 0.72 -1.3 166,623 - MPMX19_05468 0.72 -0.1 166,623 - MPMX19_05468 0.72 -0.0 166,623 - MPMX19_05468 0.72 +0.3 166,623 - MPMX19_05468 0.72 -0.1 166,623 - MPMX19_05468 0.72 -0.7 166,623 - MPMX19_05468 0.72 +0.2 166,623 - MPMX19_05468 0.72 +0.1 166,623 - MPMX19_05468 0.72 -0.0 166,623 - MPMX19_05468 0.72 +0.3 166,623 - MPMX19_05468 0.72 +0.3 166,623 - MPMX19_05468 0.72 +0.2 166,965 + -0.1 166,965 + +0.6 166,965 + -1.3 166,965 + -2.2 166,965 + +1.0 166,965 + -0.1 166,965 + -2.0 166,965 + +1.0 166,965 + +0.1 166,965 + +0.2 166,965 + +0.1 166,965 + +0.4 166,965 + -0.9 166,965 + -2.2 166,965 + +0.7 166,965 + +0.5 166,965 + +0.4 166,965 + +1.0 166,965 + +0.1 166,965 + -0.9 166,965 + -2.1 166,966 - -0.3 166,966 - -0.2 166,966 - -3.0 166,966 - +1.1 166,966 - -0.3 166,966 - -1.5 166,966 - +0.1 166,966 - -2.0 166,966 - -0.6 166,966 - +1.5 166,966 - +0.5 166,966 - -1.3 166,966 - +1.3 166,966 - -0.6 166,966 - -0.4 166,966 - -0.6 166,966 - -0.9 166,966 - -0.1 166,966 - -1.1 166,966 - -1.4 166,966 - -1.2 166,966 - -0.5 166,966 - +2.7 166,966 - -1.7 166,966 - -0.4 166,966 - +1.3 166,966 - +0.7 166,969 + -0.9 166,969 + +1.1 166,969 + -1.4 166,969 + -0.9 166,969 + -1.1 166,970 - -0.7 166,970 - -0.6 166,970 - -1.0 166,970 - -0.0 166,970 - -0.5 167,066 + -0.5 167,066 + -0.7 167,066 + +0.5 167,067 - -1.2 167,210 + -0.9 167,210 + -0.2 167,211 - -0.6 167,649 + MPMX19_05469 0.63 -0.6 167,649 + MPMX19_05469 0.63 -1.9 167,650 - MPMX19_05469 0.63 -0.3 167,650 - MPMX19_05469 0.63 -1.7 167,650 - MPMX19_05469 0.63 +0.6 167,650 - MPMX19_05469 0.63 +1.3 167,650 - MPMX19_05469 0.63 -1.3 167,650 - MPMX19_05469 0.63 +0.1 167,772 + MPMX19_05469 0.79 +0.1 167,772 + MPMX19_05469 0.79 -0.8 167,772 + MPMX19_05469 0.79 -0.6 167,773 - MPMX19_05469 0.79 -0.4 167,773 - MPMX19_05469 0.79 -0.4 167,856 + MPMX19_05469 0.89 +0.3 167,856 + MPMX19_05469 0.89 -0.9 167,856 + MPMX19_05469 0.89 -1.2 167,856 + MPMX19_05469 0.89 -1.1 167,857 - MPMX19_05469 0.89 -1.3 167,857 - MPMX19_05469 0.89 -0.9 167,857 - MPMX19_05469 0.89 -0.7 167,857 - MPMX19_05469 0.89 -1.3 167,857 - MPMX19_05469 0.89 +0.6 167,857 - MPMX19_05469 0.89 +0.1 167,857 - MPMX19_05469 0.89 -1.6 167,890 - -0.6 167,890 - +0.7 167,908 + +0.0 168,105 + +0.6 168,106 - -0.5 168,106 - -1.6 168,110 + +0.3 168,110 + +0.3 168,110 + -0.9 168,110 + -1.4 168,110 + +1.2 168,111 - -1.4 168,111 - -1.2 168,111 - -0.3 168,293 + -0.5 168,293 + -2.4 168,293 + -1.2 168,293 + -1.7 168,294 - +1.1 168,294 - -0.6 168,294 - +0.2 168,294 - +0.9 168,294 - +0.4 168,294 - -1.3 168,386 + -0.4
Or see this region's nucleotide sequence