Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05025 and MPMX19_05026 are separated by 56 nucleotides MPMX19_05026 and MPMX19_05027 are separated by 105 nucleotides
MPMX19_05025: MPMX19_05025 - Cytochrome bd-I ubiquinol oxidase subunit 2, at 510,739 to 511,758
_05025
MPMX19_05026: MPMX19_05026 - hypothetical protein, at 511,815 to 512,516
_05026
MPMX19_05027: MPMX19_05027 - hypothetical protein, at 512,622 to 513,341
_05027
Position (kb)
511
512
513 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 510.853 kb on + strand, within MPMX19_05025 at 510.853 kb on + strand, within MPMX19_05025 at 510.854 kb on - strand, within MPMX19_05025 at 510.854 kb on - strand, within MPMX19_05025 at 510.979 kb on + strand, within MPMX19_05025 at 510.980 kb on - strand, within MPMX19_05025 at 510.980 kb on - strand, within MPMX19_05025 at 510.980 kb on - strand, within MPMX19_05025 at 510.980 kb on - strand, within MPMX19_05025 at 510.980 kb on - strand, within MPMX19_05025 at 511.003 kb on + strand, within MPMX19_05025 at 511.003 kb on + strand, within MPMX19_05025 at 511.003 kb on + strand, within MPMX19_05025 at 511.003 kb on + strand, within MPMX19_05025 at 511.004 kb on - strand, within MPMX19_05025 at 511.004 kb on - strand, within MPMX19_05025 at 511.004 kb on - strand, within MPMX19_05025 at 511.004 kb on - strand, within MPMX19_05025 at 511.004 kb on - strand, within MPMX19_05025 at 511.004 kb on - strand, within MPMX19_05025 at 511.004 kb on - strand, within MPMX19_05025 at 511.004 kb on - strand, within MPMX19_05025 at 511.004 kb on - strand, within MPMX19_05025 at 511.004 kb on - strand, within MPMX19_05025 at 511.004 kb on - strand, within MPMX19_05025 at 511.004 kb on - strand, within MPMX19_05025 at 511.180 kb on + strand, within MPMX19_05025 at 511.180 kb on + strand, within MPMX19_05025 at 511.180 kb on + strand, within MPMX19_05025 at 511.180 kb on + strand, within MPMX19_05025 at 511.180 kb on + strand, within MPMX19_05025 at 511.181 kb on - strand, within MPMX19_05025 at 511.181 kb on - strand, within MPMX19_05025 at 511.261 kb on + strand, within MPMX19_05025 at 511.262 kb on - strand, within MPMX19_05025 at 511.262 kb on - strand, within MPMX19_05025 at 511.561 kb on + strand, within MPMX19_05025 at 511.561 kb on + strand, within MPMX19_05025 at 511.561 kb on + strand, within MPMX19_05025 at 511.561 kb on + strand, within MPMX19_05025 at 511.562 kb on - strand, within MPMX19_05025 at 511.562 kb on - strand, within MPMX19_05025 at 511.562 kb on - strand, within MPMX19_05025 at 511.562 kb on - strand, within MPMX19_05025 at 511.562 kb on - strand, within MPMX19_05025 at 511.562 kb on - strand, within MPMX19_05025 at 511.562 kb on - strand, within MPMX19_05025 at 511.562 kb on - strand, within MPMX19_05025 at 511.696 kb on + strand at 511.696 kb on + strand at 511.696 kb on + strand at 511.697 kb on - strand at 511.697 kb on - strand at 511.705 kb on + strand at 511.705 kb on + strand at 511.705 kb on + strand at 511.706 kb on - strand at 511.706 kb on - strand at 511.711 kb on + strand at 511.711 kb on + strand at 511.711 kb on + strand at 511.750 kb on + strand at 511.750 kb on + strand at 511.750 kb on + strand at 511.780 kb on - strand at 512.085 kb on + strand, within MPMX19_05026 at 512.085 kb on + strand, within MPMX19_05026 at 512.085 kb on + strand, within MPMX19_05026 at 512.085 kb on + strand, within MPMX19_05026 at 512.085 kb on + strand, within MPMX19_05026 at 512.085 kb on + strand, within MPMX19_05026 at 512.085 kb on + strand, within MPMX19_05026 at 512.085 kb on + strand, within MPMX19_05026 at 512.085 kb on + strand, within MPMX19_05026 at 512.085 kb on + strand, within MPMX19_05026 at 512.085 kb on + strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.086 kb on - strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.175 kb on + strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.176 kb on - strand, within MPMX19_05026 at 512.397 kb on + strand, within MPMX19_05026 at 512.397 kb on + strand, within MPMX19_05026 at 512.398 kb on - strand, within MPMX19_05026 at 512.398 kb on - strand, within MPMX19_05026 at 512.398 kb on - strand, within MPMX19_05026 at 512.398 kb on - strand, within MPMX19_05026 at 512.514 kb on + strand at 512.514 kb on + strand at 512.515 kb on - strand at 512.520 kb on + strand at 512.521 kb on - strand at 512.582 kb on - strand at 512.639 kb on + strand at 512.640 kb on - strand at 512.830 kb on - strand, within MPMX19_05027 at 512.830 kb on - strand, within MPMX19_05027 at 512.830 kb on - strand, within MPMX19_05027 at 512.830 kb on - strand, within MPMX19_05027 at 512.830 kb on - strand, within MPMX19_05027 at 512.833 kb on - strand, within MPMX19_05027 at 512.833 kb on - strand, within MPMX19_05027 at 512.833 kb on - strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.097 kb on + strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.098 kb on - strand, within MPMX19_05027 at 513.297 kb on + strand at 513.297 kb on + strand at 513.297 kb on + strand at 513.297 kb on + strand at 513.297 kb on + strand at 513.297 kb on + strand at 513.297 kb on + strand at 513.298 kb on - strand at 513.298 kb on - strand at 513.298 kb on - strand at 513.298 kb on - strand at 513.298 kb on - strand at 513.298 kb on - strand at 513.298 kb on - strand at 513.298 kb on - strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.299 kb on + strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.300 kb on - strand at 513.398 kb on - strand at 513.398 kb on - strand at 513.398 kb on - strand at 513.398 kb on - strand at 513.398 kb on - strand at 513.495 kb on + strand at 513.495 kb on + strand at 513.495 kb on + strand at 513.495 kb on + strand at 513.496 kb on - strand at 513.496 kb on - strand at 513.496 kb on - strand at 513.496 kb on - strand at 513.496 kb on - strand at 513.509 kb on + strand at 513.509 kb on + strand at 513.509 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 510,853 + MPMX19_05025 0.11 -0.5 510,853 + MPMX19_05025 0.11 -0.9 510,854 - MPMX19_05025 0.11 -1.2 510,854 - MPMX19_05025 0.11 -1.0 510,979 + MPMX19_05025 0.24 +0.3 510,980 - MPMX19_05025 0.24 -0.8 510,980 - MPMX19_05025 0.24 +1.0 510,980 - MPMX19_05025 0.24 +0.1 510,980 - MPMX19_05025 0.24 -0.1 510,980 - MPMX19_05025 0.24 +1.0 511,003 + MPMX19_05025 0.26 -0.7 511,003 + MPMX19_05025 0.26 -0.5 511,003 + MPMX19_05025 0.26 -0.7 511,003 + MPMX19_05025 0.26 -0.4 511,004 - MPMX19_05025 0.26 +0.8 511,004 - MPMX19_05025 0.26 -1.5 511,004 - MPMX19_05025 0.26 +1.0 511,004 - MPMX19_05025 0.26 +0.1 511,004 - MPMX19_05025 0.26 +0.0 511,004 - MPMX19_05025 0.26 -0.1 511,004 - MPMX19_05025 0.26 +0.3 511,004 - MPMX19_05025 0.26 +1.3 511,004 - MPMX19_05025 0.26 +0.2 511,004 - MPMX19_05025 0.26 -0.6 511,004 - MPMX19_05025 0.26 -1.2 511,004 - MPMX19_05025 0.26 +0.1 511,180 + MPMX19_05025 0.43 +0.6 511,180 + MPMX19_05025 0.43 -1.5 511,180 + MPMX19_05025 0.43 -1.2 511,180 + MPMX19_05025 0.43 -0.5 511,180 + MPMX19_05025 0.43 +0.0 511,181 - MPMX19_05025 0.43 +0.2 511,181 - MPMX19_05025 0.43 +0.2 511,261 + MPMX19_05025 0.51 +1.4 511,262 - MPMX19_05025 0.51 -1.4 511,262 - MPMX19_05025 0.51 -1.5 511,561 + MPMX19_05025 0.81 -1.2 511,561 + MPMX19_05025 0.81 -0.3 511,561 + MPMX19_05025 0.81 +0.5 511,561 + MPMX19_05025 0.81 -0.1 511,562 - MPMX19_05025 0.81 -0.5 511,562 - MPMX19_05025 0.81 +0.0 511,562 - MPMX19_05025 0.81 -2.1 511,562 - MPMX19_05025 0.81 +0.9 511,562 - MPMX19_05025 0.81 +0.4 511,562 - MPMX19_05025 0.81 -1.4 511,562 - MPMX19_05025 0.81 -0.6 511,562 - MPMX19_05025 0.81 +0.1 511,696 + -0.2 511,696 + -0.3 511,696 + +0.2 511,697 - -0.5 511,697 - +0.2 511,705 + +0.3 511,705 + -0.3 511,705 + -0.6 511,706 - +0.4 511,706 - -1.0 511,711 + +0.6 511,711 + -0.5 511,711 + +0.6 511,750 + -1.4 511,750 + +0.9 511,750 + -0.2 511,780 - +0.3 512,085 + MPMX19_05026 0.38 +0.9 512,085 + MPMX19_05026 0.38 +0.3 512,085 + MPMX19_05026 0.38 +0.3 512,085 + MPMX19_05026 0.38 +0.0 512,085 + MPMX19_05026 0.38 -0.3 512,085 + MPMX19_05026 0.38 +1.1 512,085 + MPMX19_05026 0.38 -0.3 512,085 + MPMX19_05026 0.38 +2.6 512,085 + MPMX19_05026 0.38 -0.2 512,085 + MPMX19_05026 0.38 +2.2 512,085 + MPMX19_05026 0.38 +0.1 512,086 - MPMX19_05026 0.39 +0.6 512,086 - MPMX19_05026 0.39 +0.2 512,086 - MPMX19_05026 0.39 +1.5 512,086 - MPMX19_05026 0.39 -1.7 512,086 - MPMX19_05026 0.39 -0.7 512,086 - MPMX19_05026 0.39 -0.7 512,086 - MPMX19_05026 0.39 -0.1 512,086 - MPMX19_05026 0.39 +0.7 512,086 - MPMX19_05026 0.39 -0.2 512,086 - MPMX19_05026 0.39 +2.2 512,086 - MPMX19_05026 0.39 +0.1 512,086 - MPMX19_05026 0.39 -1.0 512,086 - MPMX19_05026 0.39 -0.4 512,086 - MPMX19_05026 0.39 -0.1 512,175 + MPMX19_05026 0.51 -0.5 512,175 + MPMX19_05026 0.51 -0.1 512,175 + MPMX19_05026 0.51 -0.7 512,175 + MPMX19_05026 0.51 -1.6 512,175 + MPMX19_05026 0.51 +0.2 512,175 + MPMX19_05026 0.51 -0.8 512,175 + MPMX19_05026 0.51 -0.7 512,175 + MPMX19_05026 0.51 +1.0 512,175 + MPMX19_05026 0.51 -0.9 512,175 + MPMX19_05026 0.51 -0.4 512,175 + MPMX19_05026 0.51 -0.2 512,175 + MPMX19_05026 0.51 -0.4 512,175 + MPMX19_05026 0.51 -0.3 512,176 - MPMX19_05026 0.51 +1.3 512,176 - MPMX19_05026 0.51 -0.0 512,176 - MPMX19_05026 0.51 -0.7 512,176 - MPMX19_05026 0.51 -0.8 512,176 - MPMX19_05026 0.51 +0.9 512,176 - MPMX19_05026 0.51 -1.2 512,176 - MPMX19_05026 0.51 +0.0 512,176 - MPMX19_05026 0.51 +0.4 512,176 - MPMX19_05026 0.51 -0.4 512,176 - MPMX19_05026 0.51 +0.6 512,176 - MPMX19_05026 0.51 +0.5 512,176 - MPMX19_05026 0.51 +0.7 512,176 - MPMX19_05026 0.51 +0.1 512,176 - MPMX19_05026 0.51 -0.6 512,176 - MPMX19_05026 0.51 -0.4 512,176 - MPMX19_05026 0.51 -1.7 512,176 - MPMX19_05026 0.51 +0.5 512,176 - MPMX19_05026 0.51 -1.5 512,397 + MPMX19_05026 0.83 -2.1 512,397 + MPMX19_05026 0.83 +0.8 512,398 - MPMX19_05026 0.83 +0.2 512,398 - MPMX19_05026 0.83 -1.8 512,398 - MPMX19_05026 0.83 -2.6 512,398 - MPMX19_05026 0.83 -0.7 512,514 + +0.6 512,514 + -1.4 512,515 - -1.0 512,520 + -0.5 512,521 - -0.5 512,582 - -1.4 512,639 + -0.5 512,640 - -1.2 512,830 - MPMX19_05027 0.29 -1.2 512,830 - MPMX19_05027 0.29 +0.3 512,830 - MPMX19_05027 0.29 -0.7 512,830 - MPMX19_05027 0.29 -0.1 512,830 - MPMX19_05027 0.29 -1.0 512,833 - MPMX19_05027 0.29 -0.1 512,833 - MPMX19_05027 0.29 -1.5 512,833 - MPMX19_05027 0.29 -0.1 513,097 + MPMX19_05027 0.66 +1.0 513,097 + MPMX19_05027 0.66 +1.3 513,097 + MPMX19_05027 0.66 -0.7 513,097 + MPMX19_05027 0.66 -0.5 513,097 + MPMX19_05027 0.66 +0.2 513,097 + MPMX19_05027 0.66 -0.4 513,097 + MPMX19_05027 0.66 +0.3 513,097 + MPMX19_05027 0.66 +0.4 513,097 + MPMX19_05027 0.66 -0.2 513,097 + MPMX19_05027 0.66 -0.2 513,097 + MPMX19_05027 0.66 +1.2 513,097 + MPMX19_05027 0.66 -1.7 513,097 + MPMX19_05027 0.66 -2.0 513,097 + MPMX19_05027 0.66 +0.8 513,097 + MPMX19_05027 0.66 -0.8 513,097 + MPMX19_05027 0.66 -0.1 513,097 + MPMX19_05027 0.66 -1.8 513,097 + MPMX19_05027 0.66 -0.2 513,097 + MPMX19_05027 0.66 -1.1 513,097 + MPMX19_05027 0.66 -0.9 513,097 + MPMX19_05027 0.66 -0.8 513,097 + MPMX19_05027 0.66 +0.9 513,098 - MPMX19_05027 0.66 -0.5 513,098 - MPMX19_05027 0.66 -1.4 513,098 - MPMX19_05027 0.66 +0.3 513,098 - MPMX19_05027 0.66 +0.0 513,098 - MPMX19_05027 0.66 -0.0 513,098 - MPMX19_05027 0.66 -1.8 513,098 - MPMX19_05027 0.66 -1.5 513,098 - MPMX19_05027 0.66 -0.5 513,098 - MPMX19_05027 0.66 -0.1 513,098 - MPMX19_05027 0.66 +0.0 513,098 - MPMX19_05027 0.66 +0.4 513,098 - MPMX19_05027 0.66 -0.0 513,098 - MPMX19_05027 0.66 +0.1 513,098 - MPMX19_05027 0.66 -0.8 513,098 - MPMX19_05027 0.66 -0.7 513,098 - MPMX19_05027 0.66 -1.0 513,098 - MPMX19_05027 0.66 +0.5 513,098 - MPMX19_05027 0.66 -0.8 513,098 - MPMX19_05027 0.66 +0.1 513,098 - MPMX19_05027 0.66 -0.4 513,098 - MPMX19_05027 0.66 +0.6 513,098 - MPMX19_05027 0.66 -0.5 513,098 - MPMX19_05027 0.66 -2.1 513,098 - MPMX19_05027 0.66 -0.9 513,098 - MPMX19_05027 0.66 -0.4 513,297 + +1.1 513,297 + -1.0 513,297 + -0.5 513,297 + -1.5 513,297 + -1.0 513,297 + -0.3 513,297 + -1.9 513,298 - -1.4 513,298 - -1.0 513,298 - -0.2 513,298 - -0.3 513,298 - -0.1 513,298 - +0.6 513,298 - -0.2 513,298 - -0.3 513,299 + -0.7 513,299 + -0.4 513,299 + +0.5 513,299 + -1.5 513,299 + +0.8 513,299 + -1.0 513,299 + -1.7 513,299 + -2.5 513,299 + -1.2 513,299 + +1.4 513,299 + -1.8 513,299 + +0.5 513,299 + +2.6 513,299 + -0.2 513,299 + +2.0 513,299 + +0.3 513,299 + -0.2 513,299 + -0.2 513,299 + -0.2 513,299 + +0.2 513,299 + -1.8 513,300 - -1.2 513,300 - +1.2 513,300 - +0.7 513,300 - -0.7 513,300 - +0.6 513,300 - -1.4 513,300 - -0.4 513,300 - -0.0 513,300 - -1.9 513,300 - -1.0 513,300 - +0.2 513,300 - +0.9 513,300 - -1.0 513,300 - +0.8 513,300 - -0.1 513,300 - -0.2 513,300 - +0.4 513,300 - -1.0 513,300 - -0.1 513,398 - +0.0 513,398 - +0.3 513,398 - +0.0 513,398 - -0.9 513,398 - +0.4 513,495 + +1.6 513,495 + +0.1 513,495 + -1.3 513,495 + -0.2 513,496 - -1.7 513,496 - +0.5 513,496 - -0.7 513,496 - +0.0 513,496 - -0.6 513,509 + -1.2 513,509 + -0.6 513,509 + -0.3
Or see this region's nucleotide sequence