Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04634 and MPMX19_04635 overlap by 16 nucleotides MPMX19_04635 and MPMX19_04636 are separated by 10 nucleotides
MPMX19_04634: MPMX19_04634 - hypothetical protein, at 11,592 to 13,109
_04634
MPMX19_04635: MPMX19_04635 - D-inositol-3-phosphate glycosyltransferase, at 13,094 to 14,281
_04635
MPMX19_04636: MPMX19_04636 - D-inositol-3-phosphate glycosyltransferase, at 14,292 to 15,551
_04636
Position (kb) 13
14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 12.120 kb on + strand, within MPMX19_04634 at 12.120 kb on + strand, within MPMX19_04634 at 12.120 kb on + strand, within MPMX19_04634 at 12.120 kb on + strand, within MPMX19_04634 at 12.120 kb on + strand, within MPMX19_04634 at 12.120 kb on + strand, within MPMX19_04634 at 12.120 kb on + strand, within MPMX19_04634 at 12.120 kb on + strand, within MPMX19_04634 at 12.120 kb on + strand, within MPMX19_04634 at 12.121 kb on - strand, within MPMX19_04634 at 12.121 kb on - strand, within MPMX19_04634 at 12.121 kb on - strand, within MPMX19_04634 at 12.121 kb on - strand, within MPMX19_04634 at 12.145 kb on - strand, within MPMX19_04634 at 12.208 kb on - strand, within MPMX19_04634 at 12.222 kb on + strand, within MPMX19_04634 at 12.222 kb on + strand, within MPMX19_04634 at 12.222 kb on + strand, within MPMX19_04634 at 12.223 kb on - strand, within MPMX19_04634 at 12.223 kb on - strand, within MPMX19_04634 at 12.223 kb on - strand, within MPMX19_04634 at 12.642 kb on + strand, within MPMX19_04634 at 12.642 kb on + strand, within MPMX19_04634 at 12.642 kb on + strand, within MPMX19_04634 at 12.643 kb on - strand, within MPMX19_04634 at 12.643 kb on - strand, within MPMX19_04634 at 12.643 kb on - strand, within MPMX19_04634 at 12.643 kb on - strand, within MPMX19_04634 at 12.643 kb on - strand, within MPMX19_04634 at 12.643 kb on - strand, within MPMX19_04634 at 12.663 kb on + strand, within MPMX19_04634 at 12.663 kb on + strand, within MPMX19_04634 at 12.663 kb on + strand, within MPMX19_04634 at 12.664 kb on - strand, within MPMX19_04634 at 12.664 kb on - strand, within MPMX19_04634 at 12.664 kb on - strand, within MPMX19_04634 at 12.717 kb on - strand, within MPMX19_04634 at 12.834 kb on + strand, within MPMX19_04634 at 12.834 kb on + strand, within MPMX19_04634 at 12.835 kb on - strand, within MPMX19_04634 at 12.835 kb on - strand, within MPMX19_04634 at 12.835 kb on - strand, within MPMX19_04634 at 12.835 kb on - strand, within MPMX19_04634 at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.211 kb on + strand at 13.212 kb on - strand at 13.212 kb on - strand at 13.212 kb on - strand at 13.212 kb on - strand at 13.212 kb on - strand at 13.212 kb on - strand at 13.212 kb on - strand at 13.212 kb on - strand at 13.212 kb on - strand at 13.212 kb on - strand at 13.562 kb on + strand, within MPMX19_04635 at 13.562 kb on + strand, within MPMX19_04635 at 13.562 kb on + strand, within MPMX19_04635 at 13.562 kb on + strand, within MPMX19_04635 at 13.562 kb on + strand, within MPMX19_04635 at 13.562 kb on + strand, within MPMX19_04635 at 13.562 kb on + strand, within MPMX19_04635 at 13.563 kb on - strand, within MPMX19_04635 at 13.563 kb on - strand, within MPMX19_04635 at 13.563 kb on - strand, within MPMX19_04635 at 13.563 kb on - strand, within MPMX19_04635 at 13.625 kb on + strand, within MPMX19_04635 at 13.626 kb on - strand, within MPMX19_04635 at 13.626 kb on - strand, within MPMX19_04635 at 13.682 kb on + strand, within MPMX19_04635 at 13.962 kb on - strand, within MPMX19_04635 at 14.291 kb on + strand at 14.291 kb on + strand at 14.292 kb on - strand at 14.297 kb on + strand at 14.297 kb on + strand at 14.297 kb on + strand at 14.297 kb on + strand at 14.297 kb on + strand at 14.297 kb on + strand at 14.297 kb on + strand at 14.297 kb on + strand at 14.297 kb on + strand at 14.297 kb on + strand at 14.297 kb on - strand at 14.298 kb on - strand at 14.298 kb on - strand at 14.298 kb on - strand at 14.298 kb on - strand at 14.682 kb on + strand, within MPMX19_04636 at 14.682 kb on + strand, within MPMX19_04636 at 15.231 kb on + strand, within MPMX19_04636 at 15.232 kb on - strand, within MPMX19_04636 at 15.232 kb on - strand, within MPMX19_04636 at 15.255 kb on + strand, within MPMX19_04636 at 15.255 kb on + strand, within MPMX19_04636 at 15.256 kb on - strand, within MPMX19_04636
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 12,120 + MPMX19_04634 0.35 -3.1 12,120 + MPMX19_04634 0.35 -0.4 12,120 + MPMX19_04634 0.35 -0.7 12,120 + MPMX19_04634 0.35 -0.8 12,120 + MPMX19_04634 0.35 -0.6 12,120 + MPMX19_04634 0.35 -0.7 12,120 + MPMX19_04634 0.35 -0.1 12,120 + MPMX19_04634 0.35 -0.1 12,120 + MPMX19_04634 0.35 +0.3 12,121 - MPMX19_04634 0.35 +1.6 12,121 - MPMX19_04634 0.35 -0.7 12,121 - MPMX19_04634 0.35 -1.5 12,121 - MPMX19_04634 0.35 -0.2 12,145 - MPMX19_04634 0.36 -0.4 12,208 - MPMX19_04634 0.41 -0.7 12,222 + MPMX19_04634 0.42 -1.1 12,222 + MPMX19_04634 0.42 -0.9 12,222 + MPMX19_04634 0.42 +1.7 12,223 - MPMX19_04634 0.42 +0.2 12,223 - MPMX19_04634 0.42 -0.3 12,223 - MPMX19_04634 0.42 -0.7 12,642 + MPMX19_04634 0.69 -0.0 12,642 + MPMX19_04634 0.69 -2.2 12,642 + MPMX19_04634 0.69 +1.4 12,643 - MPMX19_04634 0.69 -1.2 12,643 - MPMX19_04634 0.69 -2.2 12,643 - MPMX19_04634 0.69 -0.7 12,643 - MPMX19_04634 0.69 +0.5 12,643 - MPMX19_04634 0.69 +0.0 12,643 - MPMX19_04634 0.69 -0.2 12,663 + MPMX19_04634 0.71 -1.1 12,663 + MPMX19_04634 0.71 +0.0 12,663 + MPMX19_04634 0.71 -0.9 12,664 - MPMX19_04634 0.71 -0.3 12,664 - MPMX19_04634 0.71 +0.8 12,664 - MPMX19_04634 0.71 +0.1 12,717 - MPMX19_04634 0.74 -1.9 12,834 + MPMX19_04634 0.82 -0.3 12,834 + MPMX19_04634 0.82 +0.2 12,835 - MPMX19_04634 0.82 -1.1 12,835 - MPMX19_04634 0.82 -0.3 12,835 - MPMX19_04634 0.82 -0.2 12,835 - MPMX19_04634 0.82 +0.4 13,211 + -1.2 13,211 + -0.4 13,211 + -2.2 13,211 + -1.3 13,211 + -0.5 13,211 + -0.0 13,211 + -0.2 13,211 + +0.1 13,211 + -1.4 13,211 + -3.0 13,211 + -0.3 13,211 + +0.6 13,211 + +1.3 13,211 + +1.3 13,211 + -1.4 13,211 + +0.2 13,211 + -0.4 13,211 + -0.7 13,212 - -0.7 13,212 - -0.8 13,212 - -0.4 13,212 - -1.0 13,212 - +1.6 13,212 - -1.4 13,212 - -1.5 13,212 - -0.4 13,212 - -0.3 13,212 - -0.4 13,562 + MPMX19_04635 0.39 +0.6 13,562 + MPMX19_04635 0.39 +1.3 13,562 + MPMX19_04635 0.39 -1.1 13,562 + MPMX19_04635 0.39 +0.2 13,562 + MPMX19_04635 0.39 +0.5 13,562 + MPMX19_04635 0.39 -1.3 13,562 + MPMX19_04635 0.39 +0.3 13,563 - MPMX19_04635 0.39 -0.1 13,563 - MPMX19_04635 0.39 -0.4 13,563 - MPMX19_04635 0.39 +0.0 13,563 - MPMX19_04635 0.39 -1.1 13,625 + MPMX19_04635 0.45 +0.4 13,626 - MPMX19_04635 0.45 +0.7 13,626 - MPMX19_04635 0.45 -0.2 13,682 + MPMX19_04635 0.49 -0.5 13,962 - MPMX19_04635 0.73 +0.0 14,291 + +1.2 14,291 + -1.7 14,292 - -1.0 14,297 + -0.5 14,297 + +0.8 14,297 + -0.4 14,297 + -0.1 14,297 + -0.9 14,297 + -1.0 14,297 + +1.3 14,297 + -0.3 14,297 + -0.5 14,297 + -1.0 14,297 - +0.4 14,298 - -0.2 14,298 - -0.4 14,298 - -1.9 14,298 - +0.3 14,682 + MPMX19_04636 0.31 +0.0 14,682 + MPMX19_04636 0.31 -0.7 15,231 + MPMX19_04636 0.75 +0.4 15,232 - MPMX19_04636 0.75 -0.4 15,232 - MPMX19_04636 0.75 +0.3 15,255 + MPMX19_04636 0.76 -0.2 15,255 + MPMX19_04636 0.76 -1.2 15,256 - MPMX19_04636 0.77 -0.9
Or see this region's nucleotide sequence