Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04595

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
977,829	+				+0.9
977,829	+				-0.8
977,829	+				-0.3
977,829	+				-0.2
977,829	+				+1.0
977,829	+				+0.7
977,829	+				+1.0
977,829	+				+0.4
977,829	+				-1.6
977,829	+				-1.0
977,829	+				-0.6
977,830	-				-0.6
977,830	-				-0.7
977,830	-				+0.0
977,830	-				+0.7
977,856	+				-1.7
977,856	+				-1.7
977,856	+				-0.3
977,856	+				-0.5
977,857	-				-1.5
977,888	+				+0.2
977,888	+				+1.2
977,889	-				-1.1
977,889	-				-0.3
977,989	+				-0.3
977,989	+				+0.2
977,989	+				+0.2
977,989	+				-0.1
977,989	+				+0.3
977,990	-				+0.2
977,990	-				-0.0
977,990	-				-1.7
977,990	-				+0.5
977,990	-				+0.4
977,990	-				-1.7
978,343	+		MPMX19_04594	0.57	-0.7
978,343	+		MPMX19_04594	0.57	-0.5
978,343	+		MPMX19_04594	0.57	-1.0
978,343	+		MPMX19_04594	0.57	+0.6
978,343	+		MPMX19_04594	0.57	-1.3
978,343	+		MPMX19_04594	0.57	-0.0
978,343	+		MPMX19_04594	0.57	-0.5
978,344	-		MPMX19_04594	0.57	-1.4
978,344	-		MPMX19_04594	0.57	-0.6
978,344	-		MPMX19_04594	0.57	-1.1
978,344	-		MPMX19_04594	0.57	-0.0
978,489	+		MPMX19_04594	0.78	+0.0
978,489	+		MPMX19_04594	0.78	-0.1
978,489	+		MPMX19_04594	0.78	-0.1
978,489	+		MPMX19_04594	0.78	-1.1
978,489	+		MPMX19_04594	0.78	-0.4
978,490	-		MPMX19_04594	0.78	-0.2
978,490	-		MPMX19_04594	0.78	+1.5
978,490	-		MPMX19_04594	0.78	-0.4
978,490	-		MPMX19_04594	0.78	-1.4
978,490	-		MPMX19_04594	0.78	+0.0
978,490	-		MPMX19_04594	0.78	-0.6
978,502	+		MPMX19_04594	0.80	+0.9
978,502	+		MPMX19_04594	0.80	-1.0
978,502	+		MPMX19_04594	0.80	-0.7
978,502	+		MPMX19_04594	0.80	-2.3
978,502	+		MPMX19_04594	0.80	-0.6
978,502	+		MPMX19_04594	0.80	-0.4
978,502	+		MPMX19_04594	0.80	+1.3
978,503	-		MPMX19_04594	0.80	-0.9
978,503	-		MPMX19_04594	0.80	-1.4
978,503	-		MPMX19_04594	0.80	+0.5
978,503	-		MPMX19_04594	0.80	-0.5
978,503	-		MPMX19_04594	0.80	-1.2
978,503	-		MPMX19_04594	0.80	+0.6
978,503	-		MPMX19_04594	0.80	-0.1
978,503	-		MPMX19_04594	0.80	+0.6
978,503	-		MPMX19_04594	0.80	-0.7
978,503	-		MPMX19_04594	0.80	-0.5
978,503	-		MPMX19_04594	0.80	-0.2
978,627	+				-0.1
978,627	+				-0.3
978,628	-				-0.1
978,628	-				-0.5
978,628	-				+0.7
978,628	-				-0.4
978,667	+				+0.5
978,692	+				+0.6
978,692	+				-0.8
978,693	-				-0.3
978,693	-				-0.8
978,693	-				-1.7
978,729	+				-0.3
978,730	-				-0.5
978,730	-				+0.3
978,750	+				-0.7
978,751	-				-1.7
978,751	-				-0.7
978,908	+				-2.2
978,908	+				-0.5
978,908	+				-0.2
978,909	-				-1.0
978,909	-				+1.0
979,010	+		MPMX19_04595	0.14	-1.3
979,010	+		MPMX19_04595	0.14	+0.5
979,010	+		MPMX19_04595	0.14	-0.9
979,010	+		MPMX19_04595	0.14	-0.4
979,011	-		MPMX19_04595	0.14	-0.1
979,011	-		MPMX19_04595	0.14	-1.3
979,011	-		MPMX19_04595	0.14	+1.0
979,011	-		MPMX19_04595	0.14	-1.7
979,064	+		MPMX19_04595	0.18	-1.5
979,065	-		MPMX19_04595	0.18	-1.6
979,065	-		MPMX19_04595	0.18	+0.6
979,133	+		MPMX19_04595	0.23	-1.4
979,133	+		MPMX19_04595	0.23	-0.6
979,133	+		MPMX19_04595	0.23	-0.5
979,133	+		MPMX19_04595	0.23	-0.8
979,133	+		MPMX19_04595	0.23	-0.9
979,134	-		MPMX19_04595	0.23	+0.6
979,134	-		MPMX19_04595	0.23	-0.7
979,181	+		MPMX19_04595	0.27	+0.2
979,181	+		MPMX19_04595	0.27	-0.8
979,181	+		MPMX19_04595	0.27	+1.3
979,182	-		MPMX19_04595	0.27	+0.7
979,182	-		MPMX19_04595	0.27	-0.3
979,182	-		MPMX19_04595	0.27	-0.4
979,182	-		MPMX19_04595	0.27	+1.7
979,217	+		MPMX19_04595	0.29	-0.9
979,217	+		MPMX19_04595	0.29	-0.7
979,217	+		MPMX19_04595	0.29	+1.0
979,218	-		MPMX19_04595	0.29	-0.7
979,244	+		MPMX19_04595	0.31	-0.3
979,244	+		MPMX19_04595	0.31	+0.2
979,244	+		MPMX19_04595	0.31	+0.7
979,245	-		MPMX19_04595	0.31	-0.3
979,245	-		MPMX19_04595	0.31	+0.9
979,245	-		MPMX19_04595	0.31	-1.4
979,289	+		MPMX19_04595	0.34	-0.4
979,289	+		MPMX19_04595	0.34	-0.6
979,289	+		MPMX19_04595	0.34	-1.7
979,289	+		MPMX19_04595	0.34	-0.8
979,289	+		MPMX19_04595	0.34	+0.2
979,289	+		MPMX19_04595	0.34	+0.2
979,290	-		MPMX19_04595	0.35	-0.6
979,290	-		MPMX19_04595	0.35	+0.0
979,290	-		MPMX19_04595	0.35	-0.4
979,290	-		MPMX19_04595	0.35	+0.7
979,346	+		MPMX19_04595	0.39	-1.2
979,346	+		MPMX19_04595	0.39	-0.6
979,811	+		MPMX19_04595	0.72	-0.3
979,812	-		MPMX19_04595	0.72	-1.8
979,898	+		MPMX19_04595	0.79	-0.5
979,928	+		MPMX19_04595	0.81	+0.0
979,928	+		MPMX19_04595	0.81	-0.8
979,928	+		MPMX19_04595	0.81	-0.5
979,929	-		MPMX19_04595	0.81	-1.0
979,929	-		MPMX19_04595	0.81	+1.1
980,010	+		MPMX19_04595	0.87	-1.7
980,140	+				-2.3
980,140	+				+0.2
980,141	-				-0.1
980,141	-				-0.6
980,313	+				-0.1
980,313	+				+0.4
980,314	-				-1.6
980,314	-				+0.9
980,619	+		MPMX19_04596	0.42	-1.7
980,619	+		MPMX19_04596	0.42	-0.3
980,619	+		MPMX19_04596	0.42	+0.2
980,620	-		MPMX19_04596	0.42	+0.7
980,620	-		MPMX19_04596	0.42	+0.5
980,883	+		MPMX19_04596	0.80	-0.2
980,883	+		MPMX19_04596	0.80	-0.7
980,884	-		MPMX19_04596	0.80	+0.0
980,884	-		MPMX19_04596	0.80	+0.7
980,898	+		MPMX19_04596	0.82	+0.1
980,898	+		MPMX19_04596	0.82	-0.8
980,898	+		MPMX19_04596	0.82	+0.7
980,898	+		MPMX19_04596	0.82	-1.1
980,898	+		MPMX19_04596	0.82	-1.5
980,898	+		MPMX19_04596	0.82	-0.6
980,899	-		MPMX19_04596	0.82	-1.1
980,899	-		MPMX19_04596	0.82	-0.1
980,899	-		MPMX19_04596	0.82	-0.5
980,899	-		MPMX19_04596	0.82	-0.2
980,899	-		MPMX19_04596	0.82	+0.2
980,899	-		MPMX19_04596	0.82	-0.0
980,997	+				+0.5
980,997	+				-0.4
980,998	-				+0.1
980,998	-				+0.0