Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04182

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
507,560	+		MPMX19_04181	0.21	-0.6
507,560	+		MPMX19_04181	0.21	-0.3
507,560	+		MPMX19_04181	0.21	-0.9
507,561	-		MPMX19_04181	0.21	+0.2
507,561	-		MPMX19_04181	0.21	-1.0
507,662	+		MPMX19_04181	0.31	-2.3
507,662	+		MPMX19_04181	0.31	-0.3
507,662	+		MPMX19_04181	0.31	-1.0
507,662	+		MPMX19_04181	0.31	-0.3
507,662	+		MPMX19_04181	0.31	-0.5
507,662	+		MPMX19_04181	0.31	-0.3
507,662	+		MPMX19_04181	0.31	-1.2
507,663	-		MPMX19_04181	0.31	-0.1
507,663	-		MPMX19_04181	0.31	+0.3
507,663	-		MPMX19_04181	0.31	-0.1
507,663	-		MPMX19_04181	0.31	-0.1
507,663	-		MPMX19_04181	0.31	-1.9
507,663	-		MPMX19_04181	0.31	-0.7
507,663	-		MPMX19_04181	0.31	-1.0
507,663	-		MPMX19_04181	0.31	-0.1
507,663	-		MPMX19_04181	0.31	-0.5
507,854	+		MPMX19_04181	0.50	-0.1
507,854	+		MPMX19_04181	0.50	+0.5
507,855	-		MPMX19_04181	0.51	+1.7
507,855	-		MPMX19_04181	0.51	-0.8
507,855	-		MPMX19_04181	0.51	-0.2
507,855	-		MPMX19_04181	0.51	-1.1
508,269	+				-0.7
508,269	+				-0.0
508,270	-				+0.4
508,410	+				-0.7
508,410	+				-0.5
508,435	-				+1.7
508,446	+				+0.9
508,464	+				-1.7
508,464	+				-0.7
508,464	+				+0.7
508,464	+				-1.7
508,464	+				-1.4
508,465	-				-0.3
508,465	-				-0.2
508,465	-				-0.3
508,465	-				+0.1
508,465	-				-1.2
508,866	+		MPMX19_04182	0.34	-0.4
508,866	+		MPMX19_04182	0.34	-0.1
508,867	-		MPMX19_04182	0.34	+0.1
508,867	-		MPMX19_04182	0.34	+0.1
508,867	-		MPMX19_04182	0.34	-0.7
508,881	+		MPMX19_04182	0.35	-0.8
508,882	-		MPMX19_04182	0.35	+0.3
508,882	-		MPMX19_04182	0.35	+0.2
508,882	-		MPMX19_04182	0.35	+0.4
508,882	-		MPMX19_04182	0.35	-1.8
508,882	-		MPMX19_04182	0.35	-0.9
508,882	-		MPMX19_04182	0.35	+0.8
508,971	+		MPMX19_04182	0.42	+0.1
508,971	+		MPMX19_04182	0.42	-1.8
508,972	-		MPMX19_04182	0.42	-1.0
508,972	-		MPMX19_04182	0.42	-1.1
508,983	+		MPMX19_04182	0.43	+0.7
508,983	+		MPMX19_04182	0.43	-0.5
508,984	-		MPMX19_04182	0.43	+1.0
509,604	+		MPMX19_04182	0.89	-0.4
509,604	+		MPMX19_04182	0.89	+1.3
509,604	+		MPMX19_04182	0.89	-0.0
509,604	+		MPMX19_04182	0.89	-0.9
509,604	+		MPMX19_04182	0.89	+0.9
509,604	+		MPMX19_04182	0.89	+0.1
509,604	+		MPMX19_04182	0.89	+0.7
509,604	+		MPMX19_04182	0.89	-0.1
509,604	+		MPMX19_04182	0.89	-0.8
509,604	+		MPMX19_04182	0.89	-0.6
509,604	+		MPMX19_04182	0.89	-0.0
509,604	+		MPMX19_04182	0.89	-0.9
509,604	+		MPMX19_04182	0.89	-0.8
509,604	+		MPMX19_04182	0.89	-0.2
509,604	+		MPMX19_04182	0.89	-0.4
509,605	-		MPMX19_04182	0.89	-0.1
509,605	-		MPMX19_04182	0.89	+0.2
509,605	-		MPMX19_04182	0.89	+0.4
509,605	-		MPMX19_04182	0.89	-1.3
509,605	-		MPMX19_04182	0.89	-1.5
509,605	-		MPMX19_04182	0.89	+1.0
509,605	-		MPMX19_04182	0.89	-0.9
509,616	+		MPMX19_04182	0.90	-2.0
509,616	+		MPMX19_04182	0.90	-1.1
509,616	+		MPMX19_04182	0.90	+0.1
509,616	+		MPMX19_04182	0.90	-0.1
509,616	+		MPMX19_04182	0.90	-0.9
509,616	+		MPMX19_04182	0.90	-1.5
509,617	-		MPMX19_04182	0.90	-0.3
509,617	-		MPMX19_04182	0.90	+0.1
509,617	-		MPMX19_04182	0.90	+0.3
509,617	-		MPMX19_04182	0.90	+0.7
509,617	-		MPMX19_04182	0.90	-1.8
509,767	+				-0.7
509,778	-				-1.0
509,829	+				-0.2
509,830	-				+0.1
509,830	-				-0.8
509,846	+				+0.8
509,846	+				-0.6
509,846	+				+0.1
509,846	+				-1.8
509,847	-				-0.8
509,847	-				+0.5
509,847	-				-0.0
509,876	+				-1.5
510,006	+				-0.8
510,087	+				-2.0
510,087	+				-0.9
510,087	+				+0.8
510,087	+				-0.7
510,087	+				+0.3
510,087	+				+1.1
510,087	+				-0.3
510,087	+				-1.3
510,087	+				+0.7
510,087	+				-1.9
510,087	+				-0.5
510,087	+				+1.3
510,087	+				-1.7
510,087	+				-0.1
510,088	-				+0.3
510,088	-				-0.9
510,088	-				-0.1
510,088	-				-0.5
510,088	-				+0.8
510,088	-				-0.5
510,088	-				-0.8
510,088	-				-0.5
510,088	-				+0.6
510,088	-				+0.2
510,088	-				-0.2
510,088	-				-0.5
510,088	-				-0.3
510,225	+		MPMX19_04183	0.15	-1.5
510,225	+		MPMX19_04183	0.15	-0.4
510,225	+		MPMX19_04183	0.15	+0.7
510,225	+		MPMX19_04183	0.15	-2.1
510,225	+		MPMX19_04183	0.15	+0.6
510,225	+		MPMX19_04183	0.15	+1.3
510,225	+		MPMX19_04183	0.15	-0.8
510,225	+		MPMX19_04183	0.15	-0.9
510,225	+		MPMX19_04183	0.15	-0.5
510,225	+		MPMX19_04183	0.15	-2.0
510,225	+		MPMX19_04183	0.15	-1.0
510,225	+		MPMX19_04183	0.15	-0.4
510,225	+		MPMX19_04183	0.15	-0.2
510,225	+		MPMX19_04183	0.15	-0.7
510,225	+		MPMX19_04183	0.15	-1.1
510,225	+		MPMX19_04183	0.15	-1.3
510,225	+		MPMX19_04183	0.15	-0.7
510,225	+		MPMX19_04183	0.15	-1.0
510,225	+		MPMX19_04183	0.15	-1.1
510,225	+		MPMX19_04183	0.15	+0.1
510,225	+		MPMX19_04183	0.15	-0.9
510,226	-		MPMX19_04183	0.15	+0.2
510,226	-		MPMX19_04183	0.15	+0.0
510,226	-		MPMX19_04183	0.15	-0.1
510,226	-		MPMX19_04183	0.15	-0.1
510,226	-		MPMX19_04183	0.15	-0.5
510,226	-		MPMX19_04183	0.15	-1.1
510,226	-		MPMX19_04183	0.15	-1.4
510,226	-		MPMX19_04183	0.15	+0.7
510,226	-		MPMX19_04183	0.15	-1.4
510,226	-		MPMX19_04183	0.15	-1.4
510,226	-		MPMX19_04183	0.15	-0.9
510,226	-		MPMX19_04183	0.15	-0.5
510,354	+		MPMX19_04183	0.24	-0.9
510,354	+		MPMX19_04183	0.24	-1.3
510,354	+		MPMX19_04183	0.24	+1.1
510,354	+		MPMX19_04183	0.24	+0.5
510,354	+		MPMX19_04183	0.24	+0.3
510,354	+		MPMX19_04183	0.24	+0.5
510,354	+		MPMX19_04183	0.24	-0.3
510,354	+		MPMX19_04183	0.24	-1.5
510,354	+		MPMX19_04183	0.24	-1.1
510,354	+		MPMX19_04183	0.24	+0.1
510,355	-		MPMX19_04183	0.24	-0.5
510,355	-		MPMX19_04183	0.24	-0.3
510,355	-		MPMX19_04183	0.24	-0.1
510,355	-		MPMX19_04183	0.24	-0.3
510,355	-		MPMX19_04183	0.24	+0.3
510,355	-		MPMX19_04183	0.24	+0.8
510,355	-		MPMX19_04183	0.24	-1.7
510,355	-		MPMX19_04183	0.24	-1.5
510,355	-		MPMX19_04183	0.24	-0.8
510,355	-		MPMX19_04183	0.24	-1.7
510,363	+		MPMX19_04183	0.25	+1.0
510,363	+		MPMX19_04183	0.25	-1.3
510,363	+		MPMX19_04183	0.25	-3.2
510,363	+		MPMX19_04183	0.25	-1.0
510,363	+		MPMX19_04183	0.25	-0.7
510,363	+		MPMX19_04183	0.25	+0.2
510,363	+		MPMX19_04183	0.25	+0.1
510,363	+		MPMX19_04183	0.25	-0.1
510,363	+		MPMX19_04183	0.25	-0.8
510,363	+		MPMX19_04183	0.25	-1.0
510,363	+		MPMX19_04183	0.25	-0.3
510,363	+		MPMX19_04183	0.25	-1.0
510,363	+		MPMX19_04183	0.25	-1.0
510,363	+		MPMX19_04183	0.25	-1.0
510,363	+		MPMX19_04183	0.25	-0.8
510,363	+		MPMX19_04183	0.25	+0.1
510,363	+		MPMX19_04183	0.25	-0.2
510,363	+		MPMX19_04183	0.25	-0.7
510,363	+		MPMX19_04183	0.25	-0.1
510,363	+		MPMX19_04183	0.25	+1.4
510,363	+		MPMX19_04183	0.25	+0.3
510,363	+		MPMX19_04183	0.25	-0.7
510,363	+		MPMX19_04183	0.25	+0.9
510,364	-		MPMX19_04183	0.25	-1.0
510,364	-		MPMX19_04183	0.25	-0.5
510,364	-		MPMX19_04183	0.25	-0.3
510,364	-		MPMX19_04183	0.25	-0.9
510,364	-		MPMX19_04183	0.25	-0.5
510,364	-		MPMX19_04183	0.25	+0.4
510,364	-		MPMX19_04183	0.25	+0.1
510,364	-		MPMX19_04183	0.25	-0.0
510,364	-		MPMX19_04183	0.25	+0.2
510,364	-		MPMX19_04183	0.25	-0.7
510,364	-		MPMX19_04183	0.25	-1.7
510,364	-		MPMX19_04183	0.25	+1.0
510,364	-		MPMX19_04183	0.25	-0.4
510,364	-		MPMX19_04183	0.25	-0.1
510,364	-		MPMX19_04183	0.25	-0.0
510,364	-		MPMX19_04183	0.25	-0.9
510,364	-		MPMX19_04183	0.25	+1.3
510,364	-		MPMX19_04183	0.25	-1.1
510,364	-		MPMX19_04183	0.25	-0.9
510,609	+		MPMX19_04183	0.42	+1.4
510,609	+		MPMX19_04183	0.42	-1.8
510,610	-		MPMX19_04183	0.42	-0.1
510,610	-		MPMX19_04183	0.42	-0.7
510,610	-		MPMX19_04183	0.42	+0.1
510,610	-		MPMX19_04183	0.42	-1.1
510,666	+		MPMX19_04183	0.46	+0.3
510,666	+		MPMX19_04183	0.46	-0.9
510,666	+		MPMX19_04183	0.46	+0.3
510,666	+		MPMX19_04183	0.46	-0.1
510,666	+		MPMX19_04183	0.46	-1.6
510,666	+		MPMX19_04183	0.46	-1.3
510,666	+		MPMX19_04183	0.46	-0.5
510,666	+		MPMX19_04183	0.46	-0.5
510,666	+		MPMX19_04183	0.46	-0.8
510,666	+		MPMX19_04183	0.46	+0.2
510,667	-		MPMX19_04183	0.46	+0.9
510,667	-		MPMX19_04183	0.46	-1.1
510,667	-		MPMX19_04183	0.46	-0.2
510,667	-		MPMX19_04183	0.46	-0.9
510,667	-		MPMX19_04183	0.46	-1.1
510,667	-		MPMX19_04183	0.46	-1.3
510,667	-		MPMX19_04183	0.46	-0.5
510,667	-		MPMX19_04183	0.46	-0.8
510,667	-		MPMX19_04183	0.46	-0.1
510,667	-		MPMX19_04183	0.46	-0.2
510,711	+		MPMX19_04183	0.49	-0.5
510,711	+		MPMX19_04183	0.49	-1.8
510,711	+		MPMX19_04183	0.49	+0.1
510,711	+		MPMX19_04183	0.49	-1.0
510,711	+		MPMX19_04183	0.49	-1.5
510,712	-		MPMX19_04183	0.49	-1.9
510,712	-		MPMX19_04183	0.49	+0.4
510,712	-		MPMX19_04183	0.49	-1.9
510,712	-		MPMX19_04183	0.49	-0.9
510,712	-		MPMX19_04183	0.49	-1.3