Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04180 and MPMX19_04181 are separated by 23 nucleotides MPMX19_04181 and MPMX19_04182 are separated by 67 nucleotides
MPMX19_04180: MPMX19_04180 - D-inositol-3-phosphate glycosyltransferase, at 506,132 to 507,334
_04180
MPMX19_04181: MPMX19_04181 - hypothetical protein, at 507,358 to 508,341
_04181
MPMX19_04182: MPMX19_04182 - hypothetical protein, at 508,409 to 509,755
_04182
Position (kb) 507
508
509 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 506.735 kb on + strand, within MPMX19_04180 at 506.735 kb on + strand, within MPMX19_04180 at 506.767 kb on + strand, within MPMX19_04180 at 506.767 kb on + strand, within MPMX19_04180 at 506.768 kb on - strand, within MPMX19_04180 at 506.768 kb on - strand, within MPMX19_04180 at 506.802 kb on + strand, within MPMX19_04180 at 506.802 kb on + strand, within MPMX19_04180 at 506.802 kb on + strand, within MPMX19_04180 at 506.802 kb on + strand, within MPMX19_04180 at 506.802 kb on + strand, within MPMX19_04180 at 506.802 kb on + strand, within MPMX19_04180 at 506.802 kb on + strand, within MPMX19_04180 at 506.803 kb on - strand, within MPMX19_04180 at 506.803 kb on - strand, within MPMX19_04180 at 506.803 kb on - strand, within MPMX19_04180 at 506.803 kb on - strand, within MPMX19_04180 at 506.803 kb on - strand, within MPMX19_04180 at 506.803 kb on - strand, within MPMX19_04180 at 506.803 kb on - strand, within MPMX19_04180 at 506.803 kb on - strand, within MPMX19_04180 at 506.803 kb on - strand, within MPMX19_04180 at 506.803 kb on - strand, within MPMX19_04180 at 507.110 kb on + strand, within MPMX19_04180 at 507.111 kb on - strand, within MPMX19_04180 at 507.120 kb on + strand, within MPMX19_04180 at 507.120 kb on + strand, within MPMX19_04180 at 507.120 kb on + strand, within MPMX19_04180 at 507.120 kb on + strand, within MPMX19_04180 at 507.120 kb on + strand, within MPMX19_04180 at 507.120 kb on + strand, within MPMX19_04180 at 507.120 kb on + strand, within MPMX19_04180 at 507.120 kb on + strand, within MPMX19_04180 at 507.120 kb on + strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.121 kb on - strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.122 kb on + strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.123 kb on - strand, within MPMX19_04180 at 507.210 kb on + strand, within MPMX19_04180 at 507.210 kb on + strand, within MPMX19_04180 at 507.210 kb on + strand, within MPMX19_04180 at 507.210 kb on + strand, within MPMX19_04180 at 507.210 kb on + strand, within MPMX19_04180 at 507.210 kb on + strand, within MPMX19_04180 at 507.210 kb on + strand, within MPMX19_04180 at 507.210 kb on + strand, within MPMX19_04180 at 507.210 kb on + strand, within MPMX19_04180 at 507.210 kb on + strand, within MPMX19_04180 at 507.210 kb on + strand, within MPMX19_04180 at 507.211 kb on - strand, within MPMX19_04180 at 507.211 kb on - strand, within MPMX19_04180 at 507.211 kb on - strand, within MPMX19_04180 at 507.211 kb on - strand, within MPMX19_04180 at 507.211 kb on - strand, within MPMX19_04180 at 507.211 kb on - strand, within MPMX19_04180 at 507.211 kb on - strand, within MPMX19_04180 at 507.211 kb on - strand, within MPMX19_04180 at 507.211 kb on - strand, within MPMX19_04180 at 507.211 kb on - strand, within MPMX19_04180 at 507.334 kb on + strand at 507.334 kb on + strand at 507.334 kb on + strand at 507.334 kb on + strand at 507.334 kb on + strand at 507.335 kb on - strand at 507.560 kb on + strand, within MPMX19_04181 at 507.560 kb on + strand, within MPMX19_04181 at 507.560 kb on + strand, within MPMX19_04181 at 507.561 kb on - strand, within MPMX19_04181 at 507.561 kb on - strand, within MPMX19_04181 at 507.662 kb on + strand, within MPMX19_04181 at 507.662 kb on + strand, within MPMX19_04181 at 507.662 kb on + strand, within MPMX19_04181 at 507.662 kb on + strand, within MPMX19_04181 at 507.662 kb on + strand, within MPMX19_04181 at 507.662 kb on + strand, within MPMX19_04181 at 507.662 kb on + strand, within MPMX19_04181 at 507.663 kb on - strand, within MPMX19_04181 at 507.663 kb on - strand, within MPMX19_04181 at 507.663 kb on - strand, within MPMX19_04181 at 507.663 kb on - strand, within MPMX19_04181 at 507.663 kb on - strand, within MPMX19_04181 at 507.663 kb on - strand, within MPMX19_04181 at 507.663 kb on - strand, within MPMX19_04181 at 507.663 kb on - strand, within MPMX19_04181 at 507.663 kb on - strand, within MPMX19_04181 at 507.854 kb on + strand, within MPMX19_04181 at 507.854 kb on + strand, within MPMX19_04181 at 507.855 kb on - strand, within MPMX19_04181 at 507.855 kb on - strand, within MPMX19_04181 at 507.855 kb on - strand, within MPMX19_04181 at 507.855 kb on - strand, within MPMX19_04181 at 508.269 kb on + strand at 508.269 kb on + strand at 508.270 kb on - strand at 508.410 kb on + strand at 508.410 kb on + strand at 508.435 kb on - strand at 508.446 kb on + strand at 508.464 kb on + strand at 508.464 kb on + strand at 508.464 kb on + strand at 508.464 kb on + strand at 508.464 kb on + strand at 508.465 kb on - strand at 508.465 kb on - strand at 508.465 kb on - strand at 508.465 kb on - strand at 508.465 kb on - strand at 508.866 kb on + strand, within MPMX19_04182 at 508.866 kb on + strand, within MPMX19_04182 at 508.867 kb on - strand, within MPMX19_04182 at 508.867 kb on - strand, within MPMX19_04182 at 508.867 kb on - strand, within MPMX19_04182 at 508.881 kb on + strand, within MPMX19_04182 at 508.882 kb on - strand, within MPMX19_04182 at 508.882 kb on - strand, within MPMX19_04182 at 508.882 kb on - strand, within MPMX19_04182 at 508.882 kb on - strand, within MPMX19_04182 at 508.882 kb on - strand, within MPMX19_04182 at 508.882 kb on - strand, within MPMX19_04182 at 508.971 kb on + strand, within MPMX19_04182 at 508.971 kb on + strand, within MPMX19_04182 at 508.972 kb on - strand, within MPMX19_04182 at 508.972 kb on - strand, within MPMX19_04182 at 508.983 kb on + strand, within MPMX19_04182 at 508.983 kb on + strand, within MPMX19_04182 at 508.984 kb on - strand, within MPMX19_04182
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 506,735 + MPMX19_04180 0.50 -2.0 506,735 + MPMX19_04180 0.50 +1.5 506,767 + MPMX19_04180 0.53 +0.9 506,767 + MPMX19_04180 0.53 +0.7 506,768 - MPMX19_04180 0.53 -1.7 506,768 - MPMX19_04180 0.53 -1.1 506,802 + MPMX19_04180 0.56 -1.5 506,802 + MPMX19_04180 0.56 +1.3 506,802 + MPMX19_04180 0.56 +0.2 506,802 + MPMX19_04180 0.56 -0.1 506,802 + MPMX19_04180 0.56 +1.0 506,802 + MPMX19_04180 0.56 -0.1 506,802 + MPMX19_04180 0.56 -0.7 506,803 - MPMX19_04180 0.56 -2.1 506,803 - MPMX19_04180 0.56 -1.0 506,803 - MPMX19_04180 0.56 -2.1 506,803 - MPMX19_04180 0.56 +0.4 506,803 - MPMX19_04180 0.56 +0.5 506,803 - MPMX19_04180 0.56 -1.4 506,803 - MPMX19_04180 0.56 -0.1 506,803 - MPMX19_04180 0.56 +1.1 506,803 - MPMX19_04180 0.56 +0.2 506,803 - MPMX19_04180 0.56 -1.9 507,110 + MPMX19_04180 0.81 -1.3 507,111 - MPMX19_04180 0.81 +0.6 507,120 + MPMX19_04180 0.82 +0.7 507,120 + MPMX19_04180 0.82 +0.1 507,120 + MPMX19_04180 0.82 -1.0 507,120 + MPMX19_04180 0.82 +0.3 507,120 + MPMX19_04180 0.82 -1.8 507,120 + MPMX19_04180 0.82 -0.5 507,120 + MPMX19_04180 0.82 -0.3 507,120 + MPMX19_04180 0.82 -0.2 507,120 + MPMX19_04180 0.82 +0.8 507,121 - MPMX19_04180 0.82 -2.2 507,121 - MPMX19_04180 0.82 -1.0 507,121 - MPMX19_04180 0.82 +0.1 507,121 - MPMX19_04180 0.82 -0.0 507,121 - MPMX19_04180 0.82 +0.1 507,121 - MPMX19_04180 0.82 -1.6 507,121 - MPMX19_04180 0.82 +0.5 507,121 - MPMX19_04180 0.82 -1.3 507,121 - MPMX19_04180 0.82 +0.1 507,121 - MPMX19_04180 0.82 -1.1 507,121 - MPMX19_04180 0.82 -0.1 507,121 - MPMX19_04180 0.82 -0.5 507,121 - MPMX19_04180 0.82 -1.6 507,122 + MPMX19_04180 0.82 +0.7 507,122 + MPMX19_04180 0.82 -1.3 507,122 + MPMX19_04180 0.82 -0.2 507,122 + MPMX19_04180 0.82 -0.5 507,122 + MPMX19_04180 0.82 -2.3 507,122 + MPMX19_04180 0.82 -0.3 507,122 + MPMX19_04180 0.82 -0.9 507,122 + MPMX19_04180 0.82 +1.3 507,122 + MPMX19_04180 0.82 -1.0 507,122 + MPMX19_04180 0.82 +1.2 507,122 + MPMX19_04180 0.82 +0.1 507,122 + MPMX19_04180 0.82 -0.1 507,122 + MPMX19_04180 0.82 -0.3 507,122 + MPMX19_04180 0.82 +0.4 507,122 + MPMX19_04180 0.82 +0.3 507,122 + MPMX19_04180 0.82 +0.7 507,122 + MPMX19_04180 0.82 -0.8 507,122 + MPMX19_04180 0.82 -0.5 507,122 + MPMX19_04180 0.82 -0.7 507,122 + MPMX19_04180 0.82 -0.6 507,122 + MPMX19_04180 0.82 +0.1 507,122 + MPMX19_04180 0.82 +0.6 507,122 + MPMX19_04180 0.82 -0.8 507,122 + MPMX19_04180 0.82 -2.9 507,122 + MPMX19_04180 0.82 -0.2 507,122 + MPMX19_04180 0.82 -0.6 507,122 + MPMX19_04180 0.82 +0.1 507,122 + MPMX19_04180 0.82 +0.9 507,122 + MPMX19_04180 0.82 -0.7 507,122 + MPMX19_04180 0.82 +0.1 507,122 + MPMX19_04180 0.82 -1.7 507,122 + MPMX19_04180 0.82 +0.7 507,122 + MPMX19_04180 0.82 -0.7 507,122 + MPMX19_04180 0.82 +0.4 507,122 + MPMX19_04180 0.82 -1.0 507,122 + MPMX19_04180 0.82 -1.1 507,123 - MPMX19_04180 0.82 -1.0 507,123 - MPMX19_04180 0.82 -1.4 507,123 - MPMX19_04180 0.82 -1.9 507,123 - MPMX19_04180 0.82 +1.2 507,123 - MPMX19_04180 0.82 -0.6 507,123 - MPMX19_04180 0.82 -0.1 507,123 - MPMX19_04180 0.82 -0.1 507,123 - MPMX19_04180 0.82 -1.7 507,123 - MPMX19_04180 0.82 -1.0 507,123 - MPMX19_04180 0.82 +0.4 507,123 - MPMX19_04180 0.82 -2.6 507,123 - MPMX19_04180 0.82 +0.5 507,123 - MPMX19_04180 0.82 -0.5 507,123 - MPMX19_04180 0.82 -0.5 507,123 - MPMX19_04180 0.82 +0.4 507,123 - MPMX19_04180 0.82 -1.1 507,123 - MPMX19_04180 0.82 -0.7 507,123 - MPMX19_04180 0.82 -0.2 507,123 - MPMX19_04180 0.82 -0.8 507,123 - MPMX19_04180 0.82 -1.5 507,123 - MPMX19_04180 0.82 -0.3 507,123 - MPMX19_04180 0.82 -1.7 507,123 - MPMX19_04180 0.82 +0.3 507,123 - MPMX19_04180 0.82 +0.9 507,123 - MPMX19_04180 0.82 -0.3 507,123 - MPMX19_04180 0.82 -1.1 507,123 - MPMX19_04180 0.82 -3.5 507,123 - MPMX19_04180 0.82 -0.5 507,123 - MPMX19_04180 0.82 -0.3 507,123 - MPMX19_04180 0.82 -0.3 507,123 - MPMX19_04180 0.82 +0.1 507,123 - MPMX19_04180 0.82 -0.7 507,123 - MPMX19_04180 0.82 -0.1 507,123 - MPMX19_04180 0.82 -0.1 507,123 - MPMX19_04180 0.82 -0.7 507,123 - MPMX19_04180 0.82 -0.4 507,123 - MPMX19_04180 0.82 -0.5 507,123 - MPMX19_04180 0.82 +0.3 507,123 - MPMX19_04180 0.82 -1.7 507,123 - MPMX19_04180 0.82 -0.3 507,123 - MPMX19_04180 0.82 +0.1 507,123 - MPMX19_04180 0.82 -0.1 507,210 + MPMX19_04180 0.90 -1.1 507,210 + MPMX19_04180 0.90 +0.7 507,210 + MPMX19_04180 0.90 +1.2 507,210 + MPMX19_04180 0.90 +1.1 507,210 + MPMX19_04180 0.90 -2.4 507,210 + MPMX19_04180 0.90 +0.8 507,210 + MPMX19_04180 0.90 -0.7 507,210 + MPMX19_04180 0.90 +0.7 507,210 + MPMX19_04180 0.90 -1.6 507,210 + MPMX19_04180 0.90 +0.4 507,210 + MPMX19_04180 0.90 -1.1 507,211 - MPMX19_04180 0.90 -0.3 507,211 - MPMX19_04180 0.90 -0.1 507,211 - MPMX19_04180 0.90 -1.2 507,211 - MPMX19_04180 0.90 +1.3 507,211 - MPMX19_04180 0.90 -0.2 507,211 - MPMX19_04180 0.90 +0.7 507,211 - MPMX19_04180 0.90 -2.0 507,211 - MPMX19_04180 0.90 -1.8 507,211 - MPMX19_04180 0.90 -0.8 507,211 - MPMX19_04180 0.90 -0.0 507,334 + -0.1 507,334 + -0.1 507,334 + -0.1 507,334 + -0.7 507,334 + -0.7 507,335 - -0.7 507,560 + MPMX19_04181 0.21 -0.6 507,560 + MPMX19_04181 0.21 -0.3 507,560 + MPMX19_04181 0.21 -0.9 507,561 - MPMX19_04181 0.21 +0.2 507,561 - MPMX19_04181 0.21 -1.0 507,662 + MPMX19_04181 0.31 -2.3 507,662 + MPMX19_04181 0.31 -0.3 507,662 + MPMX19_04181 0.31 -1.0 507,662 + MPMX19_04181 0.31 -0.3 507,662 + MPMX19_04181 0.31 -0.5 507,662 + MPMX19_04181 0.31 -0.3 507,662 + MPMX19_04181 0.31 -1.2 507,663 - MPMX19_04181 0.31 -0.1 507,663 - MPMX19_04181 0.31 +0.3 507,663 - MPMX19_04181 0.31 -0.1 507,663 - MPMX19_04181 0.31 -0.1 507,663 - MPMX19_04181 0.31 -1.9 507,663 - MPMX19_04181 0.31 -0.7 507,663 - MPMX19_04181 0.31 -1.0 507,663 - MPMX19_04181 0.31 -0.1 507,663 - MPMX19_04181 0.31 -0.5 507,854 + MPMX19_04181 0.50 -0.1 507,854 + MPMX19_04181 0.50 +0.5 507,855 - MPMX19_04181 0.51 +1.7 507,855 - MPMX19_04181 0.51 -0.8 507,855 - MPMX19_04181 0.51 -0.2 507,855 - MPMX19_04181 0.51 -1.1 508,269 + -0.7 508,269 + -0.0 508,270 - +0.4 508,410 + -0.7 508,410 + -0.5 508,435 - +1.7 508,446 + +0.9 508,464 + -1.7 508,464 + -0.7 508,464 + +0.7 508,464 + -1.7 508,464 + -1.4 508,465 - -0.3 508,465 - -0.2 508,465 - -0.3 508,465 - +0.1 508,465 - -1.2 508,866 + MPMX19_04182 0.34 -0.4 508,866 + MPMX19_04182 0.34 -0.1 508,867 - MPMX19_04182 0.34 +0.1 508,867 - MPMX19_04182 0.34 +0.1 508,867 - MPMX19_04182 0.34 -0.7 508,881 + MPMX19_04182 0.35 -0.8 508,882 - MPMX19_04182 0.35 +0.3 508,882 - MPMX19_04182 0.35 +0.2 508,882 - MPMX19_04182 0.35 +0.4 508,882 - MPMX19_04182 0.35 -1.8 508,882 - MPMX19_04182 0.35 -0.9 508,882 - MPMX19_04182 0.35 +0.8 508,971 + MPMX19_04182 0.42 +0.1 508,971 + MPMX19_04182 0.42 -1.8 508,972 - MPMX19_04182 0.42 -1.0 508,972 - MPMX19_04182 0.42 -1.1 508,983 + MPMX19_04182 0.43 +0.7 508,983 + MPMX19_04182 0.43 -0.5 508,984 - MPMX19_04182 0.43 +1.0
Or see this region's nucleotide sequence