Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03861

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
106,670	+		MPMX19_03860	0.11	-0.4
106,670	+		MPMX19_03860	0.11	-2.2
106,671	-		MPMX19_03860	0.12	+0.9
106,671	-		MPMX19_03860	0.12	-0.3
106,671	-		MPMX19_03860	0.12	-0.7
106,671	-		MPMX19_03860	0.12	-1.4
106,693	+		MPMX19_03860	0.15	-1.5
106,693	+		MPMX19_03860	0.15	-0.8
106,693	+		MPMX19_03860	0.15	-0.3
106,693	+		MPMX19_03860	0.15	-0.1
106,730	+		MPMX19_03860	0.21	-1.1
106,736	+		MPMX19_03860	0.22	-0.8
106,736	+		MPMX19_03860	0.22	-0.1
106,736	+		MPMX19_03860	0.22	-0.8
106,737	-		MPMX19_03860	0.22	-2.1
106,737	-		MPMX19_03860	0.22	-0.3
106,737	-		MPMX19_03860	0.22	+1.2
106,769	+		MPMX19_03860	0.27	+0.4
106,769	+		MPMX19_03860	0.27	+0.3
106,769	+		MPMX19_03860	0.27	+0.2
106,769	+		MPMX19_03860	0.27	+0.6
106,769	+		MPMX19_03860	0.27	-0.3
106,769	+		MPMX19_03860	0.27	-0.6
106,769	+		MPMX19_03860	0.27	-0.4
106,769	+		MPMX19_03860	0.27	-0.1
106,769	+		MPMX19_03860	0.27	-1.8
106,769	+		MPMX19_03860	0.27	+0.5
106,769	+		MPMX19_03860	0.27	-0.4
106,770	-		MPMX19_03860	0.27	+0.7
106,770	-		MPMX19_03860	0.27	+0.9
106,770	-		MPMX19_03860	0.27	-0.5
106,770	-		MPMX19_03860	0.27	-0.8
106,770	-		MPMX19_03860	0.27	-1.5
106,770	-		MPMX19_03860	0.27	+1.5
106,770	-		MPMX19_03860	0.27	+0.4
106,770	-		MPMX19_03860	0.27	+0.3
106,770	-		MPMX19_03860	0.27	-0.7
106,770	-		MPMX19_03860	0.27	+0.6
106,770	-		MPMX19_03860	0.27	-0.8
106,770	-		MPMX19_03860	0.27	+1.3
106,770	-		MPMX19_03860	0.27	-1.1
106,770	-		MPMX19_03860	0.27	-0.3
106,770	-		MPMX19_03860	0.27	+0.1
106,770	-		MPMX19_03860	0.27	-0.6
106,770	-		MPMX19_03860	0.27	-0.3
106,770	-		MPMX19_03860	0.27	-0.3
106,770	-		MPMX19_03860	0.27	+0.3
106,770	-		MPMX19_03860	0.27	-0.8
106,770	-		MPMX19_03860	0.27	-0.4
106,770	-		MPMX19_03860	0.27	+0.4
106,845	+		MPMX19_03860	0.39	-1.5
106,845	+		MPMX19_03860	0.39	+0.0
106,845	+		MPMX19_03860	0.39	+1.0
106,845	+		MPMX19_03860	0.39	-0.6
106,868	+		MPMX19_03860	0.43	-2.8
106,869	-		MPMX19_03860	0.43	-1.0
106,881	+		MPMX19_03860	0.45	-2.1
106,881	+		MPMX19_03860	0.45	+0.2
106,881	+		MPMX19_03860	0.45	-0.5
106,881	+		MPMX19_03860	0.45	+2.1
106,881	+		MPMX19_03860	0.45	-1.3
106,881	+		MPMX19_03860	0.45	-0.6
106,881	+		MPMX19_03860	0.45	+0.2
106,882	-		MPMX19_03860	0.45	-1.3
106,882	-		MPMX19_03860	0.45	+0.7
106,882	-		MPMX19_03860	0.45	+0.4
106,882	-		MPMX19_03860	0.45	-0.7
106,882	-		MPMX19_03860	0.45	+0.5
106,882	-		MPMX19_03860	0.45	-0.6
106,882	-		MPMX19_03860	0.45	-1.1
106,882	-		MPMX19_03860	0.45	-0.7
106,883	-		MPMX19_03860	0.45	-1.4
106,962	-		MPMX19_03860	0.58	-1.6
107,004	+		MPMX19_03860	0.64	-0.3
107,004	+		MPMX19_03860	0.64	+0.5
107,004	+		MPMX19_03860	0.64	+0.2
107,004	+		MPMX19_03860	0.64	+1.0
107,004	+		MPMX19_03860	0.64	+0.8
107,005	-		MPMX19_03860	0.64	-0.1
107,034	+		MPMX19_03860	0.69	-0.2
107,034	+		MPMX19_03860	0.69	-0.1
107,035	-		MPMX19_03860	0.69	-0.2
107,127	+		MPMX19_03860	0.84	-1.3
107,127	+		MPMX19_03860	0.84	-0.7
107,127	+		MPMX19_03860	0.84	+0.7
107,127	+		MPMX19_03860	0.84	+0.7
107,127	+		MPMX19_03860	0.84	+0.7
107,127	+		MPMX19_03860	0.84	-1.2
107,127	+		MPMX19_03860	0.84	-1.1
107,127	+		MPMX19_03860	0.84	-0.7
107,127	+		MPMX19_03860	0.84	+0.2
107,127	+		MPMX19_03860	0.84	-0.3
107,128	-		MPMX19_03860	0.84	-0.5
107,128	-		MPMX19_03860	0.84	-1.7
107,128	-		MPMX19_03860	0.84	-1.5
107,128	-		MPMX19_03860	0.84	+1.7
107,128	-		MPMX19_03860	0.84	+0.1
107,128	-		MPMX19_03860	0.84	-0.5
107,128	-		MPMX19_03860	0.84	-0.6
107,128	-		MPMX19_03860	0.84	+0.7
107,128	-		MPMX19_03860	0.84	-1.6
107,129	+		MPMX19_03860	0.84	+0.7
107,129	+		MPMX19_03860	0.84	+1.1
107,129	+		MPMX19_03860	0.84	-0.9
107,129	+		MPMX19_03860	0.84	-1.6
107,130	-		MPMX19_03860	0.84	-1.2
107,130	-		MPMX19_03860	0.84	-0.3
107,130	-		MPMX19_03860	0.84	-1.3
107,207	+				-1.8
107,208	-				+0.5
107,326	+				-2.2
107,327	-				-1.1
107,327	-				+0.0
107,327	-				+1.1
107,327	-				+0.0
107,327	-				-1.7
107,561	+				+0.5
107,562	-				-1.4
107,562	-				-0.8
107,562	-				-0.1
107,562	-				-1.6
107,562	-				-2.4
107,574	+				-0.8
107,574	+				+0.9
107,574	+				+2.1
107,574	+				-0.1
107,575	-				-0.3
107,575	-				+0.7
107,575	-				+0.0
107,575	-				+1.2
107,700	+				+0.7
107,700	+				-0.7
107,700	+				+1.7
107,700	+				+0.4
107,700	+				+1.7
107,701	-				-0.3
107,701	-				+0.5
107,701	-				+0.7
107,701	-				+0.7
107,703	+				-2.0
107,703	+				+0.3
107,703	+				-2.0
107,703	+				-1.1
107,703	+				-0.3
107,703	+				+2.3
107,703	+				-1.3
107,703	+				-0.8
107,703	+				-0.1
107,704	-				-0.3
107,704	-				-1.1
107,704	-				+0.5
107,704	-				+0.4
107,704	-				+0.2
107,704	-				+0.5
107,704	-				+0.0
107,704	-				+0.1
107,704	-				-0.1
107,704	-				+1.3
107,704	-				-0.6
107,704	-				-2.1
107,704	-				-0.6
107,705	-				-0.8
107,712	+				-1.0
107,772	+		MPMX19_03861	0.16	+0.4
107,772	+		MPMX19_03861	0.16	-2.0
107,772	+		MPMX19_03861	0.16	-0.7
107,772	+		MPMX19_03861	0.16	-0.1
107,772	+		MPMX19_03861	0.16	-0.3
107,772	+		MPMX19_03861	0.16	-0.8
107,772	+		MPMX19_03861	0.16	+1.0
107,772	+		MPMX19_03861	0.16	+0.2
107,772	+		MPMX19_03861	0.16	+0.9
107,772	+		MPMX19_03861	0.16	-0.5
107,772	+		MPMX19_03861	0.16	-0.5
107,772	+		MPMX19_03861	0.16	-0.5
107,773	-		MPMX19_03861	0.16	+0.5
107,773	-		MPMX19_03861	0.16	-1.1
107,773	-		MPMX19_03861	0.16	+0.4
107,773	-		MPMX19_03861	0.16	-2.0
107,773	-		MPMX19_03861	0.16	-0.6
107,773	-		MPMX19_03861	0.16	-0.4
107,773	-		MPMX19_03861	0.16	+0.2
107,773	-		MPMX19_03861	0.16	-1.2
107,773	-		MPMX19_03861	0.16	-0.3
107,773	-		MPMX19_03861	0.16	-1.1
107,773	-		MPMX19_03861	0.16	+1.3
107,799	+		MPMX19_03861	0.19	+0.7
107,799	+		MPMX19_03861	0.19	+1.0
107,799	+		MPMX19_03861	0.19	-1.3
107,799	+		MPMX19_03861	0.19	-0.8
107,799	+		MPMX19_03861	0.19	-0.4
107,799	+		MPMX19_03861	0.19	-1.4
107,799	+		MPMX19_03861	0.19	-0.6
107,799	+		MPMX19_03861	0.19	+0.6
107,799	+		MPMX19_03861	0.19	-2.6
107,800	-		MPMX19_03861	0.19	+1.3
107,800	-		MPMX19_03861	0.19	-1.4
107,800	-		MPMX19_03861	0.19	+0.9
107,800	-		MPMX19_03861	0.19	-0.2
107,800	-		MPMX19_03861	0.19	+2.1
107,800	-		MPMX19_03861	0.19	-1.7
107,800	-		MPMX19_03861	0.19	+1.2
107,800	-		MPMX19_03861	0.19	-0.8
107,800	-		MPMX19_03861	0.19	-1.4
107,800	-		MPMX19_03861	0.19	-0.6
107,800	-		MPMX19_03861	0.19	-1.6
107,800	-		MPMX19_03861	0.19	+0.5
107,916	+		MPMX19_03861	0.32	-1.3
107,916	+		MPMX19_03861	0.32	-1.3
107,916	+		MPMX19_03861	0.32	-1.1
107,917	-		MPMX19_03861	0.32	+1.2
108,006	+		MPMX19_03861	0.42	+0.7
108,006	+		MPMX19_03861	0.42	-1.1
108,006	+		MPMX19_03861	0.42	+0.5
108,006	+		MPMX19_03861	0.42	+0.0
108,007	-		MPMX19_03861	0.42	+1.2
108,052	+		MPMX19_03861	0.47	+0.6
108,052	+		MPMX19_03861	0.47	-0.4
108,136	-		MPMX19_03861	0.56	-0.4
108,136	-		MPMX19_03861	0.56	-0.6
108,168	+		MPMX19_03861	0.60	-1.5
108,169	-		MPMX19_03861	0.60	-0.8
108,219	+		MPMX19_03861	0.66	-0.6
108,219	+		MPMX19_03861	0.66	+0.9
108,219	+		MPMX19_03861	0.66	+0.6
108,219	+		MPMX19_03861	0.66	+0.5
108,219	+		MPMX19_03861	0.66	-0.1
108,219	+		MPMX19_03861	0.66	+0.4
108,219	+		MPMX19_03861	0.66	+0.3
108,219	+		MPMX19_03861	0.66	-0.2
108,220	-		MPMX19_03861	0.66	+0.2
108,220	-		MPMX19_03861	0.66	-0.8
108,220	-		MPMX19_03861	0.66	+0.7
108,220	-		MPMX19_03861	0.66	-0.5
108,220	-		MPMX19_03861	0.66	-2.5
108,292	+		MPMX19_03861	0.74	-0.3
108,293	+		MPMX19_03861	0.74	-0.4
108,293	+		MPMX19_03861	0.74	-0.7
108,293	+		MPMX19_03861	0.74	-0.6
108,293	+		MPMX19_03861	0.74	-0.1
108,293	+		MPMX19_03861	0.74	-1.1
108,293	+		MPMX19_03861	0.74	-0.7
108,294	-		MPMX19_03861	0.74	+0.2
108,294	-		MPMX19_03861	0.74	-0.1
108,294	-		MPMX19_03861	0.74	-3.2
108,294	-		MPMX19_03861	0.74	-1.3
108,294	-		MPMX19_03861	0.74	-0.3
108,294	-		MPMX19_03861	0.74	-1.1
108,545	-				+0.7
108,567	+				-0.7
108,567	+				-0.8
108,590	+				+0.7
108,590	+				+0.1
108,590	+				-0.3
108,590	+				+0.2
108,590	+				-1.0
108,590	+				+0.3
108,590	+				+0.2
108,590	+				-0.8
108,590	+				-1.1
108,590	+				-0.6
108,591	-				+0.4
108,591	-				-1.0
108,591	-				-0.6
108,591	-				-0.8
108,591	-				+0.4
108,591	-				-0.3
108,591	-				-0.8
108,591	-				+0.4
108,591	-				+0.2
108,592	+				-0.3
108,592	+				-0.3
108,593	-				-0.5
108,638	-				-2.3
108,790	+				+0.4
108,790	+				+0.5
108,790	+				+0.2
108,790	+				+0.9
108,790	+				-1.1
108,790	+				-0.6
108,790	+				-0.9
108,790	+				-0.4
108,791	-				-0.3
108,791	-				-1.7
108,791	-				-1.0
108,791	-				-0.6
108,791	-				+0.4
108,791	-				+0.7
108,791	-				-0.8
108,791	-				-0.6
108,791	-				-0.5
108,791	-				+0.7
108,791	-				-0.1
108,791	-				-2.3
108,791	-				+2.0
108,995	+				+1.7
108,995	+				+1.0
108,995	+				-1.0
108,996	-				-2.3
109,008	-				+0.9
109,124	+		MPMX19_03862	0.35	+0.9
109,125	-		MPMX19_03862	0.36	-1.4
109,142	+		MPMX19_03862	0.41	-0.5
109,142	+		MPMX19_03862	0.41	-0.3
109,142	+		MPMX19_03862	0.41	-1.1
109,143	-		MPMX19_03862	0.41	+0.7
109,143	-		MPMX19_03862	0.41	+1.2
109,148	+		MPMX19_03862	0.42	-0.3
109,148	+		MPMX19_03862	0.42	+0.7
109,148	+		MPMX19_03862	0.42	-1.2
109,149	-		MPMX19_03862	0.43	-0.7
109,149	-		MPMX19_03862	0.43	-0.1
109,149	-		MPMX19_03862	0.43	+0.2
109,149	-		MPMX19_03862	0.43	+1.7
109,149	-		MPMX19_03862	0.43	+1.0
109,149	-		MPMX19_03862	0.43	-1.4
109,149	-		MPMX19_03862	0.43	-1.1
109,149	-		MPMX19_03862	0.43	-0.8
109,149	-		MPMX19_03862	0.43	-1.4
109,346	+				-0.2
109,346	+				-0.1
109,346	+				+0.2
109,346	+				-0.3
109,346	+				-0.4
109,346	+				-2.2
109,346	+				+0.4
109,346	+				-0.3
109,346	+				-1.7
109,347	-				+0.0
109,347	-				-0.7
109,347	-				-0.3
109,465	+				+0.7
109,465	+				-0.4
109,465	+				+0.6
109,465	+				-0.8
109,465	+				-1.5
109,466	-				+1.2
109,466	-				+0.3
109,466	-				-0.3
109,466	-				-0.3