Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03797

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
31,217	+				-2.3
31,217	+				+1.1
31,218	-				+0.7
31,218	-				+0.0
31,218	-				-0.7
31,224	+				-2.1
31,224	+				-1.3
31,446	+				-2.5
31,446	+				-1.6
31,447	-				-1.6
31,447	-				+0.2
31,452	+				-1.4
31,452	+				+1.4
31,453	-				-0.3
31,453	-				-0.5
31,557	+		MPMX19_03796	0.22	+0.9
31,557	+		MPMX19_03796	0.22	+0.2
31,558	-		MPMX19_03796	0.22	-0.5
31,558	-		MPMX19_03796	0.22	+2.3
31,558	-		MPMX19_03796	0.22	-1.1
31,558	-		MPMX19_03796	0.22	-1.8
31,558	-		MPMX19_03796	0.22	-1.8
31,558	-		MPMX19_03796	0.22	-0.7
31,558	-		MPMX19_03796	0.22	-1.4
31,558	-		MPMX19_03796	0.22	+0.4
31,584	+		MPMX19_03796	0.26	-0.2
31,584	+		MPMX19_03796	0.26	-0.1
31,584	+		MPMX19_03796	0.26	+0.4
31,584	+		MPMX19_03796	0.26	+0.9
31,584	+		MPMX19_03796	0.26	+0.5
31,584	+		MPMX19_03796	0.26	-1.3
31,584	+		MPMX19_03796	0.26	-1.0
31,584	+		MPMX19_03796	0.26	+0.7
31,585	-		MPMX19_03796	0.26	-1.3
31,585	-		MPMX19_03796	0.26	-0.4
31,585	-		MPMX19_03796	0.26	+0.2
31,585	-		MPMX19_03796	0.26	-0.9
31,585	-		MPMX19_03796	0.26	-0.2
31,585	-		MPMX19_03796	0.26	-0.3
31,602	+		MPMX19_03796	0.28	-0.3
31,602	+		MPMX19_03796	0.28	-0.4
31,602	+		MPMX19_03796	0.28	-0.7
31,603	-		MPMX19_03796	0.28	-0.1
31,603	-		MPMX19_03796	0.28	-1.4
31,603	-		MPMX19_03796	0.28	-2.3
31,603	-		MPMX19_03796	0.28	+0.3
31,603	-		MPMX19_03796	0.28	-1.3
31,603	-		MPMX19_03796	0.28	-1.6
31,767	+		MPMX19_03796	0.50	-0.5
31,767	+		MPMX19_03796	0.50	-0.3
31,767	+		MPMX19_03796	0.50	-1.5
31,767	+		MPMX19_03796	0.50	-1.4
31,767	+		MPMX19_03796	0.50	-0.6
31,767	+		MPMX19_03796	0.50	-0.2
31,767	+		MPMX19_03796	0.50	-0.3
31,767	+		MPMX19_03796	0.50	+0.6
31,767	+		MPMX19_03796	0.50	-1.2
31,767	+		MPMX19_03796	0.50	-1.2
31,767	+		MPMX19_03796	0.50	-2.3
31,767	+		MPMX19_03796	0.50	+1.1
31,767	+		MPMX19_03796	0.50	-1.3
31,767	+		MPMX19_03796	0.50	-0.3
31,768	-		MPMX19_03796	0.50	+0.5
31,768	-		MPMX19_03796	0.50	-0.6
31,768	-		MPMX19_03796	0.50	+1.1
31,768	-		MPMX19_03796	0.50	+0.3
31,768	-		MPMX19_03796	0.50	-0.4
31,768	-		MPMX19_03796	0.50	+0.6
31,768	-		MPMX19_03796	0.50	-1.4
31,768	-		MPMX19_03796	0.50	-0.8
31,768	-		MPMX19_03796	0.50	+0.3
31,768	-		MPMX19_03796	0.50	-0.5
31,779	+		MPMX19_03796	0.52	+0.2
31,779	+		MPMX19_03796	0.52	+0.5
31,779	+		MPMX19_03796	0.52	-2.7
31,779	+		MPMX19_03796	0.52	-0.2
31,779	+		MPMX19_03796	0.52	-0.4
31,779	+		MPMX19_03796	0.52	-1.3
31,779	+		MPMX19_03796	0.52	-0.4
31,779	+		MPMX19_03796	0.52	-0.3
31,779	+		MPMX19_03796	0.52	+1.2
31,780	-		MPMX19_03796	0.52	-2.1
31,780	-		MPMX19_03796	0.52	+0.0
31,780	-		MPMX19_03796	0.52	+0.4
31,780	-		MPMX19_03796	0.52	-1.7
31,780	-		MPMX19_03796	0.52	-0.8
31,857	+		MPMX19_03796	0.62	-0.3
31,857	+		MPMX19_03796	0.62	-0.4
31,858	-		MPMX19_03796	0.62	-0.8
31,858	-		MPMX19_03796	0.62	-0.6
31,858	-		MPMX19_03796	0.62	-1.8
31,878	+		MPMX19_03796	0.65	+0.3
31,905	+		MPMX19_03796	0.69	-0.5
31,905	+		MPMX19_03796	0.69	-0.8
31,905	+		MPMX19_03796	0.69	+0.7
31,905	+		MPMX19_03796	0.69	-1.0
31,905	+		MPMX19_03796	0.69	-0.2
31,905	+		MPMX19_03796	0.69	+0.9
31,905	+		MPMX19_03796	0.69	-0.3
31,906	-		MPMX19_03796	0.69	-0.9
31,906	-		MPMX19_03796	0.69	-0.8
31,906	-		MPMX19_03796	0.69	+0.6
31,906	-		MPMX19_03796	0.69	+0.4
31,906	-		MPMX19_03796	0.69	-0.9
31,906	-		MPMX19_03796	0.69	+0.1
31,906	-		MPMX19_03796	0.69	-1.1
31,926	+		MPMX19_03796	0.71	+0.3
31,926	+		MPMX19_03796	0.71	-0.5
31,926	+		MPMX19_03796	0.71	-0.3
31,927	-		MPMX19_03796	0.72	+1.0
31,927	-		MPMX19_03796	0.72	-0.4
31,927	-		MPMX19_03796	0.72	+0.7
31,927	-		MPMX19_03796	0.72	+0.2
32,031	+		MPMX19_03796	0.86	-1.8
32,031	+		MPMX19_03796	0.86	-0.1
32,032	-		MPMX19_03796	0.86	-0.6
32,088	+				-2.2
32,362	+		MPMX19_03797	0.21	-0.7
32,362	+		MPMX19_03797	0.21	-1.0
32,362	+		MPMX19_03797	0.21	-1.3
32,362	+		MPMX19_03797	0.21	+1.7
32,362	+		MPMX19_03797	0.21	-0.3
32,362	+		MPMX19_03797	0.21	+1.2
32,362	+		MPMX19_03797	0.21	-0.6
32,362	+		MPMX19_03797	0.21	-0.5
32,362	+		MPMX19_03797	0.21	-1.4
32,363	-		MPMX19_03797	0.21	-0.2
32,363	-		MPMX19_03797	0.21	-0.3
32,363	-		MPMX19_03797	0.21	+0.0
32,363	-		MPMX19_03797	0.21	-1.3
32,363	-		MPMX19_03797	0.21	+1.0
32,363	-		MPMX19_03797	0.21	-0.2
32,398	+		MPMX19_03797	0.23	-1.3
32,398	+		MPMX19_03797	0.23	+0.0
32,398	+		MPMX19_03797	0.23	-1.3
32,398	+		MPMX19_03797	0.23	+0.2
32,398	+		MPMX19_03797	0.23	-0.9
32,398	+		MPMX19_03797	0.23	-1.1
32,398	+		MPMX19_03797	0.23	-1.6
32,398	+		MPMX19_03797	0.23	+0.0
32,399	-		MPMX19_03797	0.24	-0.4
32,399	-		MPMX19_03797	0.24	+0.2
32,399	-		MPMX19_03797	0.24	+1.0
32,399	-		MPMX19_03797	0.24	-0.8
32,399	-		MPMX19_03797	0.24	-0.3
32,399	-		MPMX19_03797	0.24	-0.8
32,399	-		MPMX19_03797	0.24	-0.8
32,399	-		MPMX19_03797	0.24	-1.3
32,473	+		MPMX19_03797	0.30	+0.7
32,473	+		MPMX19_03797	0.30	-0.3
32,473	+		MPMX19_03797	0.30	-0.0
32,473	+		MPMX19_03797	0.30	+0.4
32,473	+		MPMX19_03797	0.30	-0.7
32,473	+		MPMX19_03797	0.30	+1.3
32,473	+		MPMX19_03797	0.30	-0.1
32,474	-		MPMX19_03797	0.30	+0.2
32,474	-		MPMX19_03797	0.30	+0.0
32,474	-		MPMX19_03797	0.30	-2.7
32,474	-		MPMX19_03797	0.30	+0.2
32,474	-		MPMX19_03797	0.30	-1.5
32,761	+		MPMX19_03797	0.53	-0.2
32,761	+		MPMX19_03797	0.53	-0.6
32,761	+		MPMX19_03797	0.53	+1.2
32,761	+		MPMX19_03797	0.53	-0.0
32,762	-		MPMX19_03797	0.53	-2.2
32,762	-		MPMX19_03797	0.53	+0.3
32,762	-		MPMX19_03797	0.53	-2.2
32,762	-		MPMX19_03797	0.53	+1.3
32,783	+		MPMX19_03797	0.55	-1.0
32,827	+		MPMX19_03797	0.58	-0.1
32,827	+		MPMX19_03797	0.58	-0.5
32,827	+		MPMX19_03797	0.58	-0.1
32,827	+		MPMX19_03797	0.58	+0.0
32,827	+		MPMX19_03797	0.58	-0.8
32,827	+		MPMX19_03797	0.58	+1.9
32,827	+		MPMX19_03797	0.58	+0.0
32,828	-		MPMX19_03797	0.59	+0.0
32,828	-		MPMX19_03797	0.59	-1.2
32,828	-		MPMX19_03797	0.59	-0.6
32,828	-		MPMX19_03797	0.59	+1.2
32,828	-		MPMX19_03797	0.59	-0.3
32,828	-		MPMX19_03797	0.59	-0.0
32,828	-		MPMX19_03797	0.59	+0.9
32,828	-		MPMX19_03797	0.59	+0.3
32,864	+		MPMX19_03797	0.61	-0.8
32,864	+		MPMX19_03797	0.61	+0.4
32,864	+		MPMX19_03797	0.61	+0.2
32,865	-		MPMX19_03797	0.62	-0.6
32,932	+		MPMX19_03797	0.67	+0.6
32,932	+		MPMX19_03797	0.67	-0.4
32,932	+		MPMX19_03797	0.67	-1.6
32,932	+		MPMX19_03797	0.67	+0.2
32,932	+		MPMX19_03797	0.67	-0.5
32,932	+		MPMX19_03797	0.67	-1.5
32,932	+		MPMX19_03797	0.67	+1.5
32,932	+		MPMX19_03797	0.67	-0.6
32,933	-		MPMX19_03797	0.67	-0.8
32,933	-		MPMX19_03797	0.67	+1.1
32,933	-		MPMX19_03797	0.67	-1.6
32,933	-		MPMX19_03797	0.67	+1.7
32,933	-		MPMX19_03797	0.67	-1.0
32,933	-		MPMX19_03797	0.67	-2.5
33,003	+		MPMX19_03797	0.73	+0.4
33,003	+		MPMX19_03797	0.73	+0.1
33,004	-		MPMX19_03797	0.73	+0.4
33,011	+		MPMX19_03797	0.73	+1.2
33,082	+		MPMX19_03797	0.79	-0.6
33,082	+		MPMX19_03797	0.79	-0.3
33,083	-		MPMX19_03797	0.79	-1.7
33,083	-		MPMX19_03797	0.79	-2.0
33,175	+		MPMX19_03797	0.87	+1.1
33,175	+		MPMX19_03797	0.87	-0.8
33,175	+		MPMX19_03797	0.87	-0.2
33,176	-		MPMX19_03797	0.87	-1.1
33,176	-		MPMX19_03797	0.87	-0.8
33,176	-		MPMX19_03797	0.87	-0.5
33,214	+				-0.3
33,214	+				-0.4
33,214	+				-0.4
33,214	+				-0.3
33,214	+				+0.4
33,214	+				+1.5
33,215	-				-1.4
33,215	-				-0.8
33,215	-				-0.3
33,284	-				+0.2
33,284	-				-0.6
33,334	+				+0.4
33,418	-				-2.3
33,419	+				+1.7
33,612	-		MPMX19_03798	0.17	-0.8
33,630	-		MPMX19_03798	0.19	-0.3
33,716	+		MPMX19_03798	0.29	-1.3
33,717	-		MPMX19_03798	0.29	-1.4
33,792	+		MPMX19_03798	0.37	+0.2
33,792	+		MPMX19_03798	0.37	-1.1
33,795	-		MPMX19_03798	0.38	+1.0
33,795	-		MPMX19_03798	0.38	-1.1
33,804	+		MPMX19_03798	0.39	-1.2
33,805	-		MPMX19_03798	0.39	+0.2
33,807	-		MPMX19_03798	0.39	+0.7
33,826	+		MPMX19_03798	0.41	-0.1
33,983	+		MPMX19_03798	0.59	-1.4