Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03678

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,115,462	+		MPMX19_03677	0.61	-1.5
1,115,462	+		MPMX19_03677	0.61	-0.8
1,115,462	+		MPMX19_03677	0.61	-0.1
1,115,463	-		MPMX19_03677	0.61	-2.5
1,115,463	-		MPMX19_03677	0.61	-0.6
1,115,463	-		MPMX19_03677	0.61	-0.2
1,115,481	+		MPMX19_03677	0.63	-1.7
1,115,481	+		MPMX19_03677	0.63	+0.2
1,115,482	-		MPMX19_03677	0.63	-0.2
1,115,576	+		MPMX19_03677	0.71	+0.7
1,115,623	+		MPMX19_03677	0.75	+0.1
1,115,675	+		MPMX19_03677	0.80	+0.7
1,115,675	+		MPMX19_03677	0.80	+0.6
1,115,675	+		MPMX19_03677	0.80	+0.2
1,115,675	+		MPMX19_03677	0.80	+1.1
1,115,675	+		MPMX19_03677	0.80	+0.1
1,115,675	+		MPMX19_03677	0.80	-1.5
1,115,675	+		MPMX19_03677	0.80	-0.2
1,115,675	+		MPMX19_03677	0.80	-2.1
1,115,675	+		MPMX19_03677	0.80	-1.0
1,115,675	+		MPMX19_03677	0.80	-1.2
1,115,675	+		MPMX19_03677	0.80	-1.0
1,115,675	+		MPMX19_03677	0.80	-1.2
1,115,675	+		MPMX19_03677	0.80	-0.1
1,115,675	+		MPMX19_03677	0.80	+0.2
1,115,675	+		MPMX19_03677	0.80	-1.4
1,115,675	+		MPMX19_03677	0.80	-0.1
1,115,675	+		MPMX19_03677	0.80	+0.6
1,115,675	+		MPMX19_03677	0.80	-1.3
1,115,675	+		MPMX19_03677	0.80	+0.1
1,115,675	+		MPMX19_03677	0.80	-1.4
1,115,675	+		MPMX19_03677	0.80	+0.4
1,115,675	+		MPMX19_03677	0.80	-2.0
1,115,675	+		MPMX19_03677	0.80	-1.3
1,115,676	-		MPMX19_03677	0.80	-0.0
1,115,676	-		MPMX19_03677	0.80	-1.2
1,115,676	-		MPMX19_03677	0.80	-0.9
1,115,676	-		MPMX19_03677	0.80	-1.5
1,115,676	-		MPMX19_03677	0.80	+0.1
1,115,676	-		MPMX19_03677	0.80	-0.6
1,115,676	-		MPMX19_03677	0.80	+0.6
1,115,676	-		MPMX19_03677	0.80	-0.2
1,115,676	-		MPMX19_03677	0.80	-0.7
1,115,676	-		MPMX19_03677	0.80	+0.4
1,115,676	-		MPMX19_03677	0.80	-0.4
1,115,676	-		MPMX19_03677	0.80	-0.4
1,115,676	-		MPMX19_03677	0.80	-1.8
1,115,676	-		MPMX19_03677	0.80	+0.3
1,115,676	-		MPMX19_03677	0.80	-1.9
1,115,676	-		MPMX19_03677	0.80	-1.6
1,115,676	-		MPMX19_03677	0.80	-0.0
1,115,676	-		MPMX19_03677	0.80	+0.7
1,115,676	-		MPMX19_03677	0.80	-0.7
1,115,676	-		MPMX19_03677	0.80	-0.3
1,115,676	-		MPMX19_03677	0.80	-0.4
1,115,676	-		MPMX19_03677	0.80	-0.3
1,115,676	-		MPMX19_03677	0.80	-1.0
1,115,676	-		MPMX19_03677	0.80	-1.2
1,115,676	-		MPMX19_03677	0.80	-0.5
1,115,843	+				-1.1
1,115,843	+				+1.0
1,115,843	+				-2.2
1,115,844	-				-1.6
1,115,844	-				-0.1
1,115,844	-				-0.2
1,115,844	-				-0.8
1,115,844	-				-0.0
1,115,928	+				+0.2
1,115,928	+				-1.1
1,115,928	+				-1.4
1,115,928	+				-0.5
1,115,929	-				-1.4
1,115,929	-				-0.1
1,115,978	+				+0.3
1,115,978	+				-0.2
1,115,978	+				-0.5
1,115,978	+				+0.7
1,115,978	+				-0.2
1,115,978	+				+0.4
1,115,979	-				+0.0
1,115,979	-				+0.8
1,115,979	-				+0.6
1,115,979	-				-0.3
1,115,979	-				-0.4
1,117,207	+		MPMX19_03678	0.69	-2.1
1,117,208	-		MPMX19_03678	0.69	-0.3
1,117,208	-		MPMX19_03678	0.69	-2.5
1,117,208	-		MPMX19_03678	0.69	+0.3
1,117,208	-		MPMX19_03678	0.69	-0.3
1,117,208	-		MPMX19_03678	0.69	-1.3
1,117,208	-		MPMX19_03678	0.69	-2.0
1,117,255	+		MPMX19_03678	0.72	+0.2
1,117,256	-		MPMX19_03678	0.72	-0.8
1,117,256	-		MPMX19_03678	0.72	+0.6
1,117,256	-		MPMX19_03678	0.72	-1.5
1,117,441	+		MPMX19_03678	0.83	-1.2
1,117,441	+		MPMX19_03678	0.83	-1.7
1,117,441	-		MPMX19_03678	0.83	-0.8
1,117,442	-		MPMX19_03678	0.83	-0.3
1,117,442	-		MPMX19_03678	0.83	+2.2
1,117,442	-		MPMX19_03678	0.83	-1.9
1,117,447	+		MPMX19_03678	0.83	+0.6
1,117,448	-		MPMX19_03678	0.83	-0.7
1,117,448	-		MPMX19_03678	0.83	-0.6
1,117,459	+		MPMX19_03678	0.84	-0.0
1,117,459	+		MPMX19_03678	0.84	-0.0
1,117,459	+		MPMX19_03678	0.84	-1.7
1,117,460	-		MPMX19_03678	0.84	-0.0
1,117,555	+		MPMX19_03678	0.90	+1.0
1,117,555	+		MPMX19_03678	0.90	-0.9
1,117,555	+		MPMX19_03678	0.90	+0.1
1,117,555	+		MPMX19_03678	0.90	-2.1
1,117,556	-		MPMX19_03678	0.90	-1.0
1,117,556	-		MPMX19_03678	0.90	-0.2
1,117,556	-		MPMX19_03678	0.90	+0.6
1,117,740	+				-0.6
1,117,740	+				-0.8
1,117,740	+				+0.6
1,117,741	-				+1.8
1,117,741	-				-0.0
1,117,741	-				-0.3
1,117,741	-				-1.0
1,117,741	-				+0.2
1,117,741	-				-0.8
1,118,507	+				-0.3
1,118,630	+		MPMX19_03680	0.16	+0.5