Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03668

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,104,360	+		MPMX19_03666	0.39	-0.4
1,104,360	+		MPMX19_03666	0.39	-0.1
1,104,360	+		MPMX19_03666	0.39	-0.3
1,104,426	+		MPMX19_03666	0.54	-0.3
1,104,427	-		MPMX19_03666	0.54	-0.9
1,104,427	-		MPMX19_03666	0.54	-0.3
1,104,537	+		MPMX19_03666	0.79	+0.1
1,104,537	+		MPMX19_03666	0.79	-1.0
1,104,537	+		MPMX19_03666	0.79	-1.9
1,104,537	+		MPMX19_03666	0.79	-0.2
1,104,538	-		MPMX19_03666	0.79	-1.1
1,104,538	-		MPMX19_03666	0.79	-0.0
1,104,538	-		MPMX19_03666	0.79	+0.3
1,104,538	-		MPMX19_03666	0.79	+1.6
1,104,538	-		MPMX19_03666	0.79	-0.2
1,104,538	-		MPMX19_03666	0.79	-0.3
1,104,538	-		MPMX19_03666	0.79	-0.4
1,105,076	+		MPMX19_03667	0.62	-0.2
1,105,076	+		MPMX19_03667	0.62	-0.2
1,105,076	+		MPMX19_03667	0.62	-0.5
1,105,076	+		MPMX19_03667	0.62	-2.1
1,105,076	+		MPMX19_03667	0.62	-0.8
1,105,076	+		MPMX19_03667	0.62	+0.2
1,105,076	+		MPMX19_03667	0.62	-0.7
1,105,077	-		MPMX19_03667	0.62	+0.8
1,105,077	-		MPMX19_03667	0.62	-0.5
1,105,077	-		MPMX19_03667	0.62	+1.1
1,105,077	-		MPMX19_03667	0.62	-2.1
1,105,077	-		MPMX19_03667	0.62	+1.2
1,105,077	-		MPMX19_03667	0.62	-0.3
1,105,304	+				-0.4
1,105,304	+				-1.6
1,105,304	+				-0.7
1,105,304	+				-1.5
1,105,304	+				-3.5
1,105,305	-				-0.8
1,105,305	-				-0.8
1,105,305	-				-1.3
1,105,305	-				-0.8
1,105,305	-				-0.9
1,105,305	-				+0.4
1,105,305	-				+1.2
1,105,305	-				+0.3
1,105,305	-				-2.1
1,105,305	-				-1.0
1,105,305	-				-0.0
1,105,453	+		MPMX19_03668	0.16	-2.2
1,105,453	+		MPMX19_03668	0.16	-0.7
1,105,453	+		MPMX19_03668	0.16	-2.0
1,105,453	+		MPMX19_03668	0.16	-0.9
1,105,453	+		MPMX19_03668	0.16	-1.1
1,105,453	+		MPMX19_03668	0.16	-1.1
1,105,453	+		MPMX19_03668	0.16	-0.6
1,105,453	+		MPMX19_03668	0.16	-0.0
1,105,453	+		MPMX19_03668	0.16	-0.8
1,105,453	+		MPMX19_03668	0.16	-0.7
1,105,454	-		MPMX19_03668	0.16	-1.4
1,105,454	-		MPMX19_03668	0.16	+0.2
1,105,454	-		MPMX19_03668	0.16	-0.2
1,105,454	-		MPMX19_03668	0.16	-0.8
1,105,454	-		MPMX19_03668	0.16	-0.3
1,105,454	-		MPMX19_03668	0.16	-0.9
1,105,454	-		MPMX19_03668	0.16	-1.3
1,105,454	-		MPMX19_03668	0.16	-0.8
1,105,454	-		MPMX19_03668	0.16	-1.0
1,105,492	+		MPMX19_03668	0.21	+0.8
1,105,492	+		MPMX19_03668	0.21	-1.0
1,105,493	-		MPMX19_03668	0.21	+0.2
1,105,735	+		MPMX19_03668	0.52	-1.5
1,106,068	+				-0.1
1,106,068	+				-0.7
1,106,068	+				-0.2
1,106,068	+				-0.2
1,106,068	+				-0.9
1,106,068	+				+0.5
1,106,068	+				-1.8
1,106,068	+				+0.2
1,106,068	+				-1.0
1,106,069	-				+0.7
1,106,069	-				-1.2
1,106,069	-				+0.4
1,106,069	-				+0.6
1,106,069	-				+0.9
1,106,069	-				-0.6
1,106,069	-				-1.8
1,106,202	+		MPMX19_03669	0.12	+0.5
1,106,203	-		MPMX19_03669	0.12	-0.5
1,106,203	-		MPMX19_03669	0.12	-0.4
1,106,451	+		MPMX19_03669	0.43	-2.2
1,106,451	+		MPMX19_03669	0.43	+0.6
1,106,451	+		MPMX19_03669	0.43	-0.5
1,106,451	+		MPMX19_03669	0.43	-0.6
1,106,451	+		MPMX19_03669	0.43	+1.0
1,106,452	-		MPMX19_03669	0.44	-1.0
1,106,452	-		MPMX19_03669	0.44	-0.0
1,106,452	-		MPMX19_03669	0.44	-0.8
1,106,452	-		MPMX19_03669	0.44	-0.3
1,106,452	-		MPMX19_03669	0.44	-0.6
1,106,493	+		MPMX19_03669	0.49	+0.8
1,106,494	-		MPMX19_03669	0.49	-1.4
1,106,664	+		MPMX19_03669	0.71	+0.1
1,106,664	+		MPMX19_03669	0.71	-1.5
1,106,664	+		MPMX19_03669	0.71	-0.4
1,106,664	+		MPMX19_03669	0.71	-1.2
1,106,664	+		MPMX19_03669	0.71	-0.8
1,106,664	+		MPMX19_03669	0.71	+0.5
1,106,664	+		MPMX19_03669	0.71	-1.6
1,106,665	-		MPMX19_03669	0.71	-0.4
1,106,665	-		MPMX19_03669	0.71	-0.6
1,106,808	+		MPMX19_03669	0.89	-0.9
1,106,809	-		MPMX19_03669	0.89	+0.7
1,106,843	+				-1.0
1,106,843	+				-0.7
1,106,844	-				+0.6
1,106,844	-				-0.4
1,106,900	+				-0.8
1,106,900	+				-0.8
1,106,900	+				-1.6
1,106,900	+				-0.7
1,106,900	+				+0.7
1,106,900	+				-1.4
1,106,901	-				-0.6
1,106,901	-				-1.2
1,106,901	-				+0.4
1,106,901	-				-0.8
1,106,901	-				-0.5
1,106,901	-				-0.0
1,106,901	-				-0.3
1,106,901	-				+0.2
1,106,901	-				-0.8
1,106,933	+				-0.0
1,106,933	+				+0.1
1,106,933	+				+0.7
1,106,933	+				-0.0
1,106,934	-				-1.2
1,106,934	-				-1.7
1,106,934	-				+0.3
1,106,934	-				+0.3
1,106,936	+				-0.4
1,106,936	+				-0.4
1,106,936	+				-1.1
1,106,936	+				-1.3
1,106,936	+				-0.5
1,106,937	-				+0.3
1,106,937	-				+0.2
1,106,937	-				+0.3
1,106,950	+				+0.6
1,106,951	-				+1.3
1,107,083	+		MPMX19_03670	0.18	-0.9
1,107,083	+		MPMX19_03670	0.18	-0.6
1,107,084	-		MPMX19_03670	0.18	-1.1
1,107,084	-		MPMX19_03670	0.18	-1.2
1,107,084	-		MPMX19_03670	0.18	-1.1
1,107,084	-		MPMX19_03670	0.18	-1.4
1,107,089	+		MPMX19_03670	0.19	+0.4
1,107,089	+		MPMX19_03670	0.19	+0.2
1,107,089	+		MPMX19_03670	0.19	-0.7
1,107,089	+		MPMX19_03670	0.19	-0.9
1,107,089	+		MPMX19_03670	0.19	-0.5
1,107,089	+		MPMX19_03670	0.19	+0.9
1,107,089	+		MPMX19_03670	0.19	-1.4
1,107,089	+		MPMX19_03670	0.19	-0.8
1,107,090	-		MPMX19_03670	0.19	+0.6
1,107,090	-		MPMX19_03670	0.19	-1.8
1,107,090	-		MPMX19_03670	0.19	+0.5
1,107,090	-		MPMX19_03670	0.19	-0.8
1,107,090	-		MPMX19_03670	0.19	+0.7
1,107,090	-		MPMX19_03670	0.19	-0.3
1,107,090	-		MPMX19_03670	0.19	-0.2