Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03665

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,102,420	+		MPMX19_03664	0.18	-1.4
1,102,420	+		MPMX19_03664	0.18	-0.6
1,102,420	+		MPMX19_03664	0.18	-0.8
1,102,421	-		MPMX19_03664	0.18	+0.3
1,102,464	-		MPMX19_03664	0.22	-0.9
1,102,778	+		MPMX19_03664	0.48	-0.3
1,102,778	+		MPMX19_03664	0.48	+1.0
1,102,778	+		MPMX19_03664	0.48	+0.2
1,102,779	-		MPMX19_03664	0.49	-0.2
1,102,779	-		MPMX19_03664	0.49	+1.4
1,103,048	+		MPMX19_03664	0.72	-1.9
1,103,048	+		MPMX19_03664	0.72	+0.9
1,103,048	+		MPMX19_03664	0.72	-0.8
1,103,048	+		MPMX19_03664	0.72	-0.8
1,103,048	+		MPMX19_03664	0.72	-1.9
1,103,049	-		MPMX19_03664	0.72	-1.3
1,103,049	-		MPMX19_03664	0.72	-1.7
1,103,049	-		MPMX19_03664	0.72	-0.4
1,103,049	-		MPMX19_03664	0.72	-1.1
1,103,049	-		MPMX19_03664	0.72	+1.2
1,103,049	-		MPMX19_03664	0.72	-0.2
1,103,049	-		MPMX19_03664	0.72	-0.5
1,103,049	-		MPMX19_03664	0.72	+0.8
1,103,049	-		MPMX19_03664	0.72	-1.2
1,103,049	-		MPMX19_03664	0.72	+0.1
1,103,049	-		MPMX19_03664	0.72	-1.0
1,103,078	+		MPMX19_03664	0.74	+0.9
1,103,078	+		MPMX19_03664	0.74	-0.8
1,103,078	+		MPMX19_03664	0.74	-0.4
1,103,078	+		MPMX19_03664	0.74	-0.5
1,103,079	-		MPMX19_03664	0.74	-0.0
1,103,079	-		MPMX19_03664	0.74	+0.2
1,103,079	-		MPMX19_03664	0.74	-0.4
1,103,079	-		MPMX19_03664	0.74	-0.4
1,103,079	-		MPMX19_03664	0.74	-1.1
1,103,079	-		MPMX19_03664	0.74	+0.0
1,103,153	+		MPMX19_03664	0.81	+0.3
1,103,154	-		MPMX19_03664	0.81	-0.5
1,103,154	-		MPMX19_03664	0.81	+0.6
1,103,268	+				-0.1
1,103,269	-				-0.1
1,103,279	+				+0.4
1,103,389	+				+1.6
1,103,389	+				-0.4
1,103,390	-				+0.9
1,103,390	-				+1.0
1,103,390	-				-0.1
1,103,390	-				-0.5
1,103,390	-				-0.0
1,103,390	-				-0.1
1,103,470	+		MPMX19_03665	0.11	+0.6
1,103,470	+		MPMX19_03665	0.11	+0.6
1,103,470	+		MPMX19_03665	0.11	+0.1
1,103,470	+		MPMX19_03665	0.11	-0.9
1,103,470	+		MPMX19_03665	0.11	-0.2
1,103,470	+		MPMX19_03665	0.11	+0.9
1,103,470	+		MPMX19_03665	0.11	+0.8
1,103,470	+		MPMX19_03665	0.11	-0.5
1,103,470	+		MPMX19_03665	0.11	-0.3
1,103,470	+		MPMX19_03665	0.11	-0.4
1,103,470	+		MPMX19_03665	0.11	-1.5
1,103,470	+		MPMX19_03665	0.11	+0.2
1,103,471	-		MPMX19_03665	0.11	-0.0
1,103,471	-		MPMX19_03665	0.11	+0.2
1,103,471	-		MPMX19_03665	0.11	+0.3
1,103,471	-		MPMX19_03665	0.11	-0.3
1,103,471	-		MPMX19_03665	0.11	-0.8
1,103,471	-		MPMX19_03665	0.11	-0.5
1,103,471	-		MPMX19_03665	0.11	+0.6
1,103,471	-		MPMX19_03665	0.11	-0.9
1,103,471	-		MPMX19_03665	0.11	+0.3
1,103,471	-		MPMX19_03665	0.11	-1.0
1,103,471	-		MPMX19_03665	0.11	-1.1
1,103,471	-		MPMX19_03665	0.11	-1.0
1,103,613	+		MPMX19_03665	0.29	-1.8
1,103,741	-		MPMX19_03665	0.44	-1.1
1,103,872	+		MPMX19_03665	0.61	+0.8
1,103,872	+		MPMX19_03665	0.61	+0.1
1,103,872	+		MPMX19_03665	0.61	-2.2
1,103,872	+		MPMX19_03665	0.61	+1.7
1,103,872	+		MPMX19_03665	0.61	+1.2
1,103,872	+		MPMX19_03665	0.61	+1.0
1,103,872	+		MPMX19_03665	0.61	-0.1
1,103,873	-		MPMX19_03665	0.61	-0.1
1,103,873	-		MPMX19_03665	0.61	+1.0
1,103,913	+		MPMX19_03665	0.66	-2.1
1,104,360	+		MPMX19_03666	0.39	-0.4
1,104,360	+		MPMX19_03666	0.39	-0.1
1,104,360	+		MPMX19_03666	0.39	-0.3
1,104,426	+		MPMX19_03666	0.54	-0.3
1,104,427	-		MPMX19_03666	0.54	-0.9
1,104,427	-		MPMX19_03666	0.54	-0.3
1,104,537	+		MPMX19_03666	0.79	+0.1
1,104,537	+		MPMX19_03666	0.79	-1.0
1,104,537	+		MPMX19_03666	0.79	-1.9
1,104,537	+		MPMX19_03666	0.79	-0.2
1,104,538	-		MPMX19_03666	0.79	-1.1
1,104,538	-		MPMX19_03666	0.79	-0.0
1,104,538	-		MPMX19_03666	0.79	+0.3
1,104,538	-		MPMX19_03666	0.79	+1.6
1,104,538	-		MPMX19_03666	0.79	-0.2
1,104,538	-		MPMX19_03666	0.79	-0.3
1,104,538	-		MPMX19_03666	0.79	-0.4
1,105,076	+		MPMX19_03667	0.62	-0.2
1,105,076	+		MPMX19_03667	0.62	-0.2
1,105,076	+		MPMX19_03667	0.62	-0.5
1,105,076	+		MPMX19_03667	0.62	-2.1
1,105,076	+		MPMX19_03667	0.62	-0.8
1,105,076	+		MPMX19_03667	0.62	+0.2
1,105,076	+		MPMX19_03667	0.62	-0.7
1,105,077	-		MPMX19_03667	0.62	+0.8
1,105,077	-		MPMX19_03667	0.62	-0.5
1,105,077	-		MPMX19_03667	0.62	+1.1
1,105,077	-		MPMX19_03667	0.62	-2.1
1,105,077	-		MPMX19_03667	0.62	+1.2
1,105,077	-		MPMX19_03667	0.62	-0.3