Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03652

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,089,329	+		MPMX19_03651	0.24	+0.5
1,089,329	+		MPMX19_03651	0.24	-0.7
1,089,329	+		MPMX19_03651	0.24	-0.0
1,089,329	+		MPMX19_03651	0.24	-0.0
1,089,330	-		MPMX19_03651	0.24	+0.8
1,089,330	-		MPMX19_03651	0.24	-0.0
1,089,330	-		MPMX19_03651	0.24	-1.9
1,089,455	+		MPMX19_03651	0.36	+1.0
1,089,455	+		MPMX19_03651	0.36	-1.4
1,089,455	+		MPMX19_03651	0.36	+0.7
1,089,455	+		MPMX19_03651	0.36	-1.0
1,089,455	+		MPMX19_03651	0.36	+1.2
1,089,455	+		MPMX19_03651	0.36	-2.0
1,089,456	-		MPMX19_03651	0.37	-1.1
1,089,456	-		MPMX19_03651	0.37	-0.7
1,089,456	-		MPMX19_03651	0.37	-1.8
1,089,456	-		MPMX19_03651	0.37	+1.6
1,089,456	-		MPMX19_03651	0.37	-0.4
1,089,456	-		MPMX19_03651	0.37	-0.2
1,089,456	-		MPMX19_03651	0.37	-0.9
1,089,592	+		MPMX19_03651	0.50	-2.4
1,089,592	+		MPMX19_03651	0.50	+0.6
1,089,592	+		MPMX19_03651	0.50	-1.2
1,089,592	+		MPMX19_03651	0.50	-0.8
1,089,592	+		MPMX19_03651	0.50	+1.2
1,089,593	-		MPMX19_03651	0.50	-0.4
1,089,593	-		MPMX19_03651	0.50	-0.6
1,089,593	-		MPMX19_03651	0.50	-0.6
1,089,593	-		MPMX19_03651	0.50	-1.6
1,089,644	+		MPMX19_03651	0.55	+0.6
1,089,644	+		MPMX19_03651	0.55	-0.4
1,089,644	+		MPMX19_03651	0.55	-1.2
1,089,644	+		MPMX19_03651	0.55	-1.4
1,089,644	+		MPMX19_03651	0.55	-0.5
1,089,644	+		MPMX19_03651	0.55	-0.3
1,089,644	+		MPMX19_03651	0.55	-1.8
1,089,644	+		MPMX19_03651	0.55	+0.1
1,089,644	+		MPMX19_03651	0.55	+1.0
1,089,644	+		MPMX19_03651	0.55	+1.2
1,089,644	+		MPMX19_03651	0.55	-1.9
1,089,644	+		MPMX19_03651	0.55	+0.9
1,089,644	+		MPMX19_03651	0.55	-0.4
1,089,644	+		MPMX19_03651	0.55	-0.4
1,089,644	+		MPMX19_03651	0.55	-0.6
1,089,644	+		MPMX19_03651	0.55	-1.6
1,089,644	+		MPMX19_03651	0.55	+0.4
1,089,644	+		MPMX19_03651	0.55	+0.4
1,089,644	+		MPMX19_03651	0.55	+0.4
1,089,644	+		MPMX19_03651	0.55	-0.4
1,089,644	+		MPMX19_03651	0.55	-2.0
1,089,644	+		MPMX19_03651	0.55	-0.2
1,089,644	+		MPMX19_03651	0.55	-1.5
1,089,644	+		MPMX19_03651	0.55	-2.4
1,089,644	+		MPMX19_03651	0.55	-0.4
1,089,644	+		MPMX19_03651	0.55	-0.6
1,089,644	+		MPMX19_03651	0.55	+0.7
1,089,644	+		MPMX19_03651	0.55	-1.0
1,089,644	+		MPMX19_03651	0.55	-0.5
1,089,644	+		MPMX19_03651	0.55	+0.6
1,089,644	+		MPMX19_03651	0.55	-0.0
1,089,645	-		MPMX19_03651	0.55	-1.2
1,089,645	-		MPMX19_03651	0.55	+0.2
1,089,645	-		MPMX19_03651	0.55	-1.0
1,089,645	-		MPMX19_03651	0.55	-1.4
1,089,645	-		MPMX19_03651	0.55	-1.4
1,089,645	-		MPMX19_03651	0.55	+0.7
1,089,645	-		MPMX19_03651	0.55	-1.4
1,089,645	-		MPMX19_03651	0.55	+1.6
1,089,645	-		MPMX19_03651	0.55	-2.2
1,089,645	-		MPMX19_03651	0.55	+0.1
1,089,645	-		MPMX19_03651	0.55	-0.6
1,089,645	-		MPMX19_03651	0.55	-1.4
1,089,645	-		MPMX19_03651	0.55	-0.1
1,089,645	-		MPMX19_03651	0.55	-0.3
1,089,645	-		MPMX19_03651	0.55	-1.9
1,089,645	-		MPMX19_03651	0.55	-0.4
1,089,645	-		MPMX19_03651	0.55	+2.2
1,089,645	-		MPMX19_03651	0.55	-1.6
1,089,645	-		MPMX19_03651	0.55	-1.2
1,089,645	-		MPMX19_03651	0.55	-0.0
1,089,645	-		MPMX19_03651	0.55	-1.0
1,089,645	-		MPMX19_03651	0.55	-0.4
1,089,743	+		MPMX19_03651	0.64	-0.4
1,089,743	+		MPMX19_03651	0.64	-0.2
1,089,744	-		MPMX19_03651	0.65	-0.7
1,089,744	-		MPMX19_03651	0.65	-1.8
1,089,941	+		MPMX19_03651	0.84	-1.1
1,089,941	+		MPMX19_03651	0.84	-0.8
1,089,941	+		MPMX19_03651	0.84	+0.2
1,089,941	+		MPMX19_03651	0.84	-0.7
1,089,941	+		MPMX19_03651	0.84	+0.1
1,089,941	+		MPMX19_03651	0.84	-1.3
1,089,942	-		MPMX19_03651	0.84	-0.4
1,089,942	-		MPMX19_03651	0.84	+0.6
1,089,942	-		MPMX19_03651	0.84	+0.2
1,089,942	-		MPMX19_03651	0.84	+0.8
1,089,942	-		MPMX19_03651	0.84	-0.0
1,089,942	-		MPMX19_03651	0.84	-1.0
1,089,942	-		MPMX19_03651	0.84	-1.0
1,089,942	-		MPMX19_03651	0.84	+0.4
1,090,211	-		MPMX19_03652	0.11	-1.8
1,090,211	-		MPMX19_03652	0.11	-1.5
1,090,211	-		MPMX19_03652	0.11	-2.1
1,090,211	-		MPMX19_03652	0.11	-1.4
1,090,297	+		MPMX19_03652	0.22	-0.4
1,090,444	+		MPMX19_03652	0.41	-0.7
1,090,444	+		MPMX19_03652	0.41	-0.2
1,090,444	+		MPMX19_03652	0.41	-2.4
1,090,445	-		MPMX19_03652	0.41	-0.4
1,090,445	-		MPMX19_03652	0.41	-1.1
1,090,445	-		MPMX19_03652	0.41	-1.9
1,090,445	-		MPMX19_03652	0.41	-1.7
1,090,445	-		MPMX19_03652	0.41	-1.2
1,090,591	+		MPMX19_03652	0.60	-1.7
1,090,591	+		MPMX19_03652	0.60	-1.0
1,090,592	-		MPMX19_03652	0.60	+0.6
1,090,858	+				+0.5
1,090,858	+				-0.8
1,090,858	+				-0.4
1,090,858	+				-1.4
1,090,858	+				-0.6
1,090,858	+				-1.3
1,090,858	+				-1.6
1,090,859	-				-1.5
1,090,859	-				-0.0
1,090,859	-				-1.4
1,090,859	-				-2.8
1,090,859	-				+1.1
1,090,859	-				-1.2
1,090,859	-				-0.2
1,090,876	+				-0.7
1,090,876	+				+1.1
1,090,876	+				-0.8
1,090,876	+				-1.4
1,090,876	+				-1.9
1,090,876	+				+0.8
1,090,876	+				-0.5
1,090,876	+				+1.2
1,090,876	+				+2.2
1,090,876	+				-0.0
1,090,876	+				-0.9
1,090,876	+				+0.6
1,090,877	-				-0.8
1,090,877	-				-0.1
1,090,877	-				+0.6
1,090,877	-				-1.1
1,090,877	-				-0.6
1,090,877	-				-1.4
1,090,877	-				-0.4
1,090,877	-				-1.6
1,090,877	-				-1.2
1,090,877	-				-0.8
1,091,092	+				-0.2
1,091,092	+				-1.4
1,091,092	+				-0.4
1,091,093	-				-1.6
1,091,093	-				-0.6
1,091,093	-				-0.2
1,091,175	+				-0.8
1,091,175	+				+0.1
1,091,175	+				-2.6
1,091,175	+				-2.0
1,091,175	+				-0.6
1,091,175	+				+1.0
1,091,176	-				-0.9
1,091,176	-				-0.8
1,091,176	-				-1.8
1,091,176	-				-1.8
1,091,176	-				-1.0
1,091,176	-				-2.2
1,091,176	-				-2.3
1,091,176	-				-1.1
1,091,250	+				-2.1
1,091,251	-				-0.2
1,091,251	-				-1.0
1,091,518	-		MPMX19_03653	0.28	-0.2
1,091,520	+		MPMX19_03653	0.28	-1.1
1,091,520	+		MPMX19_03653	0.28	-1.1
1,091,520	+		MPMX19_03653	0.28	-1.0
1,091,520	+		MPMX19_03653	0.28	+1.1
1,091,520	+		MPMX19_03653	0.28	-1.0
1,091,520	+		MPMX19_03653	0.28	+0.9
1,091,520	+		MPMX19_03653	0.28	-0.6
1,091,521	-		MPMX19_03653	0.28	-0.7
1,091,521	-		MPMX19_03653	0.28	-2.3
1,091,521	-		MPMX19_03653	0.28	-1.4
1,091,521	-		MPMX19_03653	0.28	-1.2
1,091,521	-		MPMX19_03653	0.28	+0.8
1,091,521	-		MPMX19_03653	0.28	-0.4
1,091,521	-		MPMX19_03653	0.28	+1.9
1,091,521	-		MPMX19_03653	0.28	-0.5
1,091,521	-		MPMX19_03653	0.28	-2.4
1,091,521	-		MPMX19_03653	0.28	-1.0
1,091,678	+		MPMX19_03653	0.38	-0.5
1,091,679	-		MPMX19_03653	0.38	-1.0
1,091,679	-		MPMX19_03653	0.38	-0.0
1,091,679	-		MPMX19_03653	0.38	+1.0
1,091,681	+		MPMX19_03653	0.39	-1.1
1,091,681	+		MPMX19_03653	0.39	-0.8
1,091,681	+		MPMX19_03653	0.39	-1.4
1,091,681	+		MPMX19_03653	0.39	-1.6
1,091,682	-		MPMX19_03653	0.39	-0.2
1,091,682	-		MPMX19_03653	0.39	-1.2
1,091,682	-		MPMX19_03653	0.39	-0.4
1,091,682	-		MPMX19_03653	0.39	+1.1