Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03648

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,085,138	-		MPMX19_03647	0.80	-1.7
1,085,344	+				-1.0
1,085,344	+				+0.2
1,085,364	-				+1.2
1,085,453	+				-0.6
1,085,454	-				-2.8
1,085,454	-				-0.6
1,085,563	+				+0.5
1,085,563	+				+0.7
1,085,564	-				-2.1
1,085,564	-				-0.0
1,085,564	-				+0.1
1,086,063	+		MPMX19_03648	0.18	-1.2
1,086,063	+		MPMX19_03648	0.18	+0.6
1,086,063	+		MPMX19_03648	0.18	-0.9
1,086,063	+		MPMX19_03648	0.18	-0.8
1,086,064	-		MPMX19_03648	0.18	-0.4
1,086,087	+		MPMX19_03648	0.20	+0.1
1,086,087	+		MPMX19_03648	0.20	+0.2
1,086,087	+		MPMX19_03648	0.20	+0.6
1,086,087	+		MPMX19_03648	0.20	+0.8
1,086,088	-		MPMX19_03648	0.20	-1.8
1,086,088	-		MPMX19_03648	0.20	+0.5
1,086,088	-		MPMX19_03648	0.20	+0.8
1,086,088	-		MPMX19_03648	0.20	+0.2
1,086,088	-		MPMX19_03648	0.20	-1.0
1,086,088	-		MPMX19_03648	0.20	+0.6
1,086,088	-		MPMX19_03648	0.20	+0.3
1,086,088	-		MPMX19_03648	0.20	+0.3
1,086,088	-		MPMX19_03648	0.20	+1.4
1,086,088	-		MPMX19_03648	0.20	-0.2
1,086,150	+		MPMX19_03648	0.24	-2.9
1,086,150	+		MPMX19_03648	0.24	-0.3
1,086,150	+		MPMX19_03648	0.24	+0.8
1,086,150	+		MPMX19_03648	0.24	-1.1
1,086,150	+		MPMX19_03648	0.24	-3.1
1,086,150	+		MPMX19_03648	0.24	+0.6
1,086,150	+		MPMX19_03648	0.24	-0.2
1,086,150	+		MPMX19_03648	0.24	+0.3
1,086,150	+		MPMX19_03648	0.24	-0.4
1,086,150	+		MPMX19_03648	0.24	+0.8
1,086,150	+		MPMX19_03648	0.24	-0.6
1,086,151	-		MPMX19_03648	0.25	+0.2
1,086,151	-		MPMX19_03648	0.25	-0.7
1,086,151	-		MPMX19_03648	0.25	-1.6
1,086,151	-		MPMX19_03648	0.25	-0.0
1,086,151	-		MPMX19_03648	0.25	-0.7
1,086,151	-		MPMX19_03648	0.25	-0.0
1,086,151	-		MPMX19_03648	0.25	-1.1
1,086,151	-		MPMX19_03648	0.25	+0.3
1,086,151	-		MPMX19_03648	0.25	-1.0
1,086,210	+		MPMX19_03648	0.29	-0.9
1,086,210	+		MPMX19_03648	0.29	-1.6
1,086,210	+		MPMX19_03648	0.29	+0.2
1,086,210	+		MPMX19_03648	0.29	-1.4
1,086,210	+		MPMX19_03648	0.29	-1.2
1,086,211	-		MPMX19_03648	0.29	+1.2
1,086,211	-		MPMX19_03648	0.29	+0.3
1,086,211	-		MPMX19_03648	0.29	+1.0
1,086,211	-		MPMX19_03648	0.29	-2.2
1,086,211	-		MPMX19_03648	0.29	-0.8
1,086,226	-		MPMX19_03648	0.30	-1.3
1,086,249	+		MPMX19_03648	0.32	-1.0
1,086,249	+		MPMX19_03648	0.32	+0.7
1,086,249	+		MPMX19_03648	0.32	+0.4
1,086,250	-		MPMX19_03648	0.32	+0.3
1,086,250	-		MPMX19_03648	0.32	-1.0
1,086,250	-		MPMX19_03648	0.32	-1.3
1,086,504	+		MPMX19_03648	0.51	-1.1
1,086,504	+		MPMX19_03648	0.51	-0.8
1,086,504	+		MPMX19_03648	0.51	-0.4
1,086,504	+		MPMX19_03648	0.51	+0.3
1,086,504	+		MPMX19_03648	0.51	+0.2
1,086,504	+		MPMX19_03648	0.51	-1.0
1,086,504	+		MPMX19_03648	0.51	+0.2
1,086,504	+		MPMX19_03648	0.51	+0.6
1,086,504	+		MPMX19_03648	0.51	-0.3
1,086,504	+		MPMX19_03648	0.51	-0.8
1,086,504	+		MPMX19_03648	0.51	+1.1
1,086,504	+		MPMX19_03648	0.51	+0.1
1,086,504	+		MPMX19_03648	0.51	-0.2
1,086,504	+		MPMX19_03648	0.51	-0.5
1,086,505	-		MPMX19_03648	0.52	+0.1
1,086,505	-		MPMX19_03648	0.52	-0.4
1,086,505	-		MPMX19_03648	0.52	-0.8
1,086,505	-		MPMX19_03648	0.52	+1.2
1,086,505	-		MPMX19_03648	0.52	-2.2
1,086,505	-		MPMX19_03648	0.52	-1.2
1,086,505	-		MPMX19_03648	0.52	-0.3
1,086,505	-		MPMX19_03648	0.52	-0.3
1,086,505	-		MPMX19_03648	0.52	-1.2
1,086,804	+		MPMX19_03648	0.74	+0.6
1,086,804	+		MPMX19_03648	0.74	+1.2
1,086,804	+		MPMX19_03648	0.74	+0.3
1,086,804	+		MPMX19_03648	0.74	-0.3
1,086,804	+		MPMX19_03648	0.74	+0.7
1,086,804	+		MPMX19_03648	0.74	-1.0
1,086,804	+		MPMX19_03648	0.74	-0.0
1,086,805	-		MPMX19_03648	0.74	-1.2
1,086,805	-		MPMX19_03648	0.74	-1.5
1,086,805	-		MPMX19_03648	0.74	-0.7
1,086,805	-		MPMX19_03648	0.74	-1.2
1,086,805	-		MPMX19_03648	0.74	-0.4
1,086,805	-		MPMX19_03648	0.74	-1.9
1,086,870	+		MPMX19_03648	0.79	-0.7
1,086,870	+		MPMX19_03648	0.79	-0.2
1,086,870	+		MPMX19_03648	0.79	-0.3
1,086,870	+		MPMX19_03648	0.79	-1.2
1,086,871	-		MPMX19_03648	0.79	-0.2
1,086,871	-		MPMX19_03648	0.79	-0.1
1,086,886	-		MPMX19_03648	0.81	-1.5
1,086,886	-		MPMX19_03648	0.81	-1.0
1,086,972	+		MPMX19_03648	0.87	-0.9
1,086,972	+		MPMX19_03648	0.87	-1.0
1,086,972	+		MPMX19_03648	0.87	+0.6
1,086,973	-		MPMX19_03648	0.87	-0.4
1,086,973	-		MPMX19_03648	0.87	-0.2
1,086,973	-		MPMX19_03648	0.87	-2.0
1,086,973	-		MPMX19_03648	0.87	+1.8
1,086,973	-		MPMX19_03648	0.87	-0.0
1,086,973	-		MPMX19_03648	0.87	+1.1
1,087,128	+				-2.0
1,087,129	-				-0.8
1,087,137	+				-1.2
1,087,137	+				-1.3
1,087,137	+				-1.4
1,087,137	+				-1.5
1,087,137	+				+0.1
1,087,137	+				+0.2
1,087,137	+				-0.6
1,087,137	+				-1.6
1,087,137	+				-0.2
1,087,137	+				+0.0
1,087,137	+				-0.8
1,087,138	-				-0.1
1,087,138	-				+0.8
1,087,138	-				-2.3
1,087,138	-				+0.7
1,087,138	-				+0.6
1,087,138	-				-1.9
1,087,175	+				+0.6
1,087,175	+				-0.2
1,087,175	+				+0.6
1,087,175	+				-0.1
1,087,175	+				-0.3
1,087,176	-				-1.4
1,087,176	-				-0.8
1,087,176	-				-0.1
1,087,176	-				+0.3
1,087,176	-				-1.9
1,087,305	+				-0.2
1,087,305	+				-1.7
1,087,305	+				-1.2
1,087,306	-				-1.2
1,087,306	-				-1.8
1,087,306	-				-0.4
1,087,306	-				-0.4
1,087,306	-				-2.4
1,087,309	+				-0.4
1,087,309	+				-1.0
1,087,309	+				-1.9
1,087,309	+				+1.0
1,087,310	-				-0.0
1,087,460	+		MPMX19_03649	0.11	-1.9
1,087,460	+		MPMX19_03649	0.11	-2.1
1,087,460	+		MPMX19_03649	0.11	-1.4
1,087,460	+		MPMX19_03649	0.11	+1.0
1,087,460	+		MPMX19_03649	0.11	-1.2
1,087,460	+		MPMX19_03649	0.11	-1.7
1,087,460	+		MPMX19_03649	0.11	-0.8
1,087,460	+		MPMX19_03649	0.11	-2.1
1,087,461	-		MPMX19_03649	0.11	-1.9
1,087,461	-		MPMX19_03649	0.11	-2.1
1,087,461	-		MPMX19_03649	0.11	-0.6
1,087,461	-		MPMX19_03649	0.11	-1.2
1,087,461	-		MPMX19_03649	0.11	-0.7
1,087,478	+		MPMX19_03649	0.13	-0.0
1,087,478	+		MPMX19_03649	0.13	-1.6
1,087,478	+		MPMX19_03649	0.13	+0.2
1,087,478	+		MPMX19_03649	0.13	-0.7
1,087,479	-		MPMX19_03649	0.14	-0.0
1,087,526	+		MPMX19_03649	0.19	-0.2
1,087,526	+		MPMX19_03649	0.19	+0.6
1,087,526	+		MPMX19_03649	0.19	+0.1
1,087,527	-		MPMX19_03649	0.19	-2.1
1,087,527	-		MPMX19_03649	0.19	+0.2
1,087,527	-		MPMX19_03649	0.19	-0.4
1,087,527	-		MPMX19_03649	0.19	-0.0
1,087,527	-		MPMX19_03649	0.19	-1.6
1,087,530	+		MPMX19_03649	0.19	-0.0
1,087,532	+		MPMX19_03649	0.20	-1.0
1,087,532	+		MPMX19_03649	0.20	+0.3
1,087,532	+		MPMX19_03649	0.20	-0.6
1,087,533	-		MPMX19_03649	0.20	-1.5
1,087,533	-		MPMX19_03649	0.20	-1.5
1,087,533	-		MPMX19_03649	0.20	+0.1
1,088,099	+		MPMX19_03649	0.85	-1.0
1,088,099	+		MPMX19_03649	0.85	+1.2
1,088,099	+		MPMX19_03649	0.85	-0.3
1,088,099	+		MPMX19_03649	0.85	-0.3
1,088,099	+		MPMX19_03649	0.85	-0.8
1,088,100	-		MPMX19_03649	0.85	-1.0
1,088,100	-		MPMX19_03649	0.85	-0.1
1,088,100	-		MPMX19_03649	0.85	-1.9
1,088,100	-		MPMX19_03649	0.85	-0.1
1,088,108	+		MPMX19_03649	0.86	-1.0
1,088,108	+		MPMX19_03649	0.86	+1.0
1,088,108	+		MPMX19_03649	0.86	+0.1
1,088,109	-		MPMX19_03649	0.86	-3.5
1,088,109	-		MPMX19_03649	0.86	-0.8
1,088,109	-		MPMX19_03649	0.86	+0.0
1,088,109	-		MPMX19_03649	0.86	-1.0