Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03635

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,070,614	+		MPMX19_03634	0.48	+2.2
1,070,614	+		MPMX19_03634	0.48	+0.2
1,070,615	-		MPMX19_03634	0.48	+1.6
1,070,644	+		MPMX19_03634	0.51	-1.6
1,070,644	+		MPMX19_03634	0.51	-1.7
1,070,644	+		MPMX19_03634	0.51	+0.9
1,070,644	+		MPMX19_03634	0.51	-0.4
1,070,644	+		MPMX19_03634	0.51	-2.3
1,070,645	-		MPMX19_03634	0.51	-1.6
1,070,645	-		MPMX19_03634	0.51	-1.0
1,070,645	-		MPMX19_03634	0.51	-1.0
1,070,645	-		MPMX19_03634	0.51	-1.2
1,070,645	-		MPMX19_03634	0.51	+0.6
1,070,645	-		MPMX19_03634	0.51	-1.0
1,070,645	-		MPMX19_03634	0.51	-0.4
1,070,845	+		MPMX19_03634	0.72	-0.8
1,070,846	-		MPMX19_03634	0.72	+1.3
1,070,846	-		MPMX19_03634	0.72	-0.5
1,071,104	-				+0.8
1,071,404	-		MPMX19_03635	0.36	-1.6
1,071,404	-		MPMX19_03635	0.36	-1.3
1,071,691	+				-2.8
1,071,691	+				-0.2
1,071,691	+				-0.5
1,071,691	+				-0.8
1,071,691	+				-0.3
1,071,691	+				+1.0
1,071,691	+				+0.6
1,071,691	+				+0.2
1,071,691	+				-0.6
1,071,691	+				-0.9
1,071,691	+				-2.7
1,071,691	+				-0.9
1,071,692	-				-0.3
1,071,692	-				-0.3
1,071,692	-				+0.2
1,071,692	-				-0.4
1,071,968	+		MPMX19_03636	0.16	-0.8
1,071,968	+		MPMX19_03636	0.16	+0.4
1,071,968	+		MPMX19_03636	0.16	-0.2
1,071,968	+		MPMX19_03636	0.16	-2.0
1,072,050	+		MPMX19_03636	0.25	+0.6
1,072,050	+		MPMX19_03636	0.25	-0.1
1,072,051	-		MPMX19_03636	0.26	-0.1
1,072,051	-		MPMX19_03636	0.26	-1.6
1,072,051	-		MPMX19_03636	0.26	-0.5
1,072,051	-		MPMX19_03636	0.26	+0.3
1,072,051	-		MPMX19_03636	0.26	-0.7
1,072,051	-		MPMX19_03636	0.26	-1.2
1,072,051	-		MPMX19_03636	0.26	-0.5
1,072,051	-		MPMX19_03636	0.26	+0.8
1,072,691	+				+1.1
1,072,692	-				-0.1
1,072,692	-				+0.2