Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03622

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,055,356	+		MPMX19_03621	0.42	+1.0
1,055,356	+		MPMX19_03621	0.42	-1.7
1,055,356	+		MPMX19_03621	0.42	+0.8
1,055,357	-		MPMX19_03621	0.42	-0.5
1,055,357	-		MPMX19_03621	0.42	-0.2
1,055,357	-		MPMX19_03621	0.42	+0.4
1,055,357	-		MPMX19_03621	0.42	-0.8
1,055,357	-		MPMX19_03621	0.42	-0.5
1,055,357	-		MPMX19_03621	0.42	-1.2
1,055,357	-		MPMX19_03621	0.42	+0.4
1,055,357	-		MPMX19_03621	0.42	+0.6
1,055,357	-		MPMX19_03621	0.42	-0.0
1,055,357	-		MPMX19_03621	0.42	-0.8
1,055,394	+		MPMX19_03621	0.45	-1.0
1,055,395	-		MPMX19_03621	0.45	+0.2
1,055,538	+		MPMX19_03621	0.56	-0.5
1,055,538	+		MPMX19_03621	0.56	-1.9
1,055,538	+		MPMX19_03621	0.56	-1.4
1,055,538	+		MPMX19_03621	0.56	-1.9
1,055,538	+		MPMX19_03621	0.56	+0.1
1,055,538	+		MPMX19_03621	0.56	-0.4
1,055,539	-		MPMX19_03621	0.57	+0.2
1,055,539	-		MPMX19_03621	0.57	+0.5
1,055,539	-		MPMX19_03621	0.57	-0.7
1,055,539	-		MPMX19_03621	0.57	-0.7
1,055,539	-		MPMX19_03621	0.57	-1.4
1,055,539	-		MPMX19_03621	0.57	+0.2
1,055,539	-		MPMX19_03621	0.57	-0.2
1,055,565	+		MPMX19_03621	0.59	-1.0
1,056,182	-				-0.3
1,056,182	-				-1.0
1,056,379	+				-2.6
1,056,380	-				-1.4
1,056,380	-				-0.3
1,056,487	-		MPMX19_03622	0.10	-1.2
1,056,912	+		MPMX19_03622	0.38	-0.4
1,056,912	+		MPMX19_03622	0.38	-0.8
1,056,912	+		MPMX19_03622	0.38	-0.2
1,056,912	+		MPMX19_03622	0.38	-0.4
1,056,912	+		MPMX19_03622	0.38	-1.0
1,056,912	+		MPMX19_03622	0.38	+0.8
1,056,912	+		MPMX19_03622	0.38	-0.7
1,056,912	+		MPMX19_03622	0.38	-1.8
1,056,912	+		MPMX19_03622	0.38	+0.1
1,056,912	+		MPMX19_03622	0.38	-1.4
1,056,912	+		MPMX19_03622	0.38	-0.3
1,056,912	+		MPMX19_03622	0.38	+1.3
1,056,912	+		MPMX19_03622	0.38	-1.0
1,056,913	-		MPMX19_03622	0.38	-0.3
1,056,913	-		MPMX19_03622	0.38	-0.4
1,056,913	-		MPMX19_03622	0.38	+0.1
1,056,913	-		MPMX19_03622	0.38	-0.8
1,056,913	-		MPMX19_03622	0.38	-1.7
1,056,913	-		MPMX19_03622	0.38	-1.1
1,056,913	-		MPMX19_03622	0.38	-0.8
1,056,913	-		MPMX19_03622	0.38	+0.3
1,056,913	-		MPMX19_03622	0.38	-0.3
1,056,913	-		MPMX19_03622	0.38	-0.0
1,056,913	-		MPMX19_03622	0.38	-0.6
1,056,913	-		MPMX19_03622	0.38	-0.9
1,056,913	-		MPMX19_03622	0.38	-0.9
1,056,913	-		MPMX19_03622	0.38	-3.2
1,056,913	-		MPMX19_03622	0.38	+0.1
1,056,913	-		MPMX19_03622	0.38	-0.6
1,056,913	-		MPMX19_03622	0.38	-1.1
1,057,323	+		MPMX19_03622	0.66	-0.4
1,057,323	+		MPMX19_03622	0.66	-1.2
1,057,323	+		MPMX19_03622	0.66	+0.6
1,057,323	+		MPMX19_03622	0.66	-0.6
1,057,323	+		MPMX19_03622	0.66	-0.4
1,057,324	-		MPMX19_03622	0.66	+0.3
1,057,324	-		MPMX19_03622	0.66	+1.8
1,057,324	-		MPMX19_03622	0.66	+0.6
1,057,626	+		MPMX19_03622	0.86	+0.0
1,057,626	+		MPMX19_03622	0.86	-1.0
1,057,626	+		MPMX19_03622	0.86	-0.7
1,057,626	+		MPMX19_03622	0.86	+0.3
1,057,626	+		MPMX19_03622	0.86	-0.8
1,057,626	+		MPMX19_03622	0.86	+0.7
1,057,626	+		MPMX19_03622	0.86	-1.3
1,057,626	+		MPMX19_03622	0.86	-0.9
1,057,626	+		MPMX19_03622	0.86	+0.2
1,057,626	+		MPMX19_03622	0.86	-0.3
1,057,626	+		MPMX19_03622	0.86	-1.8
1,057,626	+		MPMX19_03622	0.86	+0.6
1,057,626	+		MPMX19_03622	0.86	-1.2
1,057,626	+		MPMX19_03622	0.86	-0.9
1,057,626	+		MPMX19_03622	0.86	-1.0
1,057,626	+		MPMX19_03622	0.86	-0.1
1,057,626	+		MPMX19_03622	0.86	-0.6
1,057,626	+		MPMX19_03622	0.86	-2.1
1,057,626	+		MPMX19_03622	0.86	-1.6
1,057,627	-		MPMX19_03622	0.86	-1.4
1,057,627	-		MPMX19_03622	0.86	+0.2
1,057,627	-		MPMX19_03622	0.86	-1.6
1,057,627	-		MPMX19_03622	0.86	-0.3
1,057,627	-		MPMX19_03622	0.86	-0.4
1,057,627	-		MPMX19_03622	0.86	-0.0
1,057,627	-		MPMX19_03622	0.86	-0.0
1,057,627	-		MPMX19_03622	0.86	-0.3
1,057,627	-		MPMX19_03622	0.86	-0.5
1,057,627	-		MPMX19_03622	0.86	+0.3
1,057,627	-		MPMX19_03622	0.86	+0.7
1,057,627	-		MPMX19_03622	0.86	+0.1
1,057,674	-		MPMX19_03622	0.89	-1.2
1,058,212	+		MPMX19_03623	0.40	-0.4
1,058,213	-		MPMX19_03623	0.41	-0.0
1,058,313	+		MPMX19_03623	0.50	+1.4
1,058,314	-		MPMX19_03623	0.50	+0.2
1,058,341	+		MPMX19_03623	0.53	+0.7
1,058,342	-		MPMX19_03623	0.53	+0.3
1,058,353	+		MPMX19_03623	0.54	-1.7
1,058,353	+		MPMX19_03623	0.54	-0.6
1,058,353	+		MPMX19_03623	0.54	-0.2
1,058,353	+		MPMX19_03623	0.54	+0.8
1,058,354	-		MPMX19_03623	0.54	+0.1
1,058,354	-		MPMX19_03623	0.54	+0.2
1,058,356	+		MPMX19_03623	0.54	-0.3
1,058,357	-		MPMX19_03623	0.54	-1.0
1,058,357	-		MPMX19_03623	0.54	-1.1
1,058,357	-		MPMX19_03623	0.54	+0.3
1,058,357	-		MPMX19_03623	0.54	-2.0
1,058,452	+		MPMX19_03623	0.64	-0.5
1,058,452	+		MPMX19_03623	0.64	-0.6
1,058,452	+		MPMX19_03623	0.64	+0.4
1,058,453	-		MPMX19_03623	0.64	-1.0
1,058,453	-		MPMX19_03623	0.64	-0.8
1,058,453	-		MPMX19_03623	0.64	-0.9
1,058,453	-		MPMX19_03623	0.64	-1.1
1,058,453	-		MPMX19_03623	0.64	+0.6
1,058,453	-		MPMX19_03623	0.64	-1.9
1,058,453	-		MPMX19_03623	0.64	-0.0
1,058,453	-		MPMX19_03623	0.64	-0.8
1,058,453	-		MPMX19_03623	0.64	-0.0
1,058,453	-		MPMX19_03623	0.64	-0.3
1,058,530	+		MPMX19_03623	0.71	-0.5
1,058,530	+		MPMX19_03623	0.71	-0.8
1,058,530	+		MPMX19_03623	0.71	-1.5
1,058,530	+		MPMX19_03623	0.71	-0.9
1,058,530	+		MPMX19_03623	0.71	-0.4
1,058,531	-		MPMX19_03623	0.71	+0.3
1,058,531	-		MPMX19_03623	0.71	+0.4
1,058,531	-		MPMX19_03623	0.71	-0.3
1,058,531	-		MPMX19_03623	0.71	+0.5
1,058,531	-		MPMX19_03623	0.71	-1.1
1,058,572	+		MPMX19_03623	0.75	-1.0
1,058,572	+		MPMX19_03623	0.75	+0.3
1,058,572	+		MPMX19_03623	0.75	-1.0
1,058,572	+		MPMX19_03623	0.75	-0.1
1,058,572	+		MPMX19_03623	0.75	+0.7
1,058,572	+		MPMX19_03623	0.75	-1.1
1,058,572	+		MPMX19_03623	0.75	+0.9
1,058,572	+		MPMX19_03623	0.75	-1.6
1,058,572	+		MPMX19_03623	0.75	-1.5
1,058,572	+		MPMX19_03623	0.75	+1.1
1,058,572	+		MPMX19_03623	0.75	-1.2
1,058,572	+		MPMX19_03623	0.75	-0.0
1,058,572	+		MPMX19_03623	0.75	+0.3
1,058,572	+		MPMX19_03623	0.75	-0.0
1,058,572	+		MPMX19_03623	0.75	-0.0
1,058,572	+		MPMX19_03623	0.75	-0.3
1,058,572	+		MPMX19_03623	0.75	-0.5
1,058,572	+		MPMX19_03623	0.75	-1.2
1,058,573	-		MPMX19_03623	0.75	-0.0
1,058,573	-		MPMX19_03623	0.75	-0.8
1,058,573	-		MPMX19_03623	0.75	-1.2
1,058,573	-		MPMX19_03623	0.75	-0.9
1,058,573	-		MPMX19_03623	0.75	-0.0
1,058,573	-		MPMX19_03623	0.75	-0.7
1,058,573	-		MPMX19_03623	0.75	+0.3
1,058,573	-		MPMX19_03623	0.75	-0.0
1,058,573	-		MPMX19_03623	0.75	+0.9
1,058,573	-		MPMX19_03623	0.75	-0.2
1,058,573	-		MPMX19_03623	0.75	+0.2
1,058,761	+				-1.6