Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03616

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,045,375	+		MPMX19_03615	0.64	+0.6
1,045,375	+		MPMX19_03615	0.64	+0.5
1,045,375	+		MPMX19_03615	0.64	+0.2
1,045,375	+		MPMX19_03615	0.64	+0.1
1,045,375	+		MPMX19_03615	0.64	-1.1
1,045,375	+		MPMX19_03615	0.64	-0.2
1,045,375	+		MPMX19_03615	0.64	+0.7
1,045,376	-		MPMX19_03615	0.65	-1.8
1,045,376	-		MPMX19_03615	0.65	-0.6
1,045,376	-		MPMX19_03615	0.65	-0.9
1,045,376	-		MPMX19_03615	0.65	-1.2
1,045,376	-		MPMX19_03615	0.65	-1.4
1,045,376	-		MPMX19_03615	0.65	-3.2
1,045,376	-		MPMX19_03615	0.65	-1.0
1,045,376	-		MPMX19_03615	0.65	+1.3
1,045,376	-		MPMX19_03615	0.65	-0.2
1,045,419	+		MPMX19_03615	0.67	-0.8
1,045,419	+		MPMX19_03615	0.67	+0.4
1,045,419	+		MPMX19_03615	0.67	+1.8
1,045,419	+		MPMX19_03615	0.67	-1.0
1,045,419	+		MPMX19_03615	0.67	+0.3
1,045,419	+		MPMX19_03615	0.67	+0.2
1,045,419	+		MPMX19_03615	0.67	-0.2
1,045,419	+		MPMX19_03615	0.67	-1.4
1,045,420	-		MPMX19_03615	0.67	-1.8
1,045,420	-		MPMX19_03615	0.67	-0.3
1,045,420	-		MPMX19_03615	0.67	-0.4
1,045,420	-		MPMX19_03615	0.67	-0.2
1,045,420	-		MPMX19_03615	0.67	-0.8
1,045,584	+		MPMX19_03615	0.76	-0.7
1,045,584	+		MPMX19_03615	0.76	-0.1
1,045,584	+		MPMX19_03615	0.76	-0.3
1,045,585	-		MPMX19_03615	0.76	-2.1
1,045,585	-		MPMX19_03615	0.76	+1.2
1,045,605	+		MPMX19_03615	0.77	-0.8
1,045,605	+		MPMX19_03615	0.77	+0.1
1,045,606	-		MPMX19_03615	0.77	+1.0
1,045,606	-		MPMX19_03615	0.77	-0.9
1,045,750	+		MPMX19_03615	0.85	-1.1
1,045,750	+		MPMX19_03615	0.85	-0.2
1,045,750	+		MPMX19_03615	0.85	-0.8
1,045,750	+		MPMX19_03615	0.85	+1.2
1,045,751	-		MPMX19_03615	0.86	-0.1
1,045,751	-		MPMX19_03615	0.86	-0.6
1,045,752	+		MPMX19_03615	0.86	-0.4
1,045,752	+		MPMX19_03615	0.86	-0.4
1,045,752	+		MPMX19_03615	0.86	-1.0
1,045,752	+		MPMX19_03615	0.86	-1.0
1,045,752	+		MPMX19_03615	0.86	-0.8
1,045,752	+		MPMX19_03615	0.86	-1.0
1,045,753	-		MPMX19_03615	0.86	-1.2
1,045,753	-		MPMX19_03615	0.86	+0.0
1,045,753	-		MPMX19_03615	0.86	+0.2
1,045,753	-		MPMX19_03615	0.86	-1.2
1,045,753	-		MPMX19_03615	0.86	-1.9
1,045,798	-		MPMX19_03615	0.88	+0.1
1,045,798	-		MPMX19_03615	0.88	-1.6
1,045,798	-		MPMX19_03615	0.88	-1.0
1,046,080	+				-0.4
1,046,080	+				-2.3
1,046,080	+				-1.2
1,046,080	+				-0.5
1,046,080	+				-1.1
1,046,080	+				-0.8
1,046,081	-				+0.2
1,046,112	+				-0.3
1,046,112	+				-0.5
1,046,113	-				+0.4
1,046,113	-				+0.1
1,046,113	-				-0.5
1,046,121	+				-1.7
1,046,121	+				-1.0
1,046,121	+				-0.3
1,046,121	+				-1.4
1,046,121	+				+0.6
1,046,121	+				-0.5
1,046,121	+				+0.4
1,046,121	+				-0.4
1,046,121	+				+0.3
1,046,121	+				-0.4
1,046,122	-				-1.2
1,046,122	-				-0.0
1,046,122	-				-1.2
1,046,122	-				+1.7
1,046,122	-				+0.6
1,046,216	+				-1.5
1,046,221	+				+0.1
1,046,221	+				-0.9
1,046,221	+				-0.2
1,046,221	+				+0.5
1,046,221	+				-1.0
1,046,221	+				+0.8
1,046,221	+				-0.2
1,046,221	+				-0.1
1,046,221	+				-0.2
1,046,221	+				-0.3
1,046,221	+				-0.2
1,046,221	+				-0.5
1,046,221	+				-0.8
1,046,221	+				-0.0
1,046,221	+				-0.8
1,046,221	+				-0.2
1,046,221	+				-0.7
1,046,221	+				-0.0
1,046,221	+				-0.2
1,046,221	+				-0.8
1,046,221	+				-0.8
1,046,222	-				-0.3
1,046,222	-				-0.0
1,046,222	-				-1.2
1,046,222	-				-1.5
1,046,222	-				-0.3
1,046,222	-				-1.1
1,046,222	-				-1.9
1,046,222	-				-1.1
1,046,222	-				-0.0
1,046,222	-				-1.4
1,046,222	-				-1.8
1,046,222	-				-1.4
1,046,222	-				-2.0
1,046,222	-				+0.5
1,046,222	-				-1.5
1,046,222	-				-1.3
1,046,222	-				-2.4
1,046,275	+				-0.4
1,046,276	-				-0.0
1,046,318	+				-1.3
1,046,724	+		MPMX19_03616	0.15	-0.4
1,046,724	+		MPMX19_03616	0.15	-0.5
1,046,725	-		MPMX19_03616	0.15	-0.9
1,046,725	-		MPMX19_03616	0.15	+1.0
1,046,725	-		MPMX19_03616	0.15	-1.2
1,046,725	-		MPMX19_03616	0.15	+0.2
1,046,725	-		MPMX19_03616	0.15	+0.2
1,046,943	+		MPMX19_03616	0.23	-0.5
1,046,944	-		MPMX19_03616	0.23	+0.1
1,046,944	-		MPMX19_03616	0.23	-1.4
1,048,167	+		MPMX19_03616	0.70	-1.3
1,048,167	+		MPMX19_03616	0.70	-1.7
1,048,167	+		MPMX19_03616	0.70	-2.0
1,048,168	-		MPMX19_03616	0.71	+0.2
1,048,168	-		MPMX19_03616	0.71	-1.6
1,048,168	-		MPMX19_03616	0.71	+0.2
1,048,168	-		MPMX19_03616	0.71	-0.4
1,048,176	+		MPMX19_03616	0.71	+0.1
1,048,176	+		MPMX19_03616	0.71	-1.0
1,048,176	+		MPMX19_03616	0.71	+0.6
1,048,176	+		MPMX19_03616	0.71	-0.5
1,048,176	+		MPMX19_03616	0.71	-1.3
1,048,177	-		MPMX19_03616	0.71	-1.0
1,048,177	-		MPMX19_03616	0.71	-1.8
1,048,177	-		MPMX19_03616	0.71	-0.7
1,048,257	+		MPMX19_03616	0.74	+0.2
1,048,257	+		MPMX19_03616	0.74	-1.0
1,048,257	+		MPMX19_03616	0.74	+0.8
1,048,258	-		MPMX19_03616	0.74	-1.6
1,048,258	-		MPMX19_03616	0.74	+0.4
1,048,258	-		MPMX19_03616	0.74	+0.5
1,048,258	-		MPMX19_03616	0.74	-0.8
1,048,587	+		MPMX19_03616	0.87	-1.0
1,048,587	+		MPMX19_03616	0.87	-0.6
1,048,587	+		MPMX19_03616	0.87	+1.8
1,048,587	+		MPMX19_03616	0.87	-0.3
1,048,587	+		MPMX19_03616	0.87	-0.0
1,048,587	+		MPMX19_03616	0.87	+0.1
1,048,587	+		MPMX19_03616	0.87	-1.1
1,048,587	+		MPMX19_03616	0.87	-0.5
1,048,587	+		MPMX19_03616	0.87	+0.3
1,048,588	-		MPMX19_03616	0.87	-1.1
1,048,588	-		MPMX19_03616	0.87	-0.4
1,048,588	-		MPMX19_03616	0.87	-0.9
1,048,588	-		MPMX19_03616	0.87	+0.7
1,048,588	-		MPMX19_03616	0.87	+0.6
1,048,588	-		MPMX19_03616	0.87	-1.2
1,048,588	-		MPMX19_03616	0.87	+0.4
1,048,588	-		MPMX19_03616	0.87	-1.9
1,048,588	-		MPMX19_03616	0.87	-1.2
1,048,588	-		MPMX19_03616	0.87	-1.9
1,048,588	-		MPMX19_03616	0.87	-1.5
1,049,185	+		MPMX19_03617	0.26	-0.8
1,049,185	+		MPMX19_03617	0.26	+0.4
1,049,185	+		MPMX19_03617	0.26	-0.0
1,049,186	-		MPMX19_03617	0.26	-2.2
1,049,186	-		MPMX19_03617	0.26	-1.4
1,049,186	-		MPMX19_03617	0.26	+0.8
1,049,186	-		MPMX19_03617	0.26	+0.3
1,049,186	-		MPMX19_03617	0.26	+0.0
1,049,186	-		MPMX19_03617	0.26	+0.5
1,049,599	+		MPMX19_03617	0.85	-1.5
1,049,599	+		MPMX19_03617	0.85	-1.0
1,049,599	+		MPMX19_03617	0.85	-0.4
1,049,599	+		MPMX19_03617	0.85	-1.6
1,049,600	-		MPMX19_03617	0.85	+0.3
1,049,600	-		MPMX19_03617	0.85	+0.1
1,049,600	-		MPMX19_03617	0.85	-0.4
1,049,600	-		MPMX19_03617	0.85	-0.3
1,049,841	+				-1.8
1,049,863	-				-0.3
1,049,863	-				-0.1
1,049,863	-				-0.4
1,049,863	-				-0.3