Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02852

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
93,730	-		MPMX19_02850	0.83	-0.4
93,730	-		MPMX19_02850	0.83	-1.9
93,840	+				+0.5
93,840	+				-1.2
93,840	+				-1.3
93,840	+				+0.2
93,840	+				-0.2
93,840	+				-1.9
93,840	+				-1.2
93,841	-				-0.4
93,841	-				+0.2
93,841	-				-1.0
93,841	-				-1.1
93,906	+				-0.2
93,906	+				-0.5
93,906	+				+0.6
93,906	+				-0.1
93,906	+				-1.4
93,906	+				-2.3
93,907	-				-0.8
93,907	-				-1.4
93,907	-				-0.7
93,907	-				-1.1
94,024	+		MPMX19_02851	0.33	-0.4
94,024	+		MPMX19_02851	0.33	-0.4
94,024	+		MPMX19_02851	0.33	-0.5
94,025	-		MPMX19_02851	0.33	-0.5
94,025	-		MPMX19_02851	0.33	-0.6
94,025	-		MPMX19_02851	0.33	-0.6
94,025	-		MPMX19_02851	0.33	-1.4
94,025	-		MPMX19_02851	0.33	-0.2
94,025	-		MPMX19_02851	0.33	-0.7
94,271	+				-1.6
95,033	+		MPMX19_02852	0.70	-1.1
95,033	+		MPMX19_02852	0.70	-1.3
95,033	+		MPMX19_02852	0.70	-1.3
95,034	-		MPMX19_02852	0.70	-0.9
95,034	-		MPMX19_02852	0.70	+0.6
95,034	-		MPMX19_02852	0.70	-1.7
95,034	-		MPMX19_02852	0.70	-0.3
95,120	+		MPMX19_02852	0.78	-1.1
95,121	-		MPMX19_02852	0.78	-0.8
95,581	+				-0.1
95,581	+				-0.7
95,581	+				-1.4
95,581	+				+0.2
95,581	+				-0.2
95,581	+				+0.1
95,581	+				-0.4
95,581	+				-0.6
95,581	+				-0.8
95,581	+				-0.3
95,581	+				-0.8
95,581	+				-0.2
95,581	+				-0.4
95,581	+				+0.1
95,581	+				-0.4
95,582	-				+1.1
95,582	-				-0.9
95,582	-				-1.4
95,582	-				-2.6
95,582	-				-0.9
95,582	-				-1.2
95,582	-				+0.1
95,582	-				+0.3
95,582	-				+0.0
95,582	-				+0.1
95,582	-				+0.2
95,582	-				-1.8
95,807	+		MPMX19_02853	0.25	-0.5
95,807	+		MPMX19_02853	0.25	-0.2
95,808	-		MPMX19_02853	0.25	-1.2
95,808	-		MPMX19_02853	0.25	+0.7
95,810	-		MPMX19_02853	0.25	-0.9
95,810	-		MPMX19_02853	0.25	-1.2
95,810	-		MPMX19_02853	0.25	-1.2
95,810	-		MPMX19_02853	0.25	-2.2
95,810	-		MPMX19_02853	0.25	-0.5
95,896	+		MPMX19_02853	0.32	-1.2
95,896	+		MPMX19_02853	0.32	-0.9
95,896	+		MPMX19_02853	0.32	+1.5
95,896	+		MPMX19_02853	0.32	+0.6
95,896	+		MPMX19_02853	0.32	-0.4
95,896	+		MPMX19_02853	0.32	+0.6
95,897	-		MPMX19_02853	0.32	+0.8
95,897	-		MPMX19_02853	0.32	-0.7
95,897	-		MPMX19_02853	0.32	+0.3
95,897	-		MPMX19_02853	0.32	-0.1
96,007	+		MPMX19_02853	0.41	-1.1
96,008	-		MPMX19_02853	0.41	-0.4
96,076	+		MPMX19_02853	0.46	-0.8
96,076	+		MPMX19_02853	0.46	-2.8
96,077	-		MPMX19_02853	0.47	-2.2
96,077	-		MPMX19_02853	0.47	-0.3
96,077	-		MPMX19_02853	0.47	+0.1
96,077	-		MPMX19_02853	0.47	-1.0
96,077	-		MPMX19_02853	0.47	-0.4
96,077	-		MPMX19_02853	0.47	-0.2
96,087	+		MPMX19_02853	0.47	-0.6
96,087	+		MPMX19_02853	0.47	+0.5
96,087	+		MPMX19_02853	0.47	-0.1
96,088	-		MPMX19_02853	0.47	-0.9
96,088	-		MPMX19_02853	0.47	+1.2
96,088	-		MPMX19_02853	0.47	+0.2
96,088	-		MPMX19_02853	0.47	-1.8
96,088	-		MPMX19_02853	0.47	-0.2
96,184	+		MPMX19_02853	0.55	+0.6
96,185	-		MPMX19_02853	0.55	-0.4
96,185	-		MPMX19_02853	0.55	-1.8
96,185	-		MPMX19_02853	0.55	+0.5
96,185	-		MPMX19_02853	0.55	+2.6
96,185	-		MPMX19_02853	0.55	+0.6
96,346	+		MPMX19_02853	0.68	-0.9
96,346	+		MPMX19_02853	0.68	-1.4
96,346	+		MPMX19_02853	0.68	-0.8