Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02582

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,697,195	+				-0.2
2,697,195	+				-0.3
2,697,195	+				-0.9
2,697,195	+				+0.4
2,697,196	-				+0.2
2,697,196	-				-0.2
2,697,196	-				-0.1
2,697,196	-				+0.4
2,697,272	+		MPMX19_02581	0.20	-1.3
2,697,273	-		MPMX19_02581	0.20	-0.9
2,697,273	-		MPMX19_02581	0.20	-0.0
2,697,366	+		MPMX19_02581	0.34	-0.2
2,697,366	+		MPMX19_02581	0.34	-0.7
2,697,366	+		MPMX19_02581	0.34	+0.7
2,697,366	+		MPMX19_02581	0.34	+0.8
2,697,366	+		MPMX19_02581	0.34	-1.2
2,697,367	-		MPMX19_02581	0.34	+0.6
2,697,367	-		MPMX19_02581	0.34	+0.0
2,697,367	-		MPMX19_02581	0.34	+0.0
2,697,367	-		MPMX19_02581	0.34	+0.2
2,697,367	-		MPMX19_02581	0.34	+1.0
2,697,367	-		MPMX19_02581	0.34	-0.8
2,697,367	-		MPMX19_02581	0.34	+1.5
2,697,367	-		MPMX19_02581	0.34	-1.2
2,697,367	-		MPMX19_02581	0.34	-0.6
2,697,367	-		MPMX19_02581	0.34	-1.1
2,697,814	+				-1.2
2,697,814	+				-2.1
2,697,815	-				-2.5
2,697,815	-				-0.6
2,697,815	-				+0.2
2,697,847	+				+0.7
2,697,847	+				+0.2
2,697,847	+				+0.1
2,697,847	+				+1.4
2,697,847	+				+0.1
2,697,847	+				-1.2
2,697,847	+				-0.1
2,697,847	+				-1.2
2,697,847	+				-0.7
2,697,847	+				-0.1
2,697,847	+				-1.7
2,697,847	+				+0.0
2,697,847	+				-1.2
2,697,847	+				+1.5
2,697,847	+				-2.0
2,697,847	+				+0.4
2,697,847	+				-1.2
2,697,847	+				+0.8
2,697,847	+				+0.2
2,697,847	+				+0.7
2,697,847	+				-0.5
2,697,847	+				+1.0
2,697,847	+				-1.2
2,697,847	+				-0.2
2,697,847	+				-0.6
2,697,847	+				+0.1
2,697,847	+				+0.8
2,697,847	+				-0.8
2,697,847	+				-0.1
2,697,847	+				-0.8
2,697,847	+				-0.7
2,697,847	+				-0.8
2,697,847	+				-0.2
2,697,847	+				-0.9
2,697,848	-				-0.2
2,697,848	-				-1.1
2,697,848	-				-1.6
2,697,848	-				-1.9
2,697,848	-				-0.8
2,697,848	-				-0.6
2,697,848	-				-0.3
2,697,848	-				+0.7
2,697,848	-				-0.5
2,697,848	-				+0.2
2,697,848	-				+0.5
2,697,848	-				+1.5
2,697,848	-				+1.8
2,697,848	-				-0.8
2,697,848	-				-0.2
2,697,848	-				-1.0
2,697,848	-				+0.4
2,697,848	-				-0.2
2,697,848	-				-0.1
2,697,848	-				-0.2
2,697,848	-				-0.8
2,697,848	-				-1.3
2,697,848	-				+0.0
2,697,848	-				+0.0
2,697,848	-				-0.9
2,697,848	-				-0.6
2,697,848	-				-0.1
2,697,848	-				-0.5
2,697,848	-				-0.8
2,697,848	-				-0.1
2,697,848	-				-0.2
2,697,848	-				-0.2
2,697,848	-				-0.0
2,697,848	-				-0.3
2,697,848	-				-1.6
2,697,848	-				+1.1
2,697,848	-				+0.4
2,697,848	-				-0.9
2,697,997	+				+1.5
2,697,997	+				-0.2
2,697,997	+				+0.7
2,697,997	+				-1.5
2,697,997	+				-1.9
2,697,997	+				-1.2
2,697,997	+				+1.8
2,697,997	+				-0.0
2,697,997	+				+0.4
2,697,997	+				-2.2
2,697,997	+				+1.1
2,697,997	+				-0.2
2,697,998	-				-0.0
2,697,998	-				-0.4
2,697,998	-				+0.4
2,697,998	-				+0.8
2,697,998	-				+0.1
2,697,998	-				-0.6
2,697,998	-				-0.7
2,697,998	-				-0.0
2,697,998	-				-0.1
2,697,998	-				+0.5
2,697,998	-				+0.0
2,698,078	+		MPMX19_02582	0.10	+0.0
2,698,078	+		MPMX19_02582	0.10	+1.8
2,698,078	+		MPMX19_02582	0.10	-0.8
2,698,079	-		MPMX19_02582	0.11	+0.4
2,698,079	-		MPMX19_02582	0.11	-0.3
2,698,079	-		MPMX19_02582	0.11	+0.0
2,698,079	-		MPMX19_02582	0.11	-0.7
2,698,108	+		MPMX19_02582	0.12	+1.2
2,698,108	+		MPMX19_02582	0.12	-0.5
2,698,108	+		MPMX19_02582	0.12	-1.2
2,698,108	+		MPMX19_02582	0.12	-0.3
2,698,108	+		MPMX19_02582	0.12	+0.4
2,698,108	+		MPMX19_02582	0.12	-0.2
2,698,108	+		MPMX19_02582	0.12	-0.7
2,698,108	+		MPMX19_02582	0.12	+0.8
2,698,108	+		MPMX19_02582	0.12	-0.0
2,698,108	+		MPMX19_02582	0.12	-1.3
2,698,108	+		MPMX19_02582	0.12	+0.0
2,698,108	+		MPMX19_02582	0.12	+0.4
2,698,109	-		MPMX19_02582	0.12	+0.1
2,698,109	-		MPMX19_02582	0.12	+0.1
2,698,109	-		MPMX19_02582	0.12	-0.3
2,698,109	-		MPMX19_02582	0.12	+0.0
2,698,109	-		MPMX19_02582	0.12	+1.0
2,698,109	-		MPMX19_02582	0.12	+0.1
2,698,109	-		MPMX19_02582	0.12	-0.2
2,698,109	-		MPMX19_02582	0.12	-0.4
2,698,109	-		MPMX19_02582	0.12	-0.2
2,698,109	-		MPMX19_02582	0.12	-0.6
2,698,109	-		MPMX19_02582	0.12	+0.6
2,698,109	-		MPMX19_02582	0.12	-1.0
2,698,109	-		MPMX19_02582	0.12	-0.0
2,699,041	+		MPMX19_02582	0.69	-0.3
2,699,041	+		MPMX19_02582	0.69	+0.2
2,699,041	+		MPMX19_02582	0.69	-1.3
2,699,041	+		MPMX19_02582	0.69	+0.9
2,699,041	+		MPMX19_02582	0.69	-1.3
2,699,042	-		MPMX19_02582	0.69	+2.5
2,699,042	-		MPMX19_02582	0.69	+0.1
2,699,042	-		MPMX19_02582	0.69	-0.5
2,699,042	-		MPMX19_02582	0.69	-0.0
2,699,042	-		MPMX19_02582	0.69	+1.0
2,699,042	-		MPMX19_02582	0.69	+0.8
2,699,245	+		MPMX19_02582	0.82	+0.1
2,699,245	+		MPMX19_02582	0.82	-1.8
2,699,245	+		MPMX19_02582	0.82	+0.2
2,699,383	+				+0.8
2,699,383	+				-0.3
2,699,383	+				-0.2
2,699,383	+				-0.2
2,699,383	+				+0.0
2,699,384	-				-0.2
2,699,384	-				-1.3
2,699,384	-				-0.8
2,699,499	+				+0.1
2,699,500	-				+0.6
2,699,500	-				-0.2
2,699,500	-				+0.9
2,699,527	+				-1.9
2,699,527	+				-1.0
2,699,527	+				+0.0
2,699,527	+				-1.2
2,699,615	+				+0.2
2,699,615	+				+0.2
2,699,615	+				-1.2
2,699,615	+				-1.0
2,699,615	+				-0.5
2,699,615	+				+0.1
2,699,615	+				-0.2
2,699,615	+				+2.1
2,699,615	+				-0.5
2,699,615	+				+0.2
2,699,615	+				-2.4
2,699,615	+				+1.1
2,699,615	+				-1.0
2,699,615	+				+0.8
2,699,615	+				+0.6
2,699,615	+				+0.1
2,699,615	+				-0.4
2,699,615	+				+0.5
2,699,615	+				+0.8
2,699,615	+				-0.0
2,699,615	+				+1.3
2,699,615	+				-0.1
2,699,615	+				-0.8
2,699,615	+				-1.3
2,699,615	+				+0.4
2,699,615	+				+1.1
2,699,615	+				-0.4
2,699,615	+				+1.8
2,699,615	+				+0.6
2,699,615	+				+0.2
2,699,615	+				-1.6
2,699,615	+				+0.1
2,699,615	+				+0.2
2,699,615	+				-0.0
2,699,615	+				+1.8
2,699,615	+				+0.2
2,699,616	-				+0.7
2,699,616	-				+0.0
2,699,616	-				-0.9
2,699,616	-				-0.2
2,699,616	-				-0.8
2,699,616	-				-0.5
2,699,616	-				+0.3
2,699,616	-				-1.2
2,699,616	-				-0.0
2,699,616	-				-1.6
2,699,616	-				-0.6
2,699,616	-				-0.7
2,699,616	-				-1.0
2,699,616	-				-0.2
2,699,616	-				+0.3
2,699,616	-				-1.5
2,699,616	-				-2.3
2,699,616	-				-0.1
2,699,616	-				-0.0
2,699,616	-				-0.2
2,699,616	-				+0.6
2,699,616	-				-0.6
2,699,616	-				-0.9
2,700,021	+		MPMX19_02583	0.33	-0.9
2,700,021	+		MPMX19_02583	0.33	-0.1
2,700,022	-		MPMX19_02583	0.33	-0.5
2,700,022	-		MPMX19_02583	0.33	-0.4
2,700,022	-		MPMX19_02583	0.33	-0.6
2,700,022	-		MPMX19_02583	0.33	+0.7
2,700,022	-		MPMX19_02583	0.33	+0.2
2,700,022	-		MPMX19_02583	0.33	+0.2
2,700,022	-		MPMX19_02583	0.33	-0.3
2,700,139	+		MPMX19_02583	0.45	-0.5
2,700,141	+		MPMX19_02583	0.45	-0.1
2,700,141	+		MPMX19_02583	0.45	+0.5
2,700,141	+		MPMX19_02583	0.45	-1.4
2,700,141	+		MPMX19_02583	0.45	+1.1
2,700,141	+		MPMX19_02583	0.45	-1.3
2,700,141	+		MPMX19_02583	0.45	-0.5
2,700,141	+		MPMX19_02583	0.45	+0.7
2,700,141	+		MPMX19_02583	0.45	-0.5
2,700,141	+		MPMX19_02583	0.45	+0.5
2,700,141	+		MPMX19_02583	0.45	+0.3
2,700,141	+		MPMX19_02583	0.45	-0.1
2,700,141	+		MPMX19_02583	0.45	-0.4
2,700,141	+		MPMX19_02583	0.45	+0.0
2,700,141	+		MPMX19_02583	0.45	+0.4
2,700,142	-		MPMX19_02583	0.45	-0.3
2,700,142	-		MPMX19_02583	0.45	+1.5
2,700,142	-		MPMX19_02583	0.45	-2.0
2,700,142	-		MPMX19_02583	0.45	+0.8
2,700,142	-		MPMX19_02583	0.45	-1.9
2,700,142	-		MPMX19_02583	0.45	+0.2
2,700,142	-		MPMX19_02583	0.45	-0.2
2,700,142	-		MPMX19_02583	0.45	+0.2
2,700,142	-		MPMX19_02583	0.45	-1.3
2,700,345	+		MPMX19_02583	0.64	+0.7
2,700,345	+		MPMX19_02583	0.64	+1.8
2,700,345	+		MPMX19_02583	0.64	-1.2
2,700,345	+		MPMX19_02583	0.64	+0.1
2,700,345	+		MPMX19_02583	0.64	-1.3
2,700,345	+		MPMX19_02583	0.64	-0.2
2,700,345	+		MPMX19_02583	0.64	+0.6
2,700,345	+		MPMX19_02583	0.64	-1.0
2,700,345	+		MPMX19_02583	0.64	+0.6
2,700,345	+		MPMX19_02583	0.64	-1.5
2,700,345	+		MPMX19_02583	0.64	-1.3
2,700,345	+		MPMX19_02583	0.64	-0.4
2,700,345	+		MPMX19_02583	0.64	-0.9
2,700,345	+		MPMX19_02583	0.64	+0.5
2,700,346	-		MPMX19_02583	0.64	+0.5
2,700,346	-		MPMX19_02583	0.64	-1.4
2,700,346	-		MPMX19_02583	0.64	-0.8
2,700,346	-		MPMX19_02583	0.64	-0.3
2,700,423	+		MPMX19_02583	0.72	-1.3
2,700,423	+		MPMX19_02583	0.72	-1.3
2,700,424	-		MPMX19_02583	0.72	+1.3
2,700,424	-		MPMX19_02583	0.72	+0.1
2,700,424	-		MPMX19_02583	0.72	-1.8
2,700,424	-		MPMX19_02583	0.72	-0.2
2,700,429	+		MPMX19_02583	0.72	-0.2
2,700,429	+		MPMX19_02583	0.72	+2.1
2,700,429	+		MPMX19_02583	0.72	+0.3
2,700,429	+		MPMX19_02583	0.72	-0.2
2,700,429	+		MPMX19_02583	0.72	-1.2
2,700,429	+		MPMX19_02583	0.72	-0.5
2,700,429	+		MPMX19_02583	0.72	+0.8
2,700,429	+		MPMX19_02583	0.72	-2.6
2,700,429	+		MPMX19_02583	0.72	-0.5
2,700,429	+		MPMX19_02583	0.72	-0.3
2,700,429	+		MPMX19_02583	0.72	+1.8
2,700,429	+		MPMX19_02583	0.72	-1.5
2,700,429	+		MPMX19_02583	0.72	+0.8
2,700,429	+		MPMX19_02583	0.72	-1.3
2,700,429	+		MPMX19_02583	0.72	-1.1
2,700,429	+		MPMX19_02583	0.72	+0.6
2,700,429	+		MPMX19_02583	0.72	+1.4
2,700,429	+		MPMX19_02583	0.72	+0.4
2,700,429	+		MPMX19_02583	0.72	+0.2
2,700,430	-		MPMX19_02583	0.72	+1.6
2,700,430	-		MPMX19_02583	0.72	-1.5
2,700,430	-		MPMX19_02583	0.72	+0.4
2,700,430	-		MPMX19_02583	0.72	+0.6
2,700,430	-		MPMX19_02583	0.72	+0.5
2,700,430	-		MPMX19_02583	0.72	-1.6
2,700,430	-		MPMX19_02583	0.72	+1.1
2,700,430	-		MPMX19_02583	0.72	-0.4
2,700,430	-		MPMX19_02583	0.72	-0.4
2,700,430	-		MPMX19_02583	0.72	-0.4
2,700,430	-		MPMX19_02583	0.72	+0.8
2,700,430	-		MPMX19_02583	0.72	-1.0
2,700,430	-		MPMX19_02583	0.72	-0.8
2,700,430	-		MPMX19_02583	0.72	-2.1
2,700,430	-		MPMX19_02583	0.72	+0.0
2,700,430	-		MPMX19_02583	0.72	+0.2
2,700,430	-		MPMX19_02583	0.72	+0.7
2,700,430	-		MPMX19_02583	0.72	-1.2
2,700,430	-		MPMX19_02583	0.72	+0.7
2,700,513	+		MPMX19_02583	0.80	+3.1
2,700,513	+		MPMX19_02583	0.80	-0.5
2,700,513	+		MPMX19_02583	0.80	-0.3
2,700,513	+		MPMX19_02583	0.80	+0.2
2,700,513	+		MPMX19_02583	0.80	-0.9
2,700,513	+		MPMX19_02583	0.80	-0.2
2,700,513	+		MPMX19_02583	0.80	-0.5
2,700,513	+		MPMX19_02583	0.80	+0.3
2,700,513	+		MPMX19_02583	0.80	-0.2
2,700,513	+		MPMX19_02583	0.80	+0.1
2,700,514	-		MPMX19_02583	0.80	+0.1
2,700,514	-		MPMX19_02583	0.80	+0.2
2,700,514	-		MPMX19_02583	0.80	-0.4
2,700,514	-		MPMX19_02583	0.80	-0.8
2,700,514	-		MPMX19_02583	0.80	-1.0
2,700,514	-		MPMX19_02583	0.80	-0.6
2,700,514	-		MPMX19_02583	0.80	-0.3
2,700,514	-		MPMX19_02583	0.80	-0.6
2,700,514	-		MPMX19_02583	0.80	-0.8
2,700,534	+		MPMX19_02583	0.82	-1.2
2,700,534	+		MPMX19_02583	0.82	+0.0
2,700,534	+		MPMX19_02583	0.82	-0.7
2,700,534	+		MPMX19_02583	0.82	-1.2
2,700,534	+		MPMX19_02583	0.82	+1.0
2,700,534	+		MPMX19_02583	0.82	-0.6
2,700,534	+		MPMX19_02583	0.82	-0.6
2,700,534	+		MPMX19_02583	0.82	+0.1
2,700,534	+		MPMX19_02583	0.82	-0.5
2,700,534	+		MPMX19_02583	0.82	-0.5
2,700,534	+		MPMX19_02583	0.82	-1.2
2,700,534	+		MPMX19_02583	0.82	+0.6
2,700,534	+		MPMX19_02583	0.82	-2.2
2,700,534	+		MPMX19_02583	0.82	-2.1
2,700,534	+		MPMX19_02583	0.82	-1.2
2,700,534	+		MPMX19_02583	0.82	+0.0
2,700,534	+		MPMX19_02583	0.82	+0.5
2,700,534	+		MPMX19_02583	0.82	-0.8
2,700,535	-		MPMX19_02583	0.82	+0.5
2,700,535	-		MPMX19_02583	0.82	-0.6
2,700,535	-		MPMX19_02583	0.82	+2.4
2,700,535	-		MPMX19_02583	0.82	-0.5
2,700,535	-		MPMX19_02583	0.82	+0.2
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