Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02405

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,526,136	+		MPMX19_02403	0.82	-1.3
2,526,136	+		MPMX19_02403	0.82	-0.2
2,526,136	+		MPMX19_02403	0.82	+0.8
2,526,136	+		MPMX19_02403	0.82	+0.5
2,526,136	+		MPMX19_02403	0.82	-1.3
2,526,137	-		MPMX19_02403	0.82	-2.0
2,526,137	-		MPMX19_02403	0.82	-0.2
2,526,137	-		MPMX19_02403	0.82	+0.0
2,526,137	-		MPMX19_02403	0.82	+0.6
2,526,137	-		MPMX19_02403	0.82	+0.2
2,526,137	-		MPMX19_02403	0.82	-0.8
2,526,137	-		MPMX19_02403	0.82	-0.3
2,526,137	-		MPMX19_02403	0.82	+0.8
2,526,288	+				-1.1
2,526,288	+				+0.0
2,526,288	+				-0.4
2,526,288	+				-1.3
2,526,288	+				-0.7
2,526,288	+				-0.4
2,526,288	+				-1.2
2,526,383	+				-0.8
2,526,383	+				-1.0
2,526,383	+				-1.1
2,526,383	+				+0.6
2,526,383	+				-1.5
2,526,383	+				-1.4
2,526,383	+				-0.5
2,526,383	+				-0.5
2,526,383	+				+0.0
2,526,384	-				-0.1
2,526,384	-				-2.6
2,526,384	-				+0.2
2,526,384	-				+0.6
2,526,384	-				+0.0
2,526,384	-				-0.6
2,526,384	-				+0.4
2,526,384	-				-0.2
2,526,384	-				+1.5
2,526,384	-				-0.2
2,526,384	-				-0.7
2,526,384	-				-0.2
2,526,384	-				-0.7
2,526,384	-				-0.8
2,526,384	-				-0.9
2,526,384	-				-0.2
2,526,642	+		MPMX19_02404	0.43	-0.8
2,526,643	-		MPMX19_02404	0.43	-0.2
2,526,667	-		MPMX19_02404	0.47	-1.0
2,526,744	+		MPMX19_02404	0.59	-0.6
2,526,744	+		MPMX19_02404	0.59	+0.2
2,526,744	+		MPMX19_02404	0.59	-0.6
2,526,744	+		MPMX19_02404	0.59	-1.4
2,526,744	+		MPMX19_02404	0.59	+0.1
2,526,745	-		MPMX19_02404	0.59	+0.6
2,526,745	-		MPMX19_02404	0.59	+0.1
2,526,745	-		MPMX19_02404	0.59	-0.2
2,526,745	-		MPMX19_02404	0.59	-0.7
2,526,745	-		MPMX19_02404	0.59	+0.4
2,526,745	-		MPMX19_02404	0.59	+0.4
2,526,783	+		MPMX19_02404	0.65	-1.6
2,527,059	+				-0.7
2,527,060	-				-0.2
2,527,060	-				+0.2
2,527,251	+		MPMX19_02405	0.53	-1.9
2,527,251	+		MPMX19_02405	0.53	-1.8
2,527,251	+		MPMX19_02405	0.53	+0.6
2,527,252	-		MPMX19_02405	0.54	-1.1
2,527,252	-		MPMX19_02405	0.54	-0.8
2,527,252	-		MPMX19_02405	0.54	-1.3
2,527,252	-		MPMX19_02405	0.54	+1.2
2,527,252	-		MPMX19_02405	0.54	-2.0
2,527,252	-		MPMX19_02405	0.54	-0.2
2,527,252	-		MPMX19_02405	0.54	-0.9
2,527,429	+				+1.4
2,527,429	+				+1.6
2,527,429	+				-0.6
2,527,429	+				+0.8
2,527,429	+				+0.1
2,527,429	+				+0.1
2,527,429	+				+0.2
2,527,429	+				+0.8
2,527,429	+				-0.6
2,527,457	+				+0.4
2,527,457	+				-0.8
2,527,458	-				+0.8
2,527,458	-				-0.1
2,527,458	-				-0.8
2,527,471	+				-0.4
2,527,473	+				-0.8
2,527,473	+				-0.5
2,527,473	+				-1.4
2,527,473	+				-0.4
2,527,473	+				-1.5
2,527,473	+				-1.0
2,527,490	+				-2.4
2,527,490	+				-0.8
2,527,490	+				-0.2
2,527,491	-				-0.0
2,527,491	-				-1.0
2,527,491	-				-2.0
2,527,499	+				-0.4
2,527,499	+				-0.2
2,527,499	+				+0.7
2,527,499	+				-1.4
2,527,500	-				-0.2
2,527,500	-				-0.3
2,527,746	+		MPMX19_02406	0.32	-0.1
2,527,747	-		MPMX19_02406	0.32	+0.1
2,527,747	-		MPMX19_02406	0.32	-1.0
2,527,862	+		MPMX19_02406	0.45	-0.1
2,527,863	-		MPMX19_02406	0.45	+0.5
2,527,924	+		MPMX19_02406	0.53	+0.2
2,527,924	+		MPMX19_02406	0.53	+0.8
2,527,924	+		MPMX19_02406	0.53	-1.8
2,527,924	+		MPMX19_02406	0.53	+0.2
2,527,924	+		MPMX19_02406	0.53	+0.2
2,527,925	-		MPMX19_02406	0.53	-0.5
2,527,925	-		MPMX19_02406	0.53	-0.0
2,527,925	-		MPMX19_02406	0.53	-1.3
2,527,925	-		MPMX19_02406	0.53	+0.6
2,527,925	-		MPMX19_02406	0.53	-0.2
2,527,925	-		MPMX19_02406	0.53	-0.2
2,527,967	+		MPMX19_02406	0.58	-0.1
2,527,967	+		MPMX19_02406	0.58	-1.6
2,527,967	+		MPMX19_02406	0.58	-1.4
2,527,967	+		MPMX19_02406	0.58	+0.0
2,527,968	-		MPMX19_02406	0.58	+1.2
2,527,968	-		MPMX19_02406	0.58	+0.2
2,527,968	-		MPMX19_02406	0.58	-1.8
2,527,968	-		MPMX19_02406	0.58	+0.4
2,528,027	+		MPMX19_02406	0.65	+0.6
2,528,027	+		MPMX19_02406	0.65	+0.7
2,528,027	+		MPMX19_02406	0.65	-0.2
2,528,027	+		MPMX19_02406	0.65	+1.3
2,528,027	+		MPMX19_02406	0.65	-0.7
2,528,027	+		MPMX19_02406	0.65	-0.1
2,528,027	+		MPMX19_02406	0.65	-1.1
2,528,027	+		MPMX19_02406	0.65	+0.3
2,528,028	-		MPMX19_02406	0.65	+0.1
2,528,028	-		MPMX19_02406	0.65	+0.0
2,528,045	+		MPMX19_02406	0.67	-1.5
2,528,045	+		MPMX19_02406	0.67	+0.9
2,528,045	+		MPMX19_02406	0.67	-0.4
2,528,045	+		MPMX19_02406	0.67	+0.1
2,528,045	+		MPMX19_02406	0.67	-0.5
2,528,045	+		MPMX19_02406	0.67	-0.8
2,528,045	+		MPMX19_02406	0.67	+0.2
2,528,045	+		MPMX19_02406	0.67	-0.5
2,528,045	+		MPMX19_02406	0.67	-1.1
2,528,045	+		MPMX19_02406	0.67	+0.0
2,528,045	+		MPMX19_02406	0.67	-1.2
2,528,045	+		MPMX19_02406	0.67	-1.2
2,528,045	+		MPMX19_02406	0.67	-0.8
2,528,045	+		MPMX19_02406	0.67	-0.7
2,528,045	+		MPMX19_02406	0.67	-0.1
2,528,046	-		MPMX19_02406	0.67	-1.2
2,528,046	-		MPMX19_02406	0.67	-0.5
2,528,046	-		MPMX19_02406	0.67	+0.3
2,528,046	-		MPMX19_02406	0.67	-1.5
2,528,046	-		MPMX19_02406	0.67	-0.2
2,528,046	-		MPMX19_02406	0.67	-0.5
2,528,046	-		MPMX19_02406	0.67	+0.0
2,528,046	-		MPMX19_02406	0.67	+0.2
2,528,046	-		MPMX19_02406	0.67	+1.1
2,528,046	-		MPMX19_02406	0.67	-0.8
2,528,046	-		MPMX19_02406	0.67	+1.8
2,528,046	-		MPMX19_02406	0.67	-0.7
2,528,046	-		MPMX19_02406	0.67	-0.7
2,528,046	-		MPMX19_02406	0.67	+0.5
2,528,046	-		MPMX19_02406	0.67	-0.7
2,528,046	-		MPMX19_02406	0.67	-1.8
2,528,046	-		MPMX19_02406	0.67	-0.7
2,528,046	-		MPMX19_02406	0.67	+0.0
2,528,046	-		MPMX19_02406	0.67	-0.8
2,528,046	-		MPMX19_02406	0.67	-0.1
2,528,046	-		MPMX19_02406	0.67	+0.5
2,528,046	-		MPMX19_02406	0.67	-0.8
2,528,046	-		MPMX19_02406	0.67	-1.5
2,528,342	+				-0.4
2,528,342	+				-0.5
2,528,342	+				+0.3
2,528,342	+				-0.5
2,528,342	+				-0.8
2,528,343	-				+0.4
2,528,343	-				-0.5
2,528,343	-				-0.2
2,528,356	-				-1.7
2,528,356	-				-0.5