Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02307

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,428,008	+		MPMX19_02305	0.75	-1.2
2,428,008	+		MPMX19_02305	0.75	-0.3
2,428,008	+		MPMX19_02305	0.75	-1.4
2,428,008	+		MPMX19_02305	0.75	+0.1
2,428,009	-		MPMX19_02305	0.75	-0.6
2,428,009	-		MPMX19_02305	0.75	-1.5
2,428,009	-		MPMX19_02305	0.75	-0.1
2,428,009	-		MPMX19_02305	0.75	+0.1
2,428,009	-		MPMX19_02305	0.75	-0.4
2,428,110	+				-2.7
2,428,110	+				-0.2
2,428,110	+				-0.6
2,428,110	+				-0.1
2,428,110	+				-0.4
2,428,110	+				-0.1
2,428,110	+				+0.1
2,428,110	+				-1.1
2,428,110	+				+1.1
2,428,110	+				-0.1
2,428,110	+				-0.6
2,428,110	+				-0.5
2,428,110	+				-2.5
2,428,110	+				-0.9
2,428,110	+				+0.8
2,428,110	+				-1.2
2,428,110	+				+0.7
2,428,110	+				-0.7
2,428,110	+				-1.4
2,428,110	+				-1.1
2,428,110	+				+1.6
2,428,110	+				-0.4
2,428,110	+				-1.4
2,428,110	+				+1.6
2,428,110	+				+1.1
2,428,110	+				-0.9
2,428,110	+				-1.8
2,428,110	+				-0.7
2,428,110	+				-0.5
2,428,110	+				-1.2
2,428,110	+				-1.7
2,428,110	+				-1.4
2,428,111	-				+1.0
2,428,111	-				+1.6
2,428,111	-				+0.2
2,428,111	-				-0.2
2,428,111	-				-0.8
2,428,111	-				-0.7
2,428,111	-				-1.9
2,428,111	-				-2.0
2,428,111	-				+0.4
2,428,111	-				-0.0
2,428,111	-				-0.7
2,428,111	-				+0.3
2,428,111	-				-0.3
2,428,111	-				-0.5
2,428,111	-				+0.0
2,428,111	-				-0.5
2,428,111	-				+0.6
2,428,111	-				+0.4
2,428,111	-				-0.2
2,428,111	-				+0.2
2,428,111	-				-1.2
2,428,111	-				-0.1
2,428,111	-				-0.8
2,428,111	-				-0.1
2,428,111	-				-0.9
2,428,111	-				+0.7
2,428,111	-				-0.3
2,428,111	-				-1.0
2,428,111	-				-0.5
2,428,170	+				+0.5
2,428,170	+				-0.1
2,428,170	+				-0.8
2,428,171	-				-0.2
2,428,171	-				-0.2
2,428,171	-				-0.4
2,428,171	-				-0.0
2,428,188	+				-0.0
2,428,188	+				-0.3
2,428,188	+				-1.8
2,428,188	+				-1.1
2,428,188	+				+1.1
2,428,188	+				-0.7
2,428,189	-				-2.0
2,428,204	+				+0.5
2,428,205	-				-0.9
2,428,205	-				-1.4
2,428,205	-				-0.1
2,428,205	-				-2.5
2,428,246	+				-1.9
2,428,246	+				+0.2
2,428,247	-				+0.1
2,428,247	-				-1.1
2,428,247	-				+1.2
2,428,305	+				-0.6
2,428,305	+				-0.6
2,428,305	+				-0.7
2,428,305	+				+0.3
2,428,306	-				-0.2
2,428,306	-				+0.0
2,428,344	+		MPMX19_02306	0.15	+0.1
2,428,344	+		MPMX19_02306	0.15	-0.8
2,428,344	+		MPMX19_02306	0.15	-0.4
2,428,345	-		MPMX19_02306	0.15	-1.6
2,428,345	-		MPMX19_02306	0.15	+1.0
2,428,345	-		MPMX19_02306	0.15	-0.2
2,428,345	-		MPMX19_02306	0.15	-0.8
2,428,345	-		MPMX19_02306	0.15	-2.5
2,428,345	-		MPMX19_02306	0.15	-0.4
2,428,345	-		MPMX19_02306	0.15	-0.6
2,428,345	-		MPMX19_02306	0.15	-0.2
2,428,345	-		MPMX19_02306	0.15	-1.2
2,428,368	+		MPMX19_02306	0.18	-0.4
2,428,369	-		MPMX19_02306	0.19	-0.9
2,428,509	+		MPMX19_02306	0.41	-0.1
2,428,509	+		MPMX19_02306	0.41	+0.2
2,428,509	+		MPMX19_02306	0.41	-1.7
2,428,510	-		MPMX19_02306	0.41	-0.3
2,428,510	-		MPMX19_02306	0.41	+0.9
2,428,510	-		MPMX19_02306	0.41	+0.8
2,428,510	-		MPMX19_02306	0.41	-0.6
2,428,510	-		MPMX19_02306	0.41	+0.3
2,428,602	+		MPMX19_02306	0.55	+0.3
2,428,602	+		MPMX19_02306	0.55	-0.9
2,428,602	+		MPMX19_02306	0.55	-0.8
2,428,602	+		MPMX19_02306	0.55	-1.0
2,428,602	+		MPMX19_02306	0.55	+1.1
2,428,602	+		MPMX19_02306	0.55	-1.1
2,428,602	+		MPMX19_02306	0.55	-0.4
2,428,602	+		MPMX19_02306	0.55	+0.2
2,428,602	+		MPMX19_02306	0.55	-0.5
2,428,602	+		MPMX19_02306	0.55	-1.2
2,428,602	+		MPMX19_02306	0.55	-1.2
2,428,602	+		MPMX19_02306	0.55	-0.2
2,428,602	+		MPMX19_02306	0.55	-0.9
2,428,602	+		MPMX19_02306	0.55	+0.3
2,428,602	+		MPMX19_02306	0.55	-1.1
2,428,602	+		MPMX19_02306	0.55	-0.1
2,428,602	+		MPMX19_02306	0.55	-1.1
2,428,602	+		MPMX19_02306	0.55	+0.2
2,428,602	+		MPMX19_02306	0.55	-1.7
2,428,602	+		MPMX19_02306	0.55	-2.0
2,428,602	+		MPMX19_02306	0.55	-0.0
2,428,602	+		MPMX19_02306	0.55	+0.5
2,428,602	+		MPMX19_02306	0.55	+1.6
2,428,602	+		MPMX19_02306	0.55	-0.3
2,428,602	+		MPMX19_02306	0.55	-0.7
2,428,602	+		MPMX19_02306	0.55	-0.8
2,428,602	+		MPMX19_02306	0.55	-0.3
2,428,602	+		MPMX19_02306	0.55	+0.1
2,428,602	+		MPMX19_02306	0.55	+0.3
2,428,602	+		MPMX19_02306	0.55	-1.1
2,428,602	+		MPMX19_02306	0.55	-0.5
2,428,603	+		MPMX19_02306	0.56	-0.5
2,428,603	-		MPMX19_02306	0.56	-0.1
2,428,603	-		MPMX19_02306	0.56	+1.6
2,428,603	-		MPMX19_02306	0.56	+1.2
2,428,603	-		MPMX19_02306	0.56	+0.4
2,428,603	-		MPMX19_02306	0.56	-0.5
2,428,603	-		MPMX19_02306	0.56	+0.5
2,428,603	-		MPMX19_02306	0.56	+0.9
2,428,603	-		MPMX19_02306	0.56	-0.7
2,428,603	-		MPMX19_02306	0.56	-0.4
2,428,603	-		MPMX19_02306	0.56	+0.5
2,428,603	-		MPMX19_02306	0.56	-0.1
2,428,603	-		MPMX19_02306	0.56	-0.5
2,428,603	-		MPMX19_02306	0.56	-0.1
2,428,603	-		MPMX19_02306	0.56	-1.3
2,428,603	-		MPMX19_02306	0.56	-0.2
2,428,603	-		MPMX19_02306	0.56	-0.3
2,428,603	-		MPMX19_02306	0.56	-1.4
2,428,603	-		MPMX19_02306	0.56	+0.7
2,428,603	-		MPMX19_02306	0.56	+0.2
2,428,603	-		MPMX19_02306	0.56	+0.2
2,428,603	-		MPMX19_02306	0.56	-0.7
2,428,603	-		MPMX19_02306	0.56	-0.9
2,428,603	-		MPMX19_02306	0.56	+0.9
2,428,603	-		MPMX19_02306	0.56	-2.4
2,428,603	-		MPMX19_02306	0.56	+0.4
2,428,603	-		MPMX19_02306	0.56	-0.8
2,428,603	-		MPMX19_02306	0.56	-0.1
2,428,603	-		MPMX19_02306	0.56	-0.7
2,428,603	-		MPMX19_02306	0.56	-0.1
2,428,603	-		MPMX19_02306	0.56	+0.2
2,428,603	-		MPMX19_02306	0.56	+1.0
2,428,603	-		MPMX19_02306	0.56	-0.6
2,428,603	-		MPMX19_02306	0.56	-0.6
2,428,603	-		MPMX19_02306	0.56	+0.1
2,428,671	+		MPMX19_02306	0.66	-0.2
2,428,671	+		MPMX19_02306	0.66	+0.7
2,428,671	+		MPMX19_02306	0.66	-0.2
2,428,671	+		MPMX19_02306	0.66	-1.7
2,428,671	+		MPMX19_02306	0.66	+0.9
2,428,671	+		MPMX19_02306	0.66	+0.1
2,428,671	+		MPMX19_02306	0.66	+1.3
2,428,672	-		MPMX19_02306	0.67	+0.0
2,428,672	-		MPMX19_02306	0.67	-0.7
2,428,672	-		MPMX19_02306	0.67	-0.5
2,428,672	-		MPMX19_02306	0.67	-0.4
2,428,672	-		MPMX19_02306	0.67	-3.2
2,428,672	-		MPMX19_02306	0.67	+0.2
2,428,672	-		MPMX19_02306	0.67	-1.4
2,428,727	+		MPMX19_02306	0.75	-1.1
2,428,727	+		MPMX19_02306	0.75	+0.3
2,428,727	+		MPMX19_02306	0.75	-1.8
2,428,727	+		MPMX19_02306	0.75	+0.1
2,428,727	+		MPMX19_02306	0.75	+0.5
2,428,727	+		MPMX19_02306	0.75	-0.5
2,428,727	+		MPMX19_02306	0.75	-2.3
2,428,727	+		MPMX19_02306	0.75	-0.5
2,428,728	-		MPMX19_02306	0.75	+0.4
2,428,728	-		MPMX19_02306	0.75	+1.0
2,428,728	-		MPMX19_02306	0.75	-1.7
2,428,728	-		MPMX19_02306	0.75	-0.8
2,428,728	-		MPMX19_02306	0.75	-0.8
2,428,728	-		MPMX19_02306	0.75	+0.8
2,428,746	+		MPMX19_02306	0.78	-1.4
2,428,747	-		MPMX19_02306	0.78	-0.1
2,428,747	-		MPMX19_02306	0.78	-0.2
2,428,747	-		MPMX19_02306	0.78	-0.3
2,428,747	-		MPMX19_02306	0.78	+1.3
2,428,747	-		MPMX19_02306	0.78	-0.1
2,428,803	+		MPMX19_02306	0.87	-0.8
2,428,803	+		MPMX19_02306	0.87	-1.0
2,428,803	+		MPMX19_02306	0.87	-0.3
2,428,803	+		MPMX19_02306	0.87	+0.1
2,428,803	+		MPMX19_02306	0.87	+0.8
2,428,803	+		MPMX19_02306	0.87	-0.4
2,428,803	+		MPMX19_02306	0.87	-1.6
2,428,803	+		MPMX19_02306	0.87	+0.2
2,428,803	+		MPMX19_02306	0.87	-1.7
2,428,803	+		MPMX19_02306	0.87	-0.3
2,428,803	+		MPMX19_02306	0.87	-0.3
2,428,803	+		MPMX19_02306	0.87	-0.1
2,428,803	+		MPMX19_02306	0.87	+0.4
2,428,803	+		MPMX19_02306	0.87	-0.2
2,428,803	+		MPMX19_02306	0.87	+0.7
2,428,803	+		MPMX19_02306	0.87	+0.7
2,428,803	+		MPMX19_02306	0.87	-0.9
2,428,803	+		MPMX19_02306	0.87	-0.7
2,428,803	+		MPMX19_02306	0.87	-0.8
2,428,803	+		MPMX19_02306	0.87	-0.1
2,428,803	+		MPMX19_02306	0.87	+0.0
2,428,803	+		MPMX19_02306	0.87	+0.9
2,428,804	-		MPMX19_02306	0.87	-1.8
2,428,804	-		MPMX19_02306	0.87	-1.0
2,428,804	-		MPMX19_02306	0.87	+0.5
2,428,804	-		MPMX19_02306	0.87	-1.4
2,428,804	-		MPMX19_02306	0.87	+0.5
2,428,804	-		MPMX19_02306	0.87	-1.9
2,428,804	-		MPMX19_02306	0.87	-0.5
2,428,804	-		MPMX19_02306	0.87	-0.3
2,428,804	-		MPMX19_02306	0.87	+0.1
2,428,804	-		MPMX19_02306	0.87	-1.2
2,428,804	-		MPMX19_02306	0.87	-0.2
2,428,804	-		MPMX19_02306	0.87	-0.9
2,428,804	-		MPMX19_02306	0.87	-1.4
2,428,804	-		MPMX19_02306	0.87	-0.1
2,428,804	-		MPMX19_02306	0.87	-1.6
2,428,804	-		MPMX19_02306	0.87	+0.4
2,428,804	-		MPMX19_02306	0.87	-0.5
2,428,804	-		MPMX19_02306	0.87	-1.2
2,428,804	-		MPMX19_02306	0.87	-0.6
2,428,804	-		MPMX19_02306	0.87	-0.2
2,428,804	-		MPMX19_02306	0.87	-0.4
2,428,804	-		MPMX19_02306	0.87	+0.1
2,428,804	-		MPMX19_02306	0.87	-0.4
2,428,804	-		MPMX19_02306	0.87	-0.3
2,428,805	+		MPMX19_02306	0.88	-0.3
2,428,805	+		MPMX19_02306	0.88	-3.4
2,428,805	+		MPMX19_02306	0.88	-0.7
2,428,805	+		MPMX19_02306	0.88	-0.6
2,428,805	+		MPMX19_02306	0.88	-0.4
2,428,805	+		MPMX19_02306	0.88	-0.8
2,428,805	+		MPMX19_02306	0.88	-0.5
2,428,805	+		MPMX19_02306	0.88	-0.3
2,428,805	+		MPMX19_02306	0.88	+0.1
2,428,806	-		MPMX19_02306	0.88	+0.5
2,428,806	-		MPMX19_02306	0.88	+1.0
2,428,806	-		MPMX19_02306	0.88	-1.4
2,428,806	-		MPMX19_02306	0.88	-1.0
2,428,806	-		MPMX19_02306	0.88	-0.7
2,428,806	-		MPMX19_02306	0.88	-0.6
2,428,806	-		MPMX19_02306	0.88	+0.3
2,428,806	-		MPMX19_02306	0.88	+1.1
2,428,806	-		MPMX19_02306	0.88	-0.7
2,428,806	-		MPMX19_02306	0.88	-1.2
2,428,806	-		MPMX19_02306	0.88	-1.2
2,428,878	+				-0.6
2,428,878	+				-1.0
2,428,878	+				+0.4
2,428,878	+				-0.2
2,428,879	-				-0.0
2,428,879	-				-0.7
2,428,879	-				-0.2
2,428,908	+				-1.7
2,428,908	+				+1.1
2,428,908	+				+2.1
2,428,908	+				-2.0
2,428,908	+				+0.3
2,428,908	+				-0.7
2,428,908	+				-0.7
2,428,908	+				-1.0
2,428,908	+				-0.2
2,428,908	+				-1.2
2,428,909	-				+0.0
2,428,909	-				+0.6
2,428,909	-				+0.8
2,428,909	-				-0.2
2,428,909	-				+0.4
2,428,909	-				+0.3
2,428,909	-				+0.9
2,429,063	+		MPMX19_02307	0.23	-2.0
2,429,063	+		MPMX19_02307	0.23	-0.2
2,429,063	+		MPMX19_02307	0.23	-1.1
2,429,064	-		MPMX19_02307	0.23	-0.5
2,429,064	-		MPMX19_02307	0.23	-1.1
2,429,064	-		MPMX19_02307	0.23	-0.2
2,429,064	-		MPMX19_02307	0.23	-0.1
2,429,203	-		MPMX19_02307	0.47	-0.3
2,429,203	-		MPMX19_02307	0.47	-1.4
2,429,371	+		MPMX19_02307	0.76	-0.2
2,429,371	+		MPMX19_02307	0.76	-2.0
2,429,371	+		MPMX19_02307	0.76	-0.7
2,429,371	+		MPMX19_02307	0.76	-0.5
2,429,371	+		MPMX19_02307	0.76	+0.1
2,429,372	-		MPMX19_02307	0.77	+0.1
2,429,372	-		MPMX19_02307	0.77	-0.0
2,429,372	-		MPMX19_02307	0.77	-0.7
2,429,372	-		MPMX19_02307	0.77	-0.7
2,429,372	-		MPMX19_02307	0.77	-2.2
2,429,372	-		MPMX19_02307	0.77	-1.4
2,429,647	+				-0.3
2,429,647	+				-0.9
2,429,647	+				+0.8
2,429,647	+				-1.0
2,429,647	+				-0.6
2,429,647	+				-0.2
2,429,647	+				-0.8
2,429,647	+				-0.6
2,429,647	+				+1.0
2,429,647	+				-0.9
2,429,647	+				-0.1
2,429,647	+				+0.5
2,429,647	+				-0.0
2,429,647	+				+0.3
2,429,647	+				-1.2
2,429,648	-				-0.8
2,429,648	-				-2.2
2,429,648	-				-1.0
2,429,648	-				+0.5
2,429,648	-				+0.7
2,429,648	-				-0.4
2,429,648	-				-0.5
2,429,648	-				+1.2
2,429,648	-				-1.3
2,429,648	-				-0.5
2,429,707	+				+0.3
2,429,707	+				-1.9
2,429,707	+				-1.2
2,429,707	+				+0.3
2,429,707	+				-0.6
2,429,707	+				-1.2
2,429,707	+				-0.3
2,429,707	+				+0.4
2,429,707	+				+0.8
2,429,707	+				-1.4
2,429,707	+				+0.2
2,429,707	+				+0.6
2,429,707	+				-0.4
2,429,707	+				+1.1
2,429,707	+				+0.1
2,429,707	+				-0.1
2,429,707	+				+0.3
2,429,707	+				+0.4
2,429,707	+				+0.4
2,429,707	+				-0.4
2,429,707	+				-0.6
2,429,707	+				-0.0
2,429,707	+				-0.6
2,429,707	+				-0.9
2,429,707	+				-0.0
2,429,707	+				+0.9
2,429,707	+				-0.7
2,429,707	+				-0.0
2,429,707	+				+0.4
2,429,707	+				+1.0
2,429,707	+				-0.8
2,429,707	+				-0.1
2,429,707	+				+0.3
2,429,707	+				-0.3
2,429,708	-				+0.4
2,429,708	-				-0.3
2,429,708	-				+0.3
2,429,708	-				-0.9
2,429,708	-				+0.5
2,429,708	-				-1.0
2,429,708	-				-0.5
2,429,708	-				-0.3
2,429,708	-				-1.8
2,429,708	-				-0.2
2,429,708	-				+1.5
2,429,708	-				-0.9
2,429,708	-				-1.4
2,429,708	-				-0.5
2,429,708	-				+0.6
2,429,708	-				-0.8
2,429,708	-				-0.1
2,429,708	-				+0.1
2,429,708	-				-0.4
2,429,708	-				-0.5
2,429,708	-				+0.8
2,429,708	-				+0.5
2,429,708	-				+1.2
2,430,043	+		MPMX19_02308	0.32	-0.2
2,430,043	+		MPMX19_02308	0.32	-0.2
2,430,043	+		MPMX19_02308	0.32	+0.5
2,430,043	+		MPMX19_02308	0.32	-0.0
2,430,043	+		MPMX19_02308	0.32	-0.6
2,430,043	+		MPMX19_02308	0.32	-1.0
2,430,043	+		MPMX19_02308	0.32	-1.6
2,430,044	-		MPMX19_02308	0.32	-0.5
2,430,044	-		MPMX19_02308	0.32	-0.5
2,430,044	-		MPMX19_02308	0.32	-2.4
2,430,044	-		MPMX19_02308	0.32	-0.4
2,430,044	-		MPMX19_02308	0.32	+0.6
2,430,262	+		MPMX19_02308	0.63	+0.2
2,430,262	+		MPMX19_02308	0.63	+0.8
2,430,262	+		MPMX19_02308	0.63	+0.5
2,430,262	+		MPMX19_02308	0.63	-2.7
2,430,262	+		MPMX19_02308	0.63	-2.1
2,430,262	+		MPMX19_02308	0.63	-0.2
2,430,262	+		MPMX19_02308	0.63	-0.0
2,430,262	+		MPMX19_02308	0.63	-2.1
2,430,263	-		MPMX19_02308	0.63	+0.7
2,430,263	-		MPMX19_02308	0.63	-0.2
2,430,263	-		MPMX19_02308	0.63	+0.5
2,430,263	-		MPMX19_02308	0.63	-1.0
2,430,263	-		MPMX19_02308	0.63	+1.0
2,430,263	-		MPMX19_02308	0.63	-0.5
2,430,263	-		MPMX19_02308	0.63	+1.3
2,430,263	-		MPMX19_02308	0.63	-1.4
2,430,263	-		MPMX19_02308	0.63	+0.4
2,430,263	-		MPMX19_02308	0.63	+0.2
2,430,263	-		MPMX19_02308	0.63	+0.3
2,430,476	+				+0.7
2,430,476	+				-0.5
2,430,476	+				-0.2
2,430,477	-				-1.9
2,430,477	-				-0.3
2,430,477	-				-0.0
2,430,483	+				-2.3
2,430,483	+				+0.6
2,430,484	-				-1.3
2,430,484	-				+0.5
2,430,484	-				-1.6
2,430,484	-				+1.0
2,430,484	-				+0.1