Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02221

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,327,239	+		MPMX19_02220	0.24	+0.1
2,327,239	+		MPMX19_02220	0.24	-0.2
2,327,239	+		MPMX19_02220	0.24	+0.2
2,327,239	+		MPMX19_02220	0.24	-0.6
2,327,239	+		MPMX19_02220	0.24	-0.8
2,327,240	-		MPMX19_02220	0.24	-1.0
2,327,240	-		MPMX19_02220	0.24	-1.2
2,327,240	-		MPMX19_02220	0.24	+0.3
2,327,605	+		MPMX19_02220	0.57	-0.4
2,327,605	+		MPMX19_02220	0.57	-1.0
2,327,605	+		MPMX19_02220	0.57	-0.3
2,327,605	+		MPMX19_02220	0.57	+0.5
2,327,605	+		MPMX19_02220	0.57	-0.9
2,327,605	+		MPMX19_02220	0.57	-0.4
2,327,606	-		MPMX19_02220	0.57	-0.0
2,327,606	-		MPMX19_02220	0.57	-1.4
2,327,606	-		MPMX19_02220	0.57	-0.1
2,328,010	+				-1.0
2,328,010	+				-0.8
2,328,010	+				-1.0
2,328,010	+				-1.0
2,328,010	+				-1.2
2,328,010	+				+2.2
2,328,011	-				-0.2
2,328,011	-				-0.2
2,328,011	-				-0.2
2,328,011	-				+0.4
2,328,011	-				+0.1
2,328,011	-				+0.2
2,328,011	-				-0.2
2,328,011	-				+0.1
2,328,011	-				-1.1
2,328,091	+				-1.0
2,328,092	-				-0.1
2,328,092	-				-1.4
2,328,128	+				+0.2
2,328,128	+				+0.3
2,328,128	+				-1.0
2,328,129	-				-1.8
2,328,129	-				-0.6
2,328,515	+		MPMX19_02221	0.61	-0.2
2,328,515	+		MPMX19_02221	0.61	-1.0
2,328,515	+		MPMX19_02221	0.61	-0.1
2,328,515	+		MPMX19_02221	0.61	-1.1
2,328,515	+		MPMX19_02221	0.61	-1.7
2,328,515	+		MPMX19_02221	0.61	-0.0
2,328,515	+		MPMX19_02221	0.61	-0.3
2,328,515	+		MPMX19_02221	0.61	+0.2
2,328,515	+		MPMX19_02221	0.61	-0.6
2,328,515	+		MPMX19_02221	0.61	-2.0
2,328,516	-		MPMX19_02221	0.61	+0.1
2,328,516	-		MPMX19_02221	0.61	-1.2
2,328,516	-		MPMX19_02221	0.61	-0.6
2,328,516	-		MPMX19_02221	0.61	-0.6
2,328,516	-		MPMX19_02221	0.61	-0.4
2,328,516	-		MPMX19_02221	0.61	-1.8
2,328,516	-		MPMX19_02221	0.61	-1.3
2,328,516	-		MPMX19_02221	0.61	-0.5
2,328,516	-		MPMX19_02221	0.61	+0.3
2,328,516	-		MPMX19_02221	0.61	+1.8
2,328,516	-		MPMX19_02221	0.61	+0.2
2,328,516	-		MPMX19_02221	0.61	-0.9
2,328,516	-		MPMX19_02221	0.61	+0.6
2,328,516	-		MPMX19_02221	0.61	-0.7
2,328,516	-		MPMX19_02221	0.61	-0.8
2,328,516	-		MPMX19_02221	0.61	-0.6
2,328,652	+		MPMX19_02221	0.86	-2.0
2,328,652	+		MPMX19_02221	0.86	-0.6
2,328,652	+		MPMX19_02221	0.86	-1.0
2,328,653	-		MPMX19_02221	0.86	+0.2
2,328,653	-		MPMX19_02221	0.86	+0.3
2,328,653	-		MPMX19_02221	0.86	-1.4
2,328,653	-		MPMX19_02221	0.86	+0.3
2,328,653	-		MPMX19_02221	0.86	-1.1
2,328,653	-		MPMX19_02221	0.86	-0.8
2,328,753	+				-1.1
2,328,754	-				-1.0
2,328,773	+				-2.9
2,328,774	-				+0.8
2,329,130	-		MPMX19_02222	0.36	-0.1
2,329,130	-		MPMX19_02222	0.36	-1.3
2,329,130	-		MPMX19_02222	0.36	-0.2
2,329,130	-		MPMX19_02222	0.36	-0.9
2,329,130	-		MPMX19_02222	0.36	-0.3
2,329,130	-		MPMX19_02222	0.36	-2.0
2,329,259	-		MPMX19_02222	0.51	-1.3
2,329,453	+		MPMX19_02222	0.74	-1.7
2,329,453	+		MPMX19_02222	0.74	-0.3
2,329,453	+		MPMX19_02222	0.74	-1.2
2,329,453	+		MPMX19_02222	0.74	-0.2
2,329,453	+		MPMX19_02222	0.74	-0.0
2,329,453	+		MPMX19_02222	0.74	-2.5
2,329,453	+		MPMX19_02222	0.74	-0.1
2,329,453	+		MPMX19_02222	0.74	-1.0
2,329,453	+		MPMX19_02222	0.74	-1.0
2,329,453	+		MPMX19_02222	0.74	+0.0
2,329,453	+		MPMX19_02222	0.74	-1.0
2,329,453	+		MPMX19_02222	0.74	-0.8
2,329,453	+		MPMX19_02222	0.74	-1.0
2,329,453	+		MPMX19_02222	0.74	-1.3
2,329,453	+		MPMX19_02222	0.74	-2.1
2,329,453	+		MPMX19_02222	0.74	+0.5
2,329,453	+		MPMX19_02222	0.74	-1.0
2,329,453	+		MPMX19_02222	0.74	-0.8
2,329,453	+		MPMX19_02222	0.74	+0.9
2,329,453	+		MPMX19_02222	0.74	-0.6
2,329,453	+		MPMX19_02222	0.74	-0.6
2,329,453	+		MPMX19_02222	0.74	+1.0
2,329,453	+		MPMX19_02222	0.74	-0.6
2,329,453	+		MPMX19_02222	0.74	+0.1
2,329,453	+		MPMX19_02222	0.74	-0.4
2,329,453	+		MPMX19_02222	0.74	+0.2
2,329,453	+		MPMX19_02222	0.74	+0.3
2,329,453	+		MPMX19_02222	0.74	+0.2
2,329,453	+		MPMX19_02222	0.74	-1.2
2,329,453	+		MPMX19_02222	0.74	+0.6
2,329,453	+		MPMX19_02222	0.74	-0.0
2,329,453	+		MPMX19_02222	0.74	-0.2
2,329,453	+		MPMX19_02222	0.74	-0.2
2,329,453	+		MPMX19_02222	0.74	-0.7
2,329,453	+		MPMX19_02222	0.74	+0.5
2,329,453	+		MPMX19_02222	0.74	+0.2
2,329,453	+		MPMX19_02222	0.74	-1.0
2,329,453	+		MPMX19_02222	0.74	-0.7
2,329,453	+		MPMX19_02222	0.74	+0.3
2,329,453	+		MPMX19_02222	0.74	-0.2
2,329,453	+		MPMX19_02222	0.74	-1.2
2,329,454	-		MPMX19_02222	0.74	+1.0
2,329,454	-		MPMX19_02222	0.74	+0.4
2,329,454	-		MPMX19_02222	0.74	-1.0
2,329,454	-		MPMX19_02222	0.74	-1.2
2,329,454	-		MPMX19_02222	0.74	+1.2
2,329,454	-		MPMX19_02222	0.74	+0.8
2,329,454	-		MPMX19_02222	0.74	+0.3
2,329,454	-		MPMX19_02222	0.74	+0.2
2,329,454	-		MPMX19_02222	0.74	-0.8
2,329,454	-		MPMX19_02222	0.74	-0.4
2,329,454	-		MPMX19_02222	0.74	-1.2
2,329,454	-		MPMX19_02222	0.74	+0.4
2,329,454	-		MPMX19_02222	0.74	-0.0
2,329,454	-		MPMX19_02222	0.74	-0.3
2,329,454	-		MPMX19_02222	0.74	+0.4
2,329,454	-		MPMX19_02222	0.74	-1.6
2,329,454	-		MPMX19_02222	0.74	+0.6
2,329,454	-		MPMX19_02222	0.74	-1.0
2,329,454	-		MPMX19_02222	0.74	+0.8
2,329,454	-		MPMX19_02222	0.74	-0.6
2,329,454	-		MPMX19_02222	0.74	+0.8
2,329,454	-		MPMX19_02222	0.74	-0.1
2,329,454	-		MPMX19_02222	0.74	+0.2
2,329,454	-		MPMX19_02222	0.74	-1.1
2,329,454	-		MPMX19_02222	0.74	-0.1
2,329,454	-		MPMX19_02222	0.74	-1.8
2,329,454	-		MPMX19_02222	0.74	-0.2
2,329,454	-		MPMX19_02222	0.74	-0.2
2,329,454	-		MPMX19_02222	0.74	+0.4
2,329,454	-		MPMX19_02222	0.74	+1.1
2,329,454	-		MPMX19_02222	0.74	+0.6
2,329,454	-		MPMX19_02222	0.74	-0.5
2,329,454	-		MPMX19_02222	0.74	-1.4
2,329,454	-		MPMX19_02222	0.74	-2.9
2,329,454	-		MPMX19_02222	0.74	-0.4
2,329,454	-		MPMX19_02222	0.74	+1.3
2,329,454	-		MPMX19_02222	0.74	-0.6
2,329,504	+		MPMX19_02222	0.79	-2.0
2,329,504	-		MPMX19_02222	0.79	-0.6
2,329,505	-		MPMX19_02222	0.80	-1.5
2,329,505	-		MPMX19_02222	0.80	-0.1
2,329,505	-		MPMX19_02222	0.80	+0.3
2,329,505	-		MPMX19_02222	0.80	-1.1
2,329,505	-		MPMX19_02222	0.80	+0.2
2,329,702	+				-0.1
2,329,702	+				-0.1
2,329,702	+				-0.0
2,329,702	+				-1.6
2,329,702	+				-1.1
2,329,702	+				-1.1
2,329,702	+				-0.1
2,329,702	+				+0.2
2,329,702	+				-1.2
2,329,702	+				-1.2
2,329,702	+				-1.2
2,329,702	+				-1.0
2,329,702	+				-1.1
2,329,702	+				-0.8
2,329,702	+				-0.2
2,329,702	+				-2.1
2,329,702	+				+0.3
2,329,702	+				-0.6
2,329,702	+				+0.2
2,329,702	+				+0.3
2,329,702	+				-0.8
2,329,703	-				-1.2
2,329,703	-				-0.0
2,329,703	-				-1.9
2,329,703	-				+0.9
2,329,703	-				-0.0
2,329,703	-				-0.4
2,329,703	-				-1.1
2,329,703	-				-0.7
2,329,703	-				+0.5
2,329,703	-				+0.6
2,329,703	-				+0.8
2,329,703	-				-1.1
2,329,703	-				-0.0
2,329,722	+				-1.6
2,329,722	+				+0.2
2,329,722	+				-0.8
2,329,722	+				-0.8
2,329,722	+				+0.1
2,329,722	+				+0.2
2,329,722	+				-1.8
2,329,722	+				-0.8
2,329,722	+				-0.5
2,329,722	+				-0.5
2,329,722	+				-0.0
2,329,722	+				-1.4
2,329,722	+				-0.1
2,329,722	+				-0.6
2,329,722	+				+0.6
2,329,722	+				-0.0
2,329,722	+				+0.8
2,329,722	+				-1.7
2,329,722	+				+0.5
2,329,722	+				-0.3
2,329,722	+				-0.1
2,329,722	+				-1.4
2,329,722	+				+0.3
2,329,722	+				-1.3
2,329,722	+				-0.5
2,329,722	+				+0.3
2,329,723	-				-1.1
2,329,723	-				-1.5
2,329,723	-				+0.1
2,329,723	-				+0.0
2,329,723	-				-0.0
2,329,723	-				-0.7
2,329,723	-				-0.2
2,329,723	-				-1.4
2,329,723	-				+0.4
2,329,723	-				-1.4
2,329,723	-				+0.3
2,329,723	-				-0.6
2,329,723	-				+0.1
2,329,723	-				-0.6