Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02149

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,245,280	+				+0.4
2,245,280	+				-1.2
2,245,280	+				-2.0
2,245,280	+				+0.5
2,245,280	+				-0.4
2,245,280	+				-1.2
2,245,280	+				+0.6
2,245,280	+				+0.7
2,245,280	+				-0.1
2,245,280	+				+0.6
2,245,280	+				-0.6
2,245,281	-				-0.4
2,245,281	-				-0.6
2,245,281	-				+0.1
2,245,281	-				+0.3
2,245,281	-				-0.4
2,245,281	-				+0.6
2,245,281	-				+1.1
2,245,281	-				-1.4
2,245,281	-				-0.4
2,245,281	-				+0.7
2,245,283	+				+0.0
2,245,283	+				-0.1
2,245,283	+				-1.7
2,245,283	+				-1.4
2,245,283	+				+0.9
2,245,283	+				-0.3
2,245,283	+				+0.1
2,245,283	+				-0.2
2,245,283	+				+0.3
2,245,283	+				-2.5
2,245,283	+				+0.3
2,245,283	+				-2.1
2,245,283	+				-1.0
2,245,283	+				+0.1
2,245,283	+				+1.7
2,245,283	+				-0.5
2,245,283	+				+0.4
2,245,283	+				+0.5
2,245,283	+				+0.6
2,245,283	+				-2.6
2,245,284	-				-0.2
2,245,284	-				+0.6
2,245,284	-				+0.9
2,245,284	-				-2.3
2,245,284	-				-0.4
2,245,284	-				+0.1
2,245,284	-				-1.3
2,245,284	-				-0.2
2,245,284	-				-2.4
2,245,284	-				-0.1
2,245,284	-				-0.6
2,245,284	-				+0.1
2,245,284	-				+0.5
2,245,284	-				+0.7
2,245,284	-				+0.8
2,245,403	+		MPMX19_02148	0.24	-0.8
2,245,403	+		MPMX19_02148	0.24	-1.1
2,245,403	+		MPMX19_02148	0.24	-0.0
2,245,403	+		MPMX19_02148	0.24	-1.3
2,245,403	+		MPMX19_02148	0.24	-0.7
2,245,403	+		MPMX19_02148	0.24	-1.1
2,245,403	+		MPMX19_02148	0.24	+0.1
2,245,403	+		MPMX19_02148	0.24	-0.1
2,245,403	+		MPMX19_02148	0.24	+0.4
2,245,403	+		MPMX19_02148	0.24	-0.3
2,245,403	+		MPMX19_02148	0.24	-1.1
2,245,403	+		MPMX19_02148	0.24	-1.5
2,245,403	+		MPMX19_02148	0.24	-0.4
2,245,403	+		MPMX19_02148	0.24	-1.6
2,245,403	+		MPMX19_02148	0.24	-0.2
2,245,403	+		MPMX19_02148	0.24	-2.0
2,245,404	-		MPMX19_02148	0.24	+0.4
2,245,404	-		MPMX19_02148	0.24	+0.1
2,245,404	-		MPMX19_02148	0.24	+0.9
2,245,404	-		MPMX19_02148	0.24	+0.6
2,245,404	-		MPMX19_02148	0.24	-1.1
2,245,404	-		MPMX19_02148	0.24	+0.6
2,245,404	-		MPMX19_02148	0.24	-1.7
2,245,404	-		MPMX19_02148	0.24	+0.2
2,245,404	-		MPMX19_02148	0.24	-0.9
2,245,404	-		MPMX19_02148	0.24	+0.7
2,245,404	-		MPMX19_02148	0.24	-1.1
2,245,404	-		MPMX19_02148	0.24	+0.3
2,245,404	-		MPMX19_02148	0.24	-0.7
2,245,487	+		MPMX19_02148	0.41	+0.1
2,245,487	+		MPMX19_02148	0.41	+0.6
2,245,487	+		MPMX19_02148	0.41	-0.3
2,245,487	+		MPMX19_02148	0.41	-1.1
2,245,487	+		MPMX19_02148	0.41	-1.0
2,245,487	+		MPMX19_02148	0.41	-1.3
2,245,487	+		MPMX19_02148	0.41	-1.0
2,245,487	+		MPMX19_02148	0.41	+1.4
2,245,487	+		MPMX19_02148	0.41	+0.1
2,245,487	+		MPMX19_02148	0.41	+1.0
2,245,487	+		MPMX19_02148	0.41	-1.6
2,245,487	+		MPMX19_02148	0.41	+0.4
2,245,487	+		MPMX19_02148	0.41	-0.2
2,245,487	+		MPMX19_02148	0.41	-1.6
2,245,487	+		MPMX19_02148	0.41	-0.5
2,245,487	+		MPMX19_02148	0.41	-2.5
2,245,487	+		MPMX19_02148	0.41	+0.3
2,245,487	+		MPMX19_02148	0.41	-0.0
2,245,487	+		MPMX19_02148	0.41	-0.4
2,245,487	+		MPMX19_02148	0.41	-0.8
2,245,487	+		MPMX19_02148	0.41	-1.7
2,245,487	+		MPMX19_02148	0.41	+0.4
2,245,487	+		MPMX19_02148	0.41	+0.0
2,245,488	-		MPMX19_02148	0.41	+0.5
2,245,488	-		MPMX19_02148	0.41	-0.3
2,245,488	-		MPMX19_02148	0.41	-0.2
2,245,488	-		MPMX19_02148	0.41	+0.6
2,245,488	-		MPMX19_02148	0.41	-1.0
2,245,488	-		MPMX19_02148	0.41	-0.4
2,245,488	-		MPMX19_02148	0.41	+0.9
2,245,488	-		MPMX19_02148	0.41	+0.7
2,245,488	-		MPMX19_02148	0.41	-0.3
2,245,488	-		MPMX19_02148	0.41	-0.3
2,245,488	-		MPMX19_02148	0.41	+0.5
2,245,488	-		MPMX19_02148	0.41	-2.0
2,245,488	-		MPMX19_02148	0.41	-0.4
2,245,488	-		MPMX19_02148	0.41	-0.1
2,245,488	-		MPMX19_02148	0.41	-0.4
2,245,488	-		MPMX19_02148	0.41	-0.7
2,245,488	-		MPMX19_02148	0.41	-0.1
2,245,490	+		MPMX19_02148	0.41	-0.1
2,245,490	+		MPMX19_02148	0.41	-1.4
2,245,490	+		MPMX19_02148	0.41	+0.1
2,245,491	-		MPMX19_02148	0.41	-0.7
2,245,491	-		MPMX19_02148	0.41	-1.2
2,245,491	-		MPMX19_02148	0.41	-0.0
2,245,567	-		MPMX19_02148	0.56	-2.4
2,245,567	-		MPMX19_02148	0.56	-0.3
2,245,567	-		MPMX19_02148	0.56	-2.0
2,245,567	-		MPMX19_02148	0.56	+0.0
2,245,567	-		MPMX19_02148	0.56	-0.3
2,245,625	+		MPMX19_02148	0.67	-0.4
2,245,625	+		MPMX19_02148	0.67	+0.1
2,245,625	+		MPMX19_02148	0.67	-0.7
2,245,625	+		MPMX19_02148	0.67	-1.6
2,245,625	+		MPMX19_02148	0.67	+1.1
2,245,625	+		MPMX19_02148	0.67	+0.5
2,245,625	+		MPMX19_02148	0.67	-1.6
2,245,626	-		MPMX19_02148	0.68	-0.4
2,245,626	-		MPMX19_02148	0.68	+0.5
2,245,626	-		MPMX19_02148	0.68	-0.4
2,245,626	-		MPMX19_02148	0.68	-1.5
2,245,626	-		MPMX19_02148	0.68	+1.3
2,245,626	-		MPMX19_02148	0.68	-0.4
2,245,626	-		MPMX19_02148	0.68	+1.9
2,245,626	-		MPMX19_02148	0.68	+1.5
2,245,626	-		MPMX19_02148	0.68	-1.4
2,246,090	+		MPMX19_02149	0.34	-0.8
2,246,091	-		MPMX19_02149	0.34	+0.0
2,246,091	-		MPMX19_02149	0.34	-2.3
2,246,091	-		MPMX19_02149	0.34	-0.4
2,246,774	-				+0.5
2,247,010	+		MPMX19_02150	0.78	+0.4
2,247,011	-		MPMX19_02150	0.78	-1.2
2,247,273	+		MPMX19_02151	0.12	+0.9
2,247,273	+		MPMX19_02151	0.12	+1.3
2,247,273	+		MPMX19_02151	0.12	+0.5
2,247,273	+		MPMX19_02151	0.12	+0.7
2,247,273	+		MPMX19_02151	0.12	+0.2
2,247,273	+		MPMX19_02151	0.12	+0.1
2,247,273	+		MPMX19_02151	0.12	-0.8
2,247,273	+		MPMX19_02151	0.12	+0.3
2,247,273	+		MPMX19_02151	0.12	-0.5
2,247,273	+		MPMX19_02151	0.12	-1.0
2,247,273	+		MPMX19_02151	0.12	+0.2
2,247,273	+		MPMX19_02151	0.12	+0.2
2,247,273	+		MPMX19_02151	0.12	-0.6
2,247,273	+		MPMX19_02151	0.12	+0.4
2,247,273	+		MPMX19_02151	0.12	+0.2
2,247,273	+		MPMX19_02151	0.12	+0.7
2,247,273	+		MPMX19_02151	0.12	+0.0
2,247,273	+		MPMX19_02151	0.12	+0.2
2,247,273	+		MPMX19_02151	0.12	+2.2
2,247,273	+		MPMX19_02151	0.12	+0.2
2,247,273	+		MPMX19_02151	0.12	+0.2
2,247,273	+		MPMX19_02151	0.12	+0.2
2,247,273	+		MPMX19_02151	0.12	-0.3
2,247,273	+		MPMX19_02151	0.12	-0.8
2,247,273	+		MPMX19_02151	0.12	-0.1
2,247,273	+		MPMX19_02151	0.12	+0.6
2,247,273	+		MPMX19_02151	0.12	+0.4
2,247,273	+		MPMX19_02151	0.12	-0.0
2,247,273	+		MPMX19_02151	0.12	-0.3
2,247,274	-		MPMX19_02151	0.12	-0.1
2,247,274	-		MPMX19_02151	0.12	+0.1
2,247,274	-		MPMX19_02151	0.12	-0.4
2,247,274	-		MPMX19_02151	0.12	+0.6
2,247,274	-		MPMX19_02151	0.12	-0.5
2,247,274	-		MPMX19_02151	0.12	+1.0
2,247,274	-		MPMX19_02151	0.12	-0.7
2,247,274	-		MPMX19_02151	0.12	+0.1
2,247,274	-		MPMX19_02151	0.12	-0.3
2,247,274	-		MPMX19_02151	0.12	+0.9
2,247,274	-		MPMX19_02151	0.12	+0.2
2,247,274	-		MPMX19_02151	0.12	-3.1
2,247,274	-		MPMX19_02151	0.12	+1.3
2,247,274	-		MPMX19_02151	0.12	-0.8
2,247,274	-		MPMX19_02151	0.12	+0.0
2,247,274	-		MPMX19_02151	0.12	-1.8
2,247,274	-		MPMX19_02151	0.12	-2.5
2,247,274	-		MPMX19_02151	0.12	-0.4
2,247,274	-		MPMX19_02151	0.12	-0.6
2,247,274	-		MPMX19_02151	0.12	+0.2
2,247,274	-		MPMX19_02151	0.12	-0.6
2,247,274	-		MPMX19_02151	0.12	-0.2
2,247,274	-		MPMX19_02151	0.12	-0.2
2,247,274	-		MPMX19_02151	0.12	-0.5
2,247,274	-		MPMX19_02151	0.12	+1.5
2,247,274	-		MPMX19_02151	0.12	-0.7
2,247,274	-		MPMX19_02151	0.12	-0.4
2,247,297	+		MPMX19_02151	0.13	-1.2
2,247,297	+		MPMX19_02151	0.13	-1.7
2,247,298	-		MPMX19_02151	0.13	+0.4
2,247,298	-		MPMX19_02151	0.13	-1.0
2,247,348	+		MPMX19_02151	0.16	-1.0
2,247,348	+		MPMX19_02151	0.16	-0.2
2,247,348	+		MPMX19_02151	0.16	-0.1
2,247,348	+		MPMX19_02151	0.16	-0.6
2,247,348	+		MPMX19_02151	0.16	-0.3
2,247,348	+		MPMX19_02151	0.16	-1.1
2,247,348	+		MPMX19_02151	0.16	+0.3
2,247,348	+		MPMX19_02151	0.16	+1.0
2,247,348	+		MPMX19_02151	0.16	+0.5
2,247,348	+		MPMX19_02151	0.16	-2.1
2,247,348	+		MPMX19_02151	0.16	+1.4
2,247,348	+		MPMX19_02151	0.16	-0.7
2,247,348	+		MPMX19_02151	0.16	-0.3
2,247,349	-		MPMX19_02151	0.16	+0.0
2,247,349	-		MPMX19_02151	0.16	+0.2
2,247,349	-		MPMX19_02151	0.16	-1.9
2,247,349	-		MPMX19_02151	0.16	-0.7
2,247,349	-		MPMX19_02151	0.16	-1.4
2,247,349	-		MPMX19_02151	0.16	-0.4
2,247,349	-		MPMX19_02151	0.16	+1.0
2,247,375	+		MPMX19_02151	0.17	-1.3
2,247,375	+		MPMX19_02151	0.17	-0.8
2,247,375	+		MPMX19_02151	0.17	-0.3
2,247,375	+		MPMX19_02151	0.17	+0.1
2,247,376	-		MPMX19_02151	0.17	-0.3
2,247,376	-		MPMX19_02151	0.17	-0.9
2,247,376	-		MPMX19_02151	0.17	+0.4
2,247,376	-		MPMX19_02151	0.17	-0.6
2,247,376	-		MPMX19_02151	0.17	-0.4
2,247,376	-		MPMX19_02151	0.17	+0.7
2,247,432	+		MPMX19_02151	0.21	-0.6
2,247,432	+		MPMX19_02151	0.21	-0.6
2,247,432	+		MPMX19_02151	0.21	-0.3
2,247,432	+		MPMX19_02151	0.21	-0.6
2,247,432	+		MPMX19_02151	0.21	-0.3
2,247,432	+		MPMX19_02151	0.21	-0.0
2,247,432	+		MPMX19_02151	0.21	-0.8
2,247,433	-		MPMX19_02151	0.21	+0.3
2,247,433	-		MPMX19_02151	0.21	+0.4
2,247,519	+		MPMX19_02151	0.26	-0.3
2,247,519	+		MPMX19_02151	0.26	+0.6
2,247,519	+		MPMX19_02151	0.26	-0.1
2,247,519	+		MPMX19_02151	0.26	-0.4
2,247,519	+		MPMX19_02151	0.26	-0.8
2,247,519	+		MPMX19_02151	0.26	-0.7
2,247,519	+		MPMX19_02151	0.26	+0.7
2,247,519	+		MPMX19_02151	0.26	-0.4
2,247,520	-		MPMX19_02151	0.26	+0.4
2,247,520	-		MPMX19_02151	0.26	+1.2
2,247,520	-		MPMX19_02151	0.26	-1.4
2,247,520	-		MPMX19_02151	0.26	+0.5
2,247,520	-		MPMX19_02151	0.26	-0.8
2,247,520	-		MPMX19_02151	0.26	-0.6
2,247,652	+		MPMX19_02151	0.33	-0.6
2,247,652	+		MPMX19_02151	0.33	+1.1
2,247,652	+		MPMX19_02151	0.33	+1.5
2,247,652	+		MPMX19_02151	0.33	+0.3
2,247,652	+		MPMX19_02151	0.33	-0.2
2,247,652	+		MPMX19_02151	0.33	+0.7
2,247,652	+		MPMX19_02151	0.33	-1.1
2,247,652	+		MPMX19_02151	0.33	-0.1
2,247,653	-		MPMX19_02151	0.33	-0.5
2,247,653	-		MPMX19_02151	0.33	-0.7
2,247,653	-		MPMX19_02151	0.33	-1.3
2,247,653	-		MPMX19_02151	0.33	+0.4
2,247,653	-		MPMX19_02151	0.33	+0.3