Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02145

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,242,592	+		MPMX19_02143	0.82	-0.7
2,242,592	+		MPMX19_02143	0.82	-0.3
2,242,592	+		MPMX19_02143	0.82	-0.3
2,242,592	+		MPMX19_02143	0.82	+0.0
2,242,593	-		MPMX19_02143	0.82	+0.9
2,242,593	-		MPMX19_02143	0.82	-0.6
2,242,593	-		MPMX19_02143	0.82	-0.9
2,242,593	-		MPMX19_02143	0.82	+0.2
2,242,593	-		MPMX19_02143	0.82	-1.1
2,242,593	-		MPMX19_02143	0.82	+0.5
2,242,629	+				-0.3
2,242,629	+				+0.0
2,242,629	+				-1.1
2,242,630	-				-0.1
2,242,630	-				-0.1
2,242,630	-				-0.8
2,242,630	-				-0.0
2,242,630	-				-1.0
2,242,630	-				-0.1
2,242,630	-				+0.5
2,242,630	-				+0.1
2,242,630	-				+0.6
2,242,630	-				+0.7
2,242,630	-				-0.7
2,242,630	-				-0.0
2,242,684	+				+0.7
2,242,827	+		MPMX19_02144	0.27	-0.6
2,242,827	+		MPMX19_02144	0.27	-0.1
2,242,827	+		MPMX19_02144	0.27	-0.7
2,242,827	+		MPMX19_02144	0.27	-1.1
2,242,827	+		MPMX19_02144	0.27	-0.9
2,242,828	-		MPMX19_02144	0.28	-0.4
2,242,828	-		MPMX19_02144	0.28	-0.9
2,242,828	-		MPMX19_02144	0.28	-0.7
2,242,828	-		MPMX19_02144	0.28	-1.7
2,242,828	-		MPMX19_02144	0.28	-0.6
2,242,828	-		MPMX19_02144	0.28	-0.4
2,242,854	+		MPMX19_02144	0.36	+0.1
2,242,854	+		MPMX19_02144	0.36	-1.8
2,242,854	+		MPMX19_02144	0.36	-0.9
2,242,854	+		MPMX19_02144	0.36	-0.4
2,242,854	+		MPMX19_02144	0.36	-0.1
2,242,854	+		MPMX19_02144	0.36	+1.2
2,242,854	+		MPMX19_02144	0.36	-2.6
2,242,854	+		MPMX19_02144	0.36	-0.6
2,242,855	-		MPMX19_02144	0.36	-0.3
2,242,855	-		MPMX19_02144	0.36	+0.9
2,242,855	-		MPMX19_02144	0.36	+0.7
2,242,855	-		MPMX19_02144	0.36	-0.8
2,242,855	-		MPMX19_02144	0.36	-1.0
2,242,855	-		MPMX19_02144	0.36	-0.4
2,242,855	-		MPMX19_02144	0.36	-0.7
2,242,855	-		MPMX19_02144	0.36	+0.7
2,242,855	-		MPMX19_02144	0.36	-0.9
2,242,855	-		MPMX19_02144	0.36	+1.1
2,242,855	-		MPMX19_02144	0.36	-0.1
2,242,855	-		MPMX19_02144	0.36	-1.6
2,242,855	-		MPMX19_02144	0.36	-0.0
2,242,855	-		MPMX19_02144	0.36	-1.4
2,242,866	+		MPMX19_02144	0.40	-0.7
2,242,866	+		MPMX19_02144	0.40	-1.4
2,242,866	+		MPMX19_02144	0.40	-0.4
2,242,867	-		MPMX19_02144	0.40	+0.2
2,243,017	+		MPMX19_02144	0.87	+0.4
2,243,017	+		MPMX19_02144	0.87	-0.2
2,243,017	+		MPMX19_02144	0.87	-0.9
2,243,017	+		MPMX19_02144	0.87	-2.7
2,243,018	-		MPMX19_02144	0.87	-0.8
2,243,018	-		MPMX19_02144	0.87	-0.5
2,243,080	+				-0.4
2,243,080	+				+0.1
2,243,081	-				+0.4
2,243,133	+				-0.9
2,243,227	+				-0.9
2,243,228	-				-1.3
2,243,250	-				+0.9
2,243,565	-		MPMX19_02145	0.15	-1.4
2,243,566	+		MPMX19_02145	0.15	+0.8
2,243,566	+		MPMX19_02145	0.15	+0.6
2,243,566	+		MPMX19_02145	0.15	+0.7
2,243,566	+		MPMX19_02145	0.15	+0.5
2,243,566	+		MPMX19_02145	0.15	-0.1
2,243,566	+		MPMX19_02145	0.15	-0.2
2,243,566	+		MPMX19_02145	0.15	-0.1
2,243,566	+		MPMX19_02145	0.15	-0.4
2,243,566	+		MPMX19_02145	0.15	-1.3
2,243,566	+		MPMX19_02145	0.15	-0.4
2,243,566	+		MPMX19_02145	0.15	-1.0
2,243,566	+		MPMX19_02145	0.15	-0.3
2,243,566	+		MPMX19_02145	0.15	-0.5
2,243,566	+		MPMX19_02145	0.15	+1.4
2,243,566	+		MPMX19_02145	0.15	-0.0
2,243,566	+		MPMX19_02145	0.15	+0.4
2,243,566	+		MPMX19_02145	0.15	-1.6
2,243,566	+		MPMX19_02145	0.15	+0.7
2,243,566	+		MPMX19_02145	0.15	-1.4
2,243,566	+		MPMX19_02145	0.15	-0.3
2,243,566	+		MPMX19_02145	0.15	-1.1
2,243,566	+		MPMX19_02145	0.15	+0.4
2,243,566	+		MPMX19_02145	0.15	-1.2
2,243,566	+		MPMX19_02145	0.15	-0.9
2,243,566	+		MPMX19_02145	0.15	-0.6
2,243,566	+		MPMX19_02145	0.15	+0.0
2,243,566	+		MPMX19_02145	0.15	-0.7
2,243,566	+		MPMX19_02145	0.15	+0.4
2,243,566	+		MPMX19_02145	0.15	+0.7
2,243,566	+		MPMX19_02145	0.15	-1.0
2,243,566	+		MPMX19_02145	0.15	-1.0
2,243,567	-		MPMX19_02145	0.15	+0.9
2,243,567	-		MPMX19_02145	0.15	-0.7
2,243,567	-		MPMX19_02145	0.15	-0.0
2,243,567	-		MPMX19_02145	0.15	-0.1
2,243,567	-		MPMX19_02145	0.15	-2.4
2,243,567	-		MPMX19_02145	0.15	+0.0
2,243,567	-		MPMX19_02145	0.15	+0.4
2,243,567	-		MPMX19_02145	0.15	+0.7
2,243,567	-		MPMX19_02145	0.15	+0.1
2,243,567	-		MPMX19_02145	0.15	+0.3
2,243,567	-		MPMX19_02145	0.15	-0.1
2,243,567	-		MPMX19_02145	0.15	+0.3
2,243,567	-		MPMX19_02145	0.15	+1.2
2,243,567	-		MPMX19_02145	0.15	-0.9
2,243,567	-		MPMX19_02145	0.15	-2.1
2,243,567	-		MPMX19_02145	0.15	+0.1
2,243,567	-		MPMX19_02145	0.15	-0.3
2,243,567	-		MPMX19_02145	0.15	-0.9
2,243,567	-		MPMX19_02145	0.15	-1.4
2,243,567	-		MPMX19_02145	0.15	+1.6
2,243,567	-		MPMX19_02145	0.15	-0.1
2,243,926	+		MPMX19_02145	0.65	+1.7
2,243,926	+		MPMX19_02145	0.65	-0.6
2,243,926	+		MPMX19_02145	0.65	-0.7
2,243,926	+		MPMX19_02145	0.65	+0.3
2,243,926	+		MPMX19_02145	0.65	+0.6
2,243,926	+		MPMX19_02145	0.65	-0.0
2,243,927	-		MPMX19_02145	0.65	-0.9
2,243,927	-		MPMX19_02145	0.65	-0.5
2,243,927	-		MPMX19_02145	0.65	-0.3
2,243,927	-		MPMX19_02145	0.65	-0.4
2,243,927	-		MPMX19_02145	0.65	-0.3
2,243,941	+		MPMX19_02145	0.67	+0.3
2,243,941	+		MPMX19_02145	0.67	-1.2
2,244,070	+		MPMX19_02145	0.85	-1.1
2,244,070	+		MPMX19_02145	0.85	+0.9
2,244,070	+		MPMX19_02145	0.85	-1.4
2,244,070	+		MPMX19_02145	0.85	-0.6
2,244,070	+		MPMX19_02145	0.85	+0.3
2,244,070	+		MPMX19_02145	0.85	-0.4
2,244,071	-		MPMX19_02145	0.85	-0.4
2,244,071	-		MPMX19_02145	0.85	-1.1
2,244,071	-		MPMX19_02145	0.85	-0.3
2,244,071	-		MPMX19_02145	0.85	+1.0
2,244,071	-		MPMX19_02145	0.85	-1.4
2,244,071	-		MPMX19_02145	0.85	-1.3
2,244,094	+		MPMX19_02145	0.89	-0.6
2,244,094	+		MPMX19_02145	0.89	-0.1
2,244,094	+		MPMX19_02145	0.89	-1.3
2,244,094	+		MPMX19_02145	0.89	-0.9
2,244,094	+		MPMX19_02145	0.89	-0.6
2,244,094	+		MPMX19_02145	0.89	-1.9
2,244,094	+		MPMX19_02145	0.89	+0.7
2,244,094	+		MPMX19_02145	0.89	+0.9
2,244,094	+		MPMX19_02145	0.89	+0.3
2,244,094	+		MPMX19_02145	0.89	-0.7
2,244,095	-		MPMX19_02145	0.89	+1.3
2,244,095	-		MPMX19_02145	0.89	-0.8
2,244,095	-		MPMX19_02145	0.89	-1.4
2,244,095	-		MPMX19_02145	0.89	+0.6
2,244,095	-		MPMX19_02145	0.89	-2.4
2,244,095	-		MPMX19_02145	0.89	-0.6
2,244,172	+				+1.0
2,244,172	+				+0.7
2,244,173	-				-1.2
2,244,173	-				+0.2
2,244,449	-				-0.8
2,244,527	+				+0.7