Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02082

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,180,389	+				-0.8
2,180,389	+				+0.7
2,180,390	-				+1.7
2,180,390	-				-1.0
2,180,390	-				-0.4
2,180,390	-				+0.4
2,180,390	-				-0.6
2,180,390	-				+0.6
2,180,390	-				-1.3
2,180,920	+		MPMX19_02082	0.45	-0.5
2,180,920	+		MPMX19_02082	0.45	-1.1
2,180,921	-		MPMX19_02082	0.45	-0.4
2,180,921	-		MPMX19_02082	0.45	+0.4
2,180,977	+		MPMX19_02082	0.49	-0.6
2,180,977	+		MPMX19_02082	0.49	-1.0
2,180,977	+		MPMX19_02082	0.49	-0.6
2,180,977	+		MPMX19_02082	0.49	-2.0
2,180,977	+		MPMX19_02082	0.49	-0.8
2,180,977	+		MPMX19_02082	0.49	+0.7
2,180,977	+		MPMX19_02082	0.49	-2.1
2,180,977	+		MPMX19_02082	0.49	+0.5
2,180,977	+		MPMX19_02082	0.49	-0.8
2,180,977	+		MPMX19_02082	0.49	-0.3
2,180,977	+		MPMX19_02082	0.49	-0.4
2,180,977	+		MPMX19_02082	0.49	-1.6
2,180,977	+		MPMX19_02082	0.49	-0.0
2,180,977	+		MPMX19_02082	0.49	-1.1
2,180,977	+		MPMX19_02082	0.49	-0.5
2,180,977	+		MPMX19_02082	0.49	-0.8
2,180,977	+		MPMX19_02082	0.49	-0.0
2,180,977	+		MPMX19_02082	0.49	-1.2
2,180,977	+		MPMX19_02082	0.49	+0.9
2,180,977	+		MPMX19_02082	0.49	-0.5
2,180,977	+		MPMX19_02082	0.49	-0.3
2,180,978	-		MPMX19_02082	0.49	-0.3
2,180,978	-		MPMX19_02082	0.49	-1.8
2,180,978	-		MPMX19_02082	0.49	-0.3
2,180,978	-		MPMX19_02082	0.49	-0.1
2,180,978	-		MPMX19_02082	0.49	+0.7
2,180,978	-		MPMX19_02082	0.49	+2.0
2,180,978	-		MPMX19_02082	0.49	-1.4
2,180,978	-		MPMX19_02082	0.49	+1.0
2,180,978	-		MPMX19_02082	0.49	-0.4
2,180,978	-		MPMX19_02082	0.49	+0.5
2,180,978	-		MPMX19_02082	0.49	-0.6
2,180,978	-		MPMX19_02082	0.49	-0.0
2,180,978	-		MPMX19_02082	0.49	+0.2
2,180,978	-		MPMX19_02082	0.49	-0.5
2,180,978	-		MPMX19_02082	0.49	-0.8
2,180,978	-		MPMX19_02082	0.49	-0.6
2,180,978	-		MPMX19_02082	0.49	-0.6
2,180,978	-		MPMX19_02082	0.49	+0.1
2,180,978	-		MPMX19_02082	0.49	-1.5
2,180,978	-		MPMX19_02082	0.49	+0.7
2,180,978	-		MPMX19_02082	0.49	-1.3
2,180,978	-		MPMX19_02082	0.49	+2.7
2,180,978	-		MPMX19_02082	0.49	+0.5
2,180,978	-		MPMX19_02082	0.49	-1.6
2,180,978	-		MPMX19_02082	0.49	+0.8
2,180,978	-		MPMX19_02082	0.49	+0.0
2,181,022	+		MPMX19_02082	0.53	-0.9
2,181,022	+		MPMX19_02082	0.53	-0.3
2,181,022	+		MPMX19_02082	0.53	-0.9
2,181,022	+		MPMX19_02082	0.53	-0.3
2,181,022	+		MPMX19_02082	0.53	-1.5
2,181,022	+		MPMX19_02082	0.53	+0.6
2,181,022	+		MPMX19_02082	0.53	+0.5
2,181,023	-		MPMX19_02082	0.53	-1.3
2,181,023	-		MPMX19_02082	0.53	+0.2
2,181,023	-		MPMX19_02082	0.53	-0.6
2,181,023	-		MPMX19_02082	0.53	+0.0
2,181,023	-		MPMX19_02082	0.53	+0.5
2,181,250	+		MPMX19_02082	0.71	-2.2
2,181,251	-		MPMX19_02082	0.71	+0.1
2,181,508	+				-2.2
2,181,508	+				+0.7
2,181,509	-				-1.4
2,181,521	-				-0.7
2,181,521	-				-0.5
2,181,521	-				+0.4
2,181,715	+				-0.0
2,181,715	+				-1.0
2,181,716	-				+2.9
2,181,721	+				-1.3
2,181,721	+				-0.2
2,181,721	+				-2.1
2,181,721	+				+0.1
2,181,721	+				-0.8
2,181,721	+				-0.4
2,181,722	-				+0.9
2,181,722	-				-0.1
2,181,722	-				+0.7
2,181,722	-				+0.5
2,181,722	-				-0.8
2,181,722	-				-1.5
2,182,318	-		MPMX19_02083	0.53	+0.7
2,182,356	+		MPMX19_02083	0.56	-1.8
2,182,356	+		MPMX19_02083	0.56	-1.0