Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02071

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,165,843	+		MPMX19_02070	0.18	+1.0
2,165,844	-		MPMX19_02070	0.18	+0.1
2,165,873	+		MPMX19_02070	0.21	+0.2
2,165,874	-		MPMX19_02070	0.21	+1.7
2,165,945	+		MPMX19_02070	0.28	-0.6
2,165,945	+		MPMX19_02070	0.28	-0.4
2,165,945	+		MPMX19_02070	0.28	-0.5
2,165,945	+		MPMX19_02070	0.28	+0.6
2,165,945	+		MPMX19_02070	0.28	-0.6
2,165,945	+		MPMX19_02070	0.28	-0.5
2,165,945	+		MPMX19_02070	0.28	-1.1
2,165,945	+		MPMX19_02070	0.28	-0.4
2,165,945	+		MPMX19_02070	0.28	-0.8
2,165,945	+		MPMX19_02070	0.28	+0.5
2,165,946	-		MPMX19_02070	0.28	+0.4
2,165,946	-		MPMX19_02070	0.28	-0.2
2,165,946	-		MPMX19_02070	0.28	-1.0
2,165,946	-		MPMX19_02070	0.28	+1.0
2,165,946	-		MPMX19_02070	0.28	-0.9
2,165,946	-		MPMX19_02070	0.28	-0.1
2,165,946	-		MPMX19_02070	0.28	-0.1
2,165,946	-		MPMX19_02070	0.28	+1.3
2,165,946	-		MPMX19_02070	0.28	-0.7
2,165,946	-		MPMX19_02070	0.28	-0.0
2,165,946	-		MPMX19_02070	0.28	-0.2
2,166,037	+		MPMX19_02070	0.37	-0.2
2,166,037	+		MPMX19_02070	0.37	-0.2
2,166,037	+		MPMX19_02070	0.37	-0.5
2,166,037	+		MPMX19_02070	0.37	-0.6
2,166,038	-		MPMX19_02070	0.37	-0.1
2,166,038	-		MPMX19_02070	0.37	+1.7
2,166,071	+		MPMX19_02070	0.40	-0.6
2,166,071	+		MPMX19_02070	0.40	-0.5
2,166,071	+		MPMX19_02070	0.40	-0.3
2,166,071	+		MPMX19_02070	0.40	-0.4
2,166,072	-		MPMX19_02070	0.40	-1.8
2,166,072	-		MPMX19_02070	0.40	-1.3
2,166,072	-		MPMX19_02070	0.40	-0.2
2,166,125	+		MPMX19_02070	0.45	-1.5
2,166,125	+		MPMX19_02070	0.45	-0.8
2,166,126	-		MPMX19_02070	0.45	+2.7
2,166,128	+		MPMX19_02070	0.45	-1.3
2,166,128	+		MPMX19_02070	0.45	-1.5
2,166,128	+		MPMX19_02070	0.45	-1.5
2,166,128	+		MPMX19_02070	0.45	+0.1
2,166,128	+		MPMX19_02070	0.45	-0.8
2,166,128	+		MPMX19_02070	0.45	+0.3
2,166,129	-		MPMX19_02070	0.46	-1.1
2,166,129	-		MPMX19_02070	0.46	-0.5
2,166,129	-		MPMX19_02070	0.46	-1.3
2,166,129	-		MPMX19_02070	0.46	+1.2
2,166,129	-		MPMX19_02070	0.46	+0.8
2,166,143	+		MPMX19_02070	0.47	-0.1
2,166,155	+		MPMX19_02070	0.48	-2.3
2,166,155	+		MPMX19_02070	0.48	+1.0
2,166,155	+		MPMX19_02070	0.48	+0.2
2,166,155	+		MPMX19_02070	0.48	+0.4
2,166,350	+		MPMX19_02070	0.67	-1.1
2,166,350	+		MPMX19_02070	0.67	-0.0
2,166,350	+		MPMX19_02070	0.67	+1.7
2,166,350	+		MPMX19_02070	0.67	-2.1
2,166,350	+		MPMX19_02070	0.67	-1.7
2,166,350	+		MPMX19_02070	0.67	-1.2
2,166,350	+		MPMX19_02070	0.67	-0.4
2,166,350	+		MPMX19_02070	0.67	+0.5
2,166,350	+		MPMX19_02070	0.67	-2.7
2,166,351	-		MPMX19_02070	0.67	+0.9
2,166,351	-		MPMX19_02070	0.67	-1.1
2,166,351	-		MPMX19_02070	0.67	-0.6
2,166,351	-		MPMX19_02070	0.67	+0.7
2,166,351	-		MPMX19_02070	0.67	-0.9
2,166,351	-		MPMX19_02070	0.67	+0.7
2,166,351	-		MPMX19_02070	0.67	-0.3
2,166,351	-		MPMX19_02070	0.67	-0.8
2,166,351	-		MPMX19_02070	0.67	-0.3
2,166,351	-		MPMX19_02070	0.67	-0.9
2,166,351	-		MPMX19_02070	0.67	+0.6
2,166,351	-		MPMX19_02070	0.67	-1.1
2,166,351	-		MPMX19_02070	0.67	-0.6
2,166,351	-		MPMX19_02070	0.67	+0.4
2,166,351	-		MPMX19_02070	0.67	+0.7
2,166,351	-		MPMX19_02070	0.67	-0.8
2,166,352	+		MPMX19_02070	0.67	+0.3
2,166,352	+		MPMX19_02070	0.67	-0.3
2,166,352	+		MPMX19_02070	0.67	-0.2
2,166,352	+		MPMX19_02070	0.67	-0.5
2,166,352	+		MPMX19_02070	0.67	-1.8
2,166,352	+		MPMX19_02070	0.67	+0.5
2,166,352	+		MPMX19_02070	0.67	+1.0
2,166,352	+		MPMX19_02070	0.67	-0.8
2,166,352	+		MPMX19_02070	0.67	-0.2
2,166,353	-		MPMX19_02070	0.67	-2.8
2,166,353	-		MPMX19_02070	0.67	+0.1
2,166,353	-		MPMX19_02070	0.67	+2.0
2,166,408	-		MPMX19_02070	0.73	+0.4
2,166,533	+		MPMX19_02070	0.85	-1.8
2,166,534	-		MPMX19_02070	0.85	+0.0
2,166,534	-		MPMX19_02070	0.85	+1.2
2,166,534	-		MPMX19_02070	0.85	+3.3
2,166,534	-		MPMX19_02070	0.85	-1.1
2,166,596	+				-0.4
2,166,596	+				+0.3
2,166,887	+				+0.8
2,166,887	+				+0.3
2,166,888	-				-0.8
2,167,013	+		MPMX19_02071	0.20	-1.5
2,167,064	+		MPMX19_02071	0.25	+0.3
2,167,065	-		MPMX19_02071	0.25	+0.7
2,167,065	-		MPMX19_02071	0.25	-0.9
2,167,197	-		MPMX19_02071	0.38	-0.3
2,167,211	+		MPMX19_02071	0.39	+2.0
2,167,211	+		MPMX19_02071	0.39	-1.2
2,167,211	+		MPMX19_02071	0.39	-1.5
2,167,211	+		MPMX19_02071	0.39	-1.0
2,167,211	+		MPMX19_02071	0.39	+0.1
2,167,211	+		MPMX19_02071	0.39	+0.7
2,167,211	+		MPMX19_02071	0.39	-1.1
2,167,211	+		MPMX19_02071	0.39	-0.6
2,167,211	+		MPMX19_02071	0.39	-1.6
2,167,211	+		MPMX19_02071	0.39	-1.6
2,167,211	+		MPMX19_02071	0.39	-0.4
2,167,211	+		MPMX19_02071	0.39	-1.2
2,167,212	-		MPMX19_02071	0.39	+0.2
2,167,212	-		MPMX19_02071	0.39	+2.9
2,167,212	-		MPMX19_02071	0.39	-0.5
2,167,212	-		MPMX19_02071	0.39	-1.3
2,167,212	-		MPMX19_02071	0.39	+0.7
2,167,212	-		MPMX19_02071	0.39	+0.8
2,167,212	-		MPMX19_02071	0.39	-0.7
2,167,212	-		MPMX19_02071	0.39	-0.2
2,167,212	-		MPMX19_02071	0.39	-0.9
2,167,212	-		MPMX19_02071	0.39	+1.7
2,167,212	-		MPMX19_02071	0.39	-0.4
2,167,212	-		MPMX19_02071	0.39	-0.3
2,167,212	-		MPMX19_02071	0.39	+0.3
2,167,212	-		MPMX19_02071	0.39	-0.2
2,167,212	-		MPMX19_02071	0.39	+0.1
2,167,212	-		MPMX19_02071	0.39	-1.1
2,167,212	-		MPMX19_02071	0.39	+0.3
2,167,212	-		MPMX19_02071	0.39	-1.6
2,167,212	-		MPMX19_02071	0.39	-1.3
2,167,212	-		MPMX19_02071	0.39	+0.6
2,167,212	-		MPMX19_02071	0.39	+0.8
2,167,212	-		MPMX19_02071	0.39	+0.4
2,167,212	-		MPMX19_02071	0.39	-0.9
2,167,212	-		MPMX19_02071	0.39	-0.5
2,167,256	+		MPMX19_02071	0.43	+1.7
2,167,256	+		MPMX19_02071	0.43	+1.1
2,167,256	+		MPMX19_02071	0.43	-0.8
2,167,257	-		MPMX19_02071	0.43	-0.9
2,167,257	-		MPMX19_02071	0.43	-0.3
2,167,257	-		MPMX19_02071	0.43	-0.6
2,167,257	-		MPMX19_02071	0.43	+0.4
2,167,257	-		MPMX19_02071	0.43	-0.3
2,167,257	-		MPMX19_02071	0.43	-0.2
2,167,257	-		MPMX19_02071	0.43	+1.2
2,167,257	-		MPMX19_02071	0.43	+1.2
2,167,550	+		MPMX19_02071	0.71	-0.6
2,167,550	+		MPMX19_02071	0.71	-0.6
2,167,550	+		MPMX19_02071	0.71	+0.3
2,167,550	+		MPMX19_02071	0.71	-0.4
2,167,550	+		MPMX19_02071	0.71	-0.4
2,167,550	+		MPMX19_02071	0.71	-0.5
2,167,550	+		MPMX19_02071	0.71	-0.7
2,167,550	+		MPMX19_02071	0.71	-0.0
2,167,550	+		MPMX19_02071	0.71	-0.2
2,167,550	+		MPMX19_02071	0.71	-1.2
2,167,551	-		MPMX19_02071	0.71	-1.5
2,167,551	-		MPMX19_02071	0.71	-0.0
2,167,551	-		MPMX19_02071	0.71	-2.0
2,167,551	-		MPMX19_02071	0.71	-0.9
2,167,551	-		MPMX19_02071	0.71	+0.6
2,167,551	-		MPMX19_02071	0.71	-1.5
2,167,551	-		MPMX19_02071	0.71	+0.4
2,167,551	-		MPMX19_02071	0.71	-0.9
2,167,551	-		MPMX19_02071	0.71	-1.0
2,167,551	-		MPMX19_02071	0.71	-1.0
2,167,551	-		MPMX19_02071	0.71	-1.9
2,167,571	+		MPMX19_02071	0.73	-0.3
2,167,571	+		MPMX19_02071	0.73	-2.8
2,167,572	-		MPMX19_02071	0.73	+1.1
2,167,572	-		MPMX19_02071	0.73	+0.1
2,167,572	-		MPMX19_02071	0.73	+0.1
2,167,572	-		MPMX19_02071	0.73	+1.0
2,167,572	-		MPMX19_02071	0.73	-1.3
2,167,572	-		MPMX19_02071	0.73	-1.1
2,167,586	+		MPMX19_02071	0.75	-0.7
2,167,586	+		MPMX19_02071	0.75	-0.8
2,167,586	+		MPMX19_02071	0.75	+0.5
2,167,586	+		MPMX19_02071	0.75	-0.4
2,167,587	-		MPMX19_02071	0.75	-1.1
2,167,793	+				+0.1
2,167,793	+				-2.1
2,167,793	+				-1.6
2,167,793	+				+0.8
2,167,793	+				-0.8
2,167,793	+				-1.1
2,167,793	+				-0.5
2,167,793	+				-0.4
2,167,793	+				-1.9
2,167,793	+				-0.5
2,167,793	+				-0.6
2,167,793	+				-0.6
2,167,793	+				-2.3
2,167,793	+				-0.7
2,167,793	+				-0.5
2,167,793	+				-0.9
2,167,793	+				-0.6
2,167,794	-				-0.5
2,167,794	-				-0.6
2,167,794	-				-0.3
2,167,794	-				+0.5
2,167,794	-				-0.9
2,167,794	-				-0.6
2,167,794	-				+1.2
2,167,794	-				-0.3
2,167,794	-				-0.6
2,167,794	-				+0.1
2,167,794	-				-0.6
2,167,794	-				+0.9
2,167,794	-				+0.1
2,167,794	-				+0.7
2,167,794	-				-2.2
2,167,794	-				-0.3
2,167,794	-				+0.7
2,167,794	-				-0.2
2,167,794	-				+0.7
2,167,794	-				-0.3
2,167,794	-				-1.3
2,167,794	-				+0.5
2,167,794	-				+0.2