Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01969

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,049,933	-				-0.1
2,049,933	-				-1.2
2,050,020	+				+0.0
2,050,181	+				-0.5
2,050,181	+				-1.5
2,050,181	+				-2.9
2,050,181	+				-1.5
2,050,181	+				-0.5
2,050,181	+				-1.1
2,050,181	+				+0.0
2,050,181	+				+0.4
2,050,181	+				+0.0
2,050,181	+				-1.5
2,050,181	+				-1.3
2,050,181	+				-0.1
2,050,181	+				-1.1
2,050,181	+				+1.6
2,050,181	+				+0.0
2,050,181	+				-0.6
2,050,181	+				+0.8
2,050,181	+				-1.2
2,050,181	+				-0.2
2,050,181	+				-0.2
2,050,181	+				-0.5
2,050,181	+				-2.0
2,050,181	+				+0.0
2,050,181	+				-0.6
2,050,181	+				-0.7
2,050,182	-				-1.0
2,050,182	-				-1.0
2,050,182	-				-0.8
2,050,182	-				-0.1
2,050,182	-				-2.1
2,050,182	-				+0.0
2,050,182	-				+0.5
2,050,182	-				-0.7
2,050,182	-				+0.0
2,050,182	-				-1.0
2,050,182	-				-0.5
2,050,182	-				-2.8
2,050,182	-				-0.6
2,050,182	-				-1.4
2,050,271	+		MPMX19_01968	0.23	-0.4
2,050,271	+		MPMX19_01968	0.23	-1.2
2,050,271	+		MPMX19_01968	0.23	-1.2
2,050,271	+		MPMX19_01968	0.23	-1.0
2,050,271	+		MPMX19_01968	0.23	-0.7
2,050,271	+		MPMX19_01968	0.23	-0.4
2,050,271	+		MPMX19_01968	0.23	-1.1
2,050,272	-		MPMX19_01968	0.23	-0.5
2,050,272	-		MPMX19_01968	0.23	+0.9
2,050,272	-		MPMX19_01968	0.23	-1.2
2,050,272	-		MPMX19_01968	0.23	-0.7
2,050,272	-		MPMX19_01968	0.23	+0.0
2,050,272	-		MPMX19_01968	0.23	-1.2
2,050,272	-		MPMX19_01968	0.23	-0.9
2,050,272	-		MPMX19_01968	0.23	-1.2
2,050,272	-		MPMX19_01968	0.23	+0.3
2,050,273	+		MPMX19_01968	0.23	-0.5
2,050,273	+		MPMX19_01968	0.23	-2.0
2,050,273	+		MPMX19_01968	0.23	+0.3
2,050,273	+		MPMX19_01968	0.23	-0.6
2,050,273	+		MPMX19_01968	0.23	+1.0
2,050,273	+		MPMX19_01968	0.23	+0.2
2,050,274	-		MPMX19_01968	0.23	+0.6
2,050,274	-		MPMX19_01968	0.23	-0.5
2,050,274	-		MPMX19_01968	0.23	+0.0
2,050,274	-		MPMX19_01968	0.23	+1.6
2,050,274	-		MPMX19_01968	0.23	-1.0
2,050,274	-		MPMX19_01968	0.23	+0.0
2,050,274	-		MPMX19_01968	0.23	-1.3
2,050,281	-		MPMX19_01968	0.24	-1.2
2,050,281	-		MPMX19_01968	0.24	-0.0
2,050,281	-		MPMX19_01968	0.24	+0.2
2,050,281	-		MPMX19_01968	0.24	+0.6
2,050,373	+		MPMX19_01968	0.39	-1.4
2,050,373	+		MPMX19_01968	0.39	+0.6
2,050,374	-		MPMX19_01968	0.40	+0.4
2,050,374	-		MPMX19_01968	0.40	-0.2
2,050,394	+		MPMX19_01968	0.43	-1.3
2,050,394	+		MPMX19_01968	0.43	-0.7
2,050,395	-		MPMX19_01968	0.43	+0.2
2,050,395	-		MPMX19_01968	0.43	+1.4
2,050,395	-		MPMX19_01968	0.43	-0.2
2,050,395	-		MPMX19_01968	0.43	-0.2
2,050,395	-		MPMX19_01968	0.43	+0.3
2,050,396	+		MPMX19_01968	0.43	-0.2
2,050,396	+		MPMX19_01968	0.43	+0.9
2,050,396	+		MPMX19_01968	0.43	+1.4
2,050,396	+		MPMX19_01968	0.43	+0.4
2,050,396	+		MPMX19_01968	0.43	+1.2
2,050,396	+		MPMX19_01968	0.43	-1.0
2,050,396	+		MPMX19_01968	0.43	-0.0
2,050,396	+		MPMX19_01968	0.43	-1.2
2,050,396	+		MPMX19_01968	0.43	-1.5
2,050,396	+		MPMX19_01968	0.43	-0.4
2,050,396	+		MPMX19_01968	0.43	+1.6
2,050,396	+		MPMX19_01968	0.43	+0.2
2,050,396	+		MPMX19_01968	0.43	+0.0
2,050,396	+		MPMX19_01968	0.43	-0.1
2,050,396	+		MPMX19_01968	0.43	-0.9
2,050,397	-		MPMX19_01968	0.43	+2.0
2,050,397	-		MPMX19_01968	0.43	-2.0
2,050,397	-		MPMX19_01968	0.43	-0.3
2,050,397	-		MPMX19_01968	0.43	-0.2
2,050,397	-		MPMX19_01968	0.43	-0.3
2,050,397	-		MPMX19_01968	0.43	-1.8
2,050,397	-		MPMX19_01968	0.43	-0.7
2,050,397	-		MPMX19_01968	0.43	-2.2
2,050,397	-		MPMX19_01968	0.43	-0.4
2,050,490	+		MPMX19_01968	0.59	-1.2
2,050,490	+		MPMX19_01968	0.59	-0.7
2,050,490	+		MPMX19_01968	0.59	-0.3
2,050,490	+		MPMX19_01968	0.59	-0.4
2,050,490	+		MPMX19_01968	0.59	+0.8
2,050,490	+		MPMX19_01968	0.59	+0.7
2,050,490	+		MPMX19_01968	0.59	+1.0
2,050,490	+		MPMX19_01968	0.59	+0.5
2,050,490	+		MPMX19_01968	0.59	-1.8
2,050,490	+		MPMX19_01968	0.59	-0.3
2,050,491	-		MPMX19_01968	0.59	-1.0
2,050,491	-		MPMX19_01968	0.59	+0.3
2,050,491	-		MPMX19_01968	0.59	-0.7
2,050,491	-		MPMX19_01968	0.59	-0.3
2,050,491	-		MPMX19_01968	0.59	-0.7
2,050,491	-		MPMX19_01968	0.59	+1.6
2,050,491	-		MPMX19_01968	0.59	+0.4
2,050,491	-		MPMX19_01968	0.59	+0.5
2,050,491	-		MPMX19_01968	0.59	+0.7
2,050,491	-		MPMX19_01968	0.59	+1.4
2,050,491	-		MPMX19_01968	0.59	-0.5
2,050,491	-		MPMX19_01968	0.59	+0.0
2,050,491	-		MPMX19_01968	0.59	+0.8
2,050,491	-		MPMX19_01968	0.59	-1.2
2,050,491	-		MPMX19_01968	0.59	-0.5
2,050,491	-		MPMX19_01968	0.59	-0.2
2,050,491	-		MPMX19_01968	0.59	-1.0
2,050,491	-		MPMX19_01968	0.59	-0.1
2,050,739	+				-0.7
2,050,739	+				+0.9
2,050,739	+				-0.5
2,050,739	+				-0.3
2,050,739	+				-0.3
2,050,739	+				-0.6
2,050,739	+				-0.5
2,050,739	+				-0.2
2,050,739	+				+1.2
2,050,739	+				-0.6
2,050,739	+				-1.1
2,050,739	+				-1.2
2,050,739	+				+1.0
2,050,739	+				-1.0
2,050,739	+				-0.3
2,050,740	-				-1.3
2,050,740	-				+0.0
2,050,740	-				-0.7
2,050,740	-				-1.0
2,050,740	-				+1.6
2,050,740	-				-0.3
2,050,740	-				-1.4
2,050,740	-				+0.0
2,050,740	-				+0.5
2,050,740	-				-1.6
2,050,740	-				-1.0
2,050,740	-				-0.1
2,050,740	-				-1.0
2,050,740	-				-0.9
2,050,740	-				+0.6
2,050,740	-				-1.5
2,050,936	+		MPMX19_01969	0.15	-1.5
2,050,936	+		MPMX19_01969	0.15	-0.8
2,050,936	+		MPMX19_01969	0.15	-1.2
2,050,936	+		MPMX19_01969	0.15	-1.3
2,050,936	+		MPMX19_01969	0.15	-0.4
2,050,936	+		MPMX19_01969	0.15	-0.7
2,050,936	+		MPMX19_01969	0.15	+1.2
2,050,936	+		MPMX19_01969	0.15	+0.5
2,050,936	+		MPMX19_01969	0.15	+0.3
2,050,936	+		MPMX19_01969	0.15	-0.6
2,050,936	+		MPMX19_01969	0.15	+0.0
2,050,937	-		MPMX19_01969	0.15	+0.0
2,050,937	-		MPMX19_01969	0.15	-1.6
2,050,937	-		MPMX19_01969	0.15	+0.2
2,050,937	-		MPMX19_01969	0.15	-0.5
2,050,937	-		MPMX19_01969	0.15	+0.0
2,050,937	-		MPMX19_01969	0.15	-0.8
2,050,937	-		MPMX19_01969	0.15	-0.6
2,051,152	+		MPMX19_01969	0.33	-1.0
2,051,152	+		MPMX19_01969	0.33	+2.0
2,051,152	+		MPMX19_01969	0.33	-1.8
2,051,152	+		MPMX19_01969	0.33	+0.0
2,051,152	+		MPMX19_01969	0.33	+0.6
2,051,152	+		MPMX19_01969	0.33	-1.2
2,051,152	+		MPMX19_01969	0.33	-0.7
2,051,152	+		MPMX19_01969	0.33	+1.0
2,051,153	-		MPMX19_01969	0.33	+0.2
2,051,153	-		MPMX19_01969	0.33	-1.2
2,051,153	-		MPMX19_01969	0.33	+0.0
2,051,153	-		MPMX19_01969	0.33	-1.7
2,051,153	-		MPMX19_01969	0.33	-0.6
2,051,153	-		MPMX19_01969	0.33	-0.6
2,051,153	-		MPMX19_01969	0.33	+0.3
2,051,153	-		MPMX19_01969	0.33	+0.2
2,051,153	-		MPMX19_01969	0.33	+0.4
2,051,153	-		MPMX19_01969	0.33	-1.2
2,051,153	-		MPMX19_01969	0.33	-0.2
2,051,393	+		MPMX19_01969	0.52	-0.5
2,051,552	+		MPMX19_01969	0.65	-1.1
2,051,552	+		MPMX19_01969	0.65	+0.3
2,051,553	-		MPMX19_01969	0.65	+0.2
2,051,553	-		MPMX19_01969	0.65	-1.1
2,051,553	-		MPMX19_01969	0.65	-1.0
2,051,553	-		MPMX19_01969	0.65	-0.6
2,051,950	+				-1.5
2,051,950	+				-0.7
2,051,950	+				+0.3
2,052,081	+				-0.4
2,052,081	+				-1.0
2,052,082	-				-0.2
2,052,082	-				-2.3
2,052,082	-				+0.4
2,052,082	-				-1.0
2,052,125	+				-1.5
2,052,125	+				-0.0
2,052,125	+				+0.3
2,052,125	+				+0.2
2,052,125	+				-0.3
2,052,125	+				-0.5
2,052,125	+				-0.8
2,052,125	+				-1.0
2,052,125	+				+0.6
2,052,126	-				-0.8
2,052,126	-				-1.9
2,052,126	-				-0.4
2,052,126	-				-1.2
2,052,126	-				+0.0
2,052,126	-				+0.5
2,052,126	-				-0.6
2,052,126	-				-2.3
2,052,126	-				+0.5
2,052,126	-				+0.3
2,052,126	-				+0.5
2,052,157	+				-0.8
2,052,157	+				-1.0
2,052,157	+				-0.4
2,052,158	-				-0.2
2,052,158	-				-0.0
2,052,158	-				+0.9
2,052,753	+		MPMX19_01970	0.63	-0.3
2,052,753	+		MPMX19_01970	0.63	-2.1
2,052,753	+		MPMX19_01970	0.63	-1.0
2,052,753	+		MPMX19_01970	0.63	-2.2
2,052,753	+		MPMX19_01970	0.63	-1.0
2,052,753	+		MPMX19_01970	0.63	+0.9
2,052,754	-		MPMX19_01970	0.63	-0.1
2,052,754	-		MPMX19_01970	0.63	-1.1
2,052,754	-		MPMX19_01970	0.63	-0.5
2,052,879	+		MPMX19_01970	0.80	+0.0
2,052,879	+		MPMX19_01970	0.80	-0.3
2,052,879	+		MPMX19_01970	0.80	-0.0
2,052,880	-		MPMX19_01970	0.80	-0.9
2,052,880	-		MPMX19_01970	0.80	+0.2
2,052,880	-		MPMX19_01970	0.80	-1.7
2,052,880	-		MPMX19_01970	0.80	-0.1
2,052,880	-		MPMX19_01970	0.80	+0.6
2,052,880	-		MPMX19_01970	0.80	-2.2
2,052,880	-		MPMX19_01970	0.80	+0.4
2,052,880	-		MPMX19_01970	0.80	+0.3
2,052,880	-		MPMX19_01970	0.80	-0.4
2,052,880	-		MPMX19_01970	0.80	-1.4
2,052,880	-		MPMX19_01970	0.80	+0.1
2,052,951	+		MPMX19_01970	0.90	-0.4
2,052,951	+		MPMX19_01970	0.90	-0.4
2,052,951	+		MPMX19_01970	0.90	-0.7
2,052,951	+		MPMX19_01970	0.90	-1.6
2,052,952	-				+0.5
2,052,952	-				+1.9
2,052,952	-				+1.3
2,052,952	-				-0.9
2,052,952	-				-0.5
2,052,952	-				-0.3
2,052,952	-				+0.4
2,052,975	+				-0.1
2,052,975	+				-0.5
2,052,975	+				-0.4
2,052,975	+				-0.4
2,052,975	+				+0.0
2,052,975	+				-0.5
2,052,975	+				-0.2
2,052,975	+				-0.7
2,052,975	+				+0.5
2,052,975	+				+0.1
2,052,975	+				-1.1
2,052,975	+				+0.3
2,052,975	+				-0.2
2,052,975	+				+0.1
2,052,975	+				-1.5
2,052,976	-				+0.6
2,052,976	-				-0.1
2,052,976	-				-2.1
2,052,976	-				-0.8
2,052,976	-				-1.7
2,052,976	-				+1.2
2,052,976	-				-0.7
2,052,976	-				-0.7
2,052,976	-				-0.6
2,052,976	-				-0.6
2,052,976	-				-1.7
2,052,976	-				+1.0
2,052,976	-				+0.2
2,052,976	-				-0.2
2,052,976	-				-1.4