Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01960

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,042,242	+				-1.4
2,042,242	+				-0.1
2,042,242	+				-0.4
2,042,242	+				-1.0
2,042,242	+				-0.5
2,042,243	-				-0.1
2,042,243	-				-0.4
2,042,243	-				+0.6
2,042,243	-				-0.8
2,042,243	-				+0.0
2,042,243	-				+0.0
2,042,260	+				-0.1
2,042,260	+				+1.4
2,042,260	+				-1.2
2,042,261	-				-1.3
2,042,261	-				+0.1
2,042,499	+		MPMX19_01960	0.14	-2.1
2,042,499	+		MPMX19_01960	0.14	-0.8
2,042,499	+		MPMX19_01960	0.14	-1.3
2,042,499	+		MPMX19_01960	0.14	-0.6
2,042,499	+		MPMX19_01960	0.14	-1.0
2,042,499	+		MPMX19_01960	0.14	+0.0
2,042,499	+		MPMX19_01960	0.14	+0.3
2,042,499	+		MPMX19_01960	0.14	-0.2
2,042,499	+		MPMX19_01960	0.14	-1.4
2,042,499	+		MPMX19_01960	0.14	-1.6
2,042,499	+		MPMX19_01960	0.14	-0.9
2,042,499	+		MPMX19_01960	0.14	-1.4
2,042,499	+		MPMX19_01960	0.14	-0.7
2,042,499	+		MPMX19_01960	0.14	-0.5
2,042,499	+		MPMX19_01960	0.14	+0.6
2,042,499	+		MPMX19_01960	0.14	-1.5
2,042,499	+		MPMX19_01960	0.14	-0.4
2,042,499	+		MPMX19_01960	0.14	-1.0
2,042,499	+		MPMX19_01960	0.14	-1.2
2,042,499	+		MPMX19_01960	0.14	-1.0
2,042,499	+		MPMX19_01960	0.14	-0.5
2,042,499	+		MPMX19_01960	0.14	-0.7
2,042,499	+		MPMX19_01960	0.14	+0.0
2,042,499	+		MPMX19_01960	0.14	-0.9
2,042,499	+		MPMX19_01960	0.14	-0.8
2,042,499	+		MPMX19_01960	0.14	-2.1
2,042,499	+		MPMX19_01960	0.14	-0.4
2,042,499	+		MPMX19_01960	0.14	-0.7
2,042,499	+		MPMX19_01960	0.14	-1.5
2,042,499	+		MPMX19_01960	0.14	-0.8
2,042,499	+		MPMX19_01960	0.14	-0.7
2,042,499	+		MPMX19_01960	0.14	-1.5
2,042,499	+		MPMX19_01960	0.14	+0.7
2,042,499	+		MPMX19_01960	0.14	+1.5
2,042,499	+		MPMX19_01960	0.14	-1.3
2,042,500	-		MPMX19_01960	0.14	-0.4
2,042,500	-		MPMX19_01960	0.14	+0.4
2,042,500	-		MPMX19_01960	0.14	-0.7
2,042,500	-		MPMX19_01960	0.14	-0.8
2,042,500	-		MPMX19_01960	0.14	+0.2
2,042,500	-		MPMX19_01960	0.14	-1.1
2,042,500	-		MPMX19_01960	0.14	-1.2
2,042,500	-		MPMX19_01960	0.14	-0.5
2,042,500	-		MPMX19_01960	0.14	-0.1
2,042,500	-		MPMX19_01960	0.14	+1.0
2,042,500	-		MPMX19_01960	0.14	+0.6
2,042,500	-		MPMX19_01960	0.14	-1.6
2,042,500	-		MPMX19_01960	0.14	-0.3
2,042,500	-		MPMX19_01960	0.14	+0.5
2,042,500	-		MPMX19_01960	0.14	+0.0
2,042,500	-		MPMX19_01960	0.14	-0.3
2,042,500	-		MPMX19_01960	0.14	-2.1
2,042,500	-		MPMX19_01960	0.14	-1.8
2,042,500	-		MPMX19_01960	0.14	-2.4
2,042,500	-		MPMX19_01960	0.14	-0.9
2,042,500	-		MPMX19_01960	0.14	-0.6
2,042,500	-		MPMX19_01960	0.14	-0.4
2,042,500	-		MPMX19_01960	0.14	+0.8
2,042,500	-		MPMX19_01960	0.14	+0.8
2,042,500	-		MPMX19_01960	0.14	-0.5
2,042,500	-		MPMX19_01960	0.14	-0.2
2,042,500	-		MPMX19_01960	0.14	-0.2
2,042,500	-		MPMX19_01960	0.14	+0.0
2,042,500	-		MPMX19_01960	0.14	-0.6
2,042,500	-		MPMX19_01960	0.14	-1.2
2,042,500	-		MPMX19_01960	0.14	-0.2
2,042,500	-		MPMX19_01960	0.14	-2.1
2,042,500	-		MPMX19_01960	0.14	+0.2
2,042,500	-		MPMX19_01960	0.14	-0.1
2,042,500	-		MPMX19_01960	0.14	-0.6
2,042,500	-		MPMX19_01960	0.14	-1.7
2,042,500	-		MPMX19_01960	0.14	+0.0
2,042,502	+		MPMX19_01960	0.14	+0.3
2,042,502	+		MPMX19_01960	0.14	+0.0
2,042,502	+		MPMX19_01960	0.14	-0.1
2,042,556	+		MPMX19_01960	0.19	-2.3
2,042,556	+		MPMX19_01960	0.19	-0.2
2,042,556	+		MPMX19_01960	0.19	+0.6
2,042,556	+		MPMX19_01960	0.19	-0.4
2,042,557	-		MPMX19_01960	0.19	+0.2
2,042,557	-		MPMX19_01960	0.19	-0.4
2,042,557	-		MPMX19_01960	0.19	-0.6
2,042,557	-		MPMX19_01960	0.19	-0.2
2,042,557	-		MPMX19_01960	0.19	+0.4
2,042,557	-		MPMX19_01960	0.19	+1.6
2,042,562	+		MPMX19_01960	0.19	-0.6
2,042,562	+		MPMX19_01960	0.19	+0.7
2,042,562	+		MPMX19_01960	0.19	-0.5
2,042,562	+		MPMX19_01960	0.19	-0.5
2,042,562	+		MPMX19_01960	0.19	-0.6
2,042,562	+		MPMX19_01960	0.19	+0.9
2,042,563	-		MPMX19_01960	0.19	+0.1
2,042,563	-		MPMX19_01960	0.19	-2.1
2,042,563	-		MPMX19_01960	0.19	+0.8
2,042,563	-		MPMX19_01960	0.19	-0.4
2,042,563	-		MPMX19_01960	0.19	-2.2
2,042,563	-		MPMX19_01960	0.19	+0.6
2,042,563	-		MPMX19_01960	0.19	-0.8
2,042,563	-		MPMX19_01960	0.19	-0.5
2,042,563	-		MPMX19_01960	0.19	-0.2
2,042,563	-		MPMX19_01960	0.19	-1.7
2,043,039	+		MPMX19_01960	0.60	+1.2
2,043,039	+		MPMX19_01960	0.60	+0.3
2,043,039	+		MPMX19_01960	0.60	+0.5
2,043,039	+		MPMX19_01960	0.60	-2.2
2,043,039	+		MPMX19_01960	0.60	-0.8
2,043,039	+		MPMX19_01960	0.60	+0.1
2,043,039	+		MPMX19_01960	0.60	-0.3
2,043,039	+		MPMX19_01960	0.60	-0.6
2,043,039	+		MPMX19_01960	0.60	+0.4
2,043,039	+		MPMX19_01960	0.60	+0.4
2,043,039	+		MPMX19_01960	0.60	-1.5
2,043,039	+		MPMX19_01960	0.60	+1.0
2,043,039	+		MPMX19_01960	0.60	-0.2
2,043,039	+		MPMX19_01960	0.60	-1.1
2,043,039	+		MPMX19_01960	0.60	-1.7
2,043,039	+		MPMX19_01960	0.60	-0.7
2,043,039	+		MPMX19_01960	0.60	-0.8
2,043,039	+		MPMX19_01960	0.60	-1.8
2,043,039	+		MPMX19_01960	0.60	-2.0
2,043,039	+		MPMX19_01960	0.60	+0.4
2,043,039	+		MPMX19_01960	0.60	-0.8
2,043,039	+		MPMX19_01960	0.60	-1.0
2,043,039	+		MPMX19_01960	0.60	+0.2
2,043,039	+		MPMX19_01960	0.60	+0.6
2,043,039	+		MPMX19_01960	0.60	-0.1
2,043,039	+		MPMX19_01960	0.60	+0.2
2,043,039	+		MPMX19_01960	0.60	+0.6
2,043,039	+		MPMX19_01960	0.60	-0.4
2,043,039	+		MPMX19_01960	0.60	-1.5
2,043,039	+		MPMX19_01960	0.60	-0.4
2,043,039	+		MPMX19_01960	0.60	-0.5
2,043,039	+		MPMX19_01960	0.60	-1.0
2,043,039	+		MPMX19_01960	0.60	+1.1
2,043,039	+		MPMX19_01960	0.60	-0.4
2,043,039	+		MPMX19_01960	0.60	-1.4
2,043,039	+		MPMX19_01960	0.60	-0.8
2,043,039	+		MPMX19_01960	0.60	-1.2
2,043,039	+		MPMX19_01960	0.60	+0.5
2,043,039	+		MPMX19_01960	0.60	-0.8
2,043,039	+		MPMX19_01960	0.60	-0.3
2,043,039	+		MPMX19_01960	0.60	+1.0
2,043,039	+		MPMX19_01960	0.60	+0.8
2,043,039	+		MPMX19_01960	0.60	-1.7
2,043,039	+		MPMX19_01960	0.60	-1.0
2,043,039	+		MPMX19_01960	0.60	+0.0
2,043,039	+		MPMX19_01960	0.60	-2.3
2,043,039	+		MPMX19_01960	0.60	+0.2
2,043,039	+		MPMX19_01960	0.60	+0.3
2,043,039	+		MPMX19_01960	0.60	-0.1
2,043,039	+		MPMX19_01960	0.60	-0.8
2,043,040	-		MPMX19_01960	0.60	+1.5
2,043,040	-		MPMX19_01960	0.60	-0.1
2,043,040	-		MPMX19_01960	0.60	-0.5
2,043,040	-		MPMX19_01960	0.60	-0.4
2,043,040	-		MPMX19_01960	0.60	-1.1
2,043,040	-		MPMX19_01960	0.60	-0.4
2,043,040	-		MPMX19_01960	0.60	-2.5
2,043,040	-		MPMX19_01960	0.60	-1.1
2,043,040	-		MPMX19_01960	0.60	-0.7
2,043,040	-		MPMX19_01960	0.60	-1.4
2,043,040	-		MPMX19_01960	0.60	-1.4
2,043,040	-		MPMX19_01960	0.60	+1.4
2,043,040	-		MPMX19_01960	0.60	+0.3
2,043,040	-		MPMX19_01960	0.60	-2.5
2,043,040	-		MPMX19_01960	0.60	-0.5
2,043,040	-		MPMX19_01960	0.60	-1.4
2,043,040	-		MPMX19_01960	0.60	-1.1
2,043,040	-		MPMX19_01960	0.60	-1.0
2,043,040	-		MPMX19_01960	0.60	+0.6
2,043,040	-		MPMX19_01960	0.60	-0.2
2,043,040	-		MPMX19_01960	0.60	+0.8
2,043,040	-		MPMX19_01960	0.60	+0.8
2,043,040	-		MPMX19_01960	0.60	+0.0
2,043,040	-		MPMX19_01960	0.60	+0.4
2,043,040	-		MPMX19_01960	0.60	+0.4
2,043,040	-		MPMX19_01960	0.60	-0.2
2,043,040	-		MPMX19_01960	0.60	-1.2
2,043,040	-		MPMX19_01960	0.60	-1.7
2,043,040	-		MPMX19_01960	0.60	+0.8
2,043,040	-		MPMX19_01960	0.60	-0.2
2,043,040	-		MPMX19_01960	0.60	-0.4
2,043,040	-		MPMX19_01960	0.60	-1.2
2,043,040	-		MPMX19_01960	0.60	-0.7
2,043,040	-		MPMX19_01960	0.60	-1.6
2,043,040	-		MPMX19_01960	0.60	-0.7
2,043,040	-		MPMX19_01960	0.60	-1.5
2,043,040	-		MPMX19_01960	0.60	+0.1
2,043,040	-		MPMX19_01960	0.60	-1.4
2,043,040	-		MPMX19_01960	0.60	-1.4
2,043,040	-		MPMX19_01960	0.60	-0.6
2,043,042	+		MPMX19_01960	0.60	-0.1
2,043,042	+		MPMX19_01960	0.60	+0.2
2,043,042	+		MPMX19_01960	0.60	-1.6
2,043,042	+		MPMX19_01960	0.60	-1.0
2,043,042	+		MPMX19_01960	0.60	-0.4
2,043,042	+		MPMX19_01960	0.60	-0.2
2,043,042	+		MPMX19_01960	0.60	-2.7
2,043,042	+		MPMX19_01960	0.60	+0.0
2,043,042	+		MPMX19_01960	0.60	-1.5
2,043,043	-		MPMX19_01960	0.60	+1.1
2,043,043	-		MPMX19_01960	0.60	+1.0
2,043,043	-		MPMX19_01960	0.60	-0.1
2,043,043	-		MPMX19_01960	0.60	+0.4
2,043,043	-		MPMX19_01960	0.60	+0.3
2,043,084	+		MPMX19_01960	0.64	-0.9
2,043,084	+		MPMX19_01960	0.64	-0.7
2,043,084	+		MPMX19_01960	0.64	-0.8
2,043,085	-		MPMX19_01960	0.64	+0.9
2,043,085	-		MPMX19_01960	0.64	-2.2
2,043,198	+		MPMX19_01960	0.74	+0.4
2,043,198	+		MPMX19_01960	0.74	-0.5
2,043,198	+		MPMX19_01960	0.74	-0.9
2,043,198	+		MPMX19_01960	0.74	+0.4
2,043,198	+		MPMX19_01960	0.74	-1.0
2,043,198	+		MPMX19_01960	0.74	+0.8
2,043,198	+		MPMX19_01960	0.74	+0.1
2,043,198	+		MPMX19_01960	0.74	+0.0
2,043,198	+		MPMX19_01960	0.74	+0.9
2,043,198	+		MPMX19_01960	0.74	-0.9
2,043,198	+		MPMX19_01960	0.74	+1.0
2,043,198	+		MPMX19_01960	0.74	-0.8
2,043,198	+		MPMX19_01960	0.74	-1.5
2,043,198	+		MPMX19_01960	0.74	-0.0
2,043,198	+		MPMX19_01960	0.74	-0.5
2,043,199	-		MPMX19_01960	0.74	+0.4
2,043,199	-		MPMX19_01960	0.74	-0.7
2,043,199	-		MPMX19_01960	0.74	-0.1
2,043,199	-		MPMX19_01960	0.74	+0.6
2,043,199	-		MPMX19_01960	0.74	-1.8
2,043,199	-		MPMX19_01960	0.74	-0.9
2,043,199	-		MPMX19_01960	0.74	+0.0
2,043,199	-		MPMX19_01960	0.74	-0.5
2,043,199	-		MPMX19_01960	0.74	-0.6
2,043,200	+		MPMX19_01960	0.74	-2.1
2,043,200	+		MPMX19_01960	0.74	-0.5
2,043,201	-		MPMX19_01960	0.74	+0.5
2,043,201	-		MPMX19_01960	0.74	-0.5
2,043,201	-		MPMX19_01960	0.74	+0.5
2,043,201	-		MPMX19_01960	0.74	-0.8
2,043,231	+		MPMX19_01960	0.76	-1.5
2,043,231	+		MPMX19_01960	0.76	-0.9
2,043,231	+		MPMX19_01960	0.76	+0.1
2,043,231	+		MPMX19_01960	0.76	-1.2
2,043,231	+		MPMX19_01960	0.76	+0.0
2,043,231	+		MPMX19_01960	0.76	+0.2
2,043,231	+		MPMX19_01960	0.76	+1.9
2,043,231	+		MPMX19_01960	0.76	-1.9
2,043,231	+		MPMX19_01960	0.76	-0.7
2,043,231	+		MPMX19_01960	0.76	+1.0
2,043,231	+		MPMX19_01960	0.76	-0.0
2,043,232	-		MPMX19_01960	0.76	-0.1
2,043,232	-		MPMX19_01960	0.76	+0.2
2,043,232	-		MPMX19_01960	0.76	-0.5
2,043,232	-		MPMX19_01960	0.76	+0.2
2,043,232	-		MPMX19_01960	0.76	-0.9
2,043,232	-		MPMX19_01960	0.76	-0.8
2,043,232	-		MPMX19_01960	0.76	-0.1
2,043,232	-		MPMX19_01960	0.76	+0.4
2,043,232	-		MPMX19_01960	0.76	-0.8
2,043,249	+		MPMX19_01960	0.78	-1.5
2,043,249	+		MPMX19_01960	0.78	+0.9
2,043,249	+		MPMX19_01960	0.78	+0.9
2,043,249	+		MPMX19_01960	0.78	-1.4
2,043,249	+		MPMX19_01960	0.78	-1.8
2,043,249	+		MPMX19_01960	0.78	-1.5
2,043,249	+		MPMX19_01960	0.78	-0.8
2,043,249	+		MPMX19_01960	0.78	+0.2
2,043,249	+		MPMX19_01960	0.78	-0.4
2,043,249	+		MPMX19_01960	0.78	-0.3
2,043,249	+		MPMX19_01960	0.78	+1.0
2,043,249	+		MPMX19_01960	0.78	-1.7
2,043,250	-		MPMX19_01960	0.78	+0.8
2,043,250	-		MPMX19_01960	0.78	-1.5
2,043,250	-		MPMX19_01960	0.78	+0.0
2,043,250	-		MPMX19_01960	0.78	-1.0
2,043,250	-		MPMX19_01960	0.78	-0.2
2,043,250	-		MPMX19_01960	0.78	-0.3
2,043,250	-		MPMX19_01960	0.78	+0.2
2,043,250	-		MPMX19_01960	0.78	+0.5
2,043,250	-		MPMX19_01960	0.78	-0.4
2,043,250	-		MPMX19_01960	0.78	+1.6
2,043,281	-		MPMX19_01960	0.81	-0.5
2,043,288	+		MPMX19_01960	0.81	-1.1
2,043,288	+		MPMX19_01960	0.81	-1.5
2,043,288	+		MPMX19_01960	0.81	+1.0
2,043,288	+		MPMX19_01960	0.81	-0.9
2,043,289	-		MPMX19_01960	0.81	-2.1
2,043,289	-		MPMX19_01960	0.81	-0.8
2,043,289	-		MPMX19_01960	0.81	-1.3
2,043,476	+				-0.7
2,043,477	-				+0.5
2,043,530	+				+1.0
2,043,530	+				+1.6
2,043,530	+				-2.0
2,043,530	+				-1.5
2,043,530	+				-0.2
2,043,530	+				-0.4
2,043,530	+				-0.9
2,043,530	+				-1.4
2,043,530	+				-1.5
2,043,530	+				-1.4
2,043,530	+				+0.3
2,043,530	+				+0.6
2,043,530	+				+0.5
2,043,530	+				-0.5
2,043,530	+				+1.6
2,043,531	-				-0.5
2,043,531	-				-0.4
2,043,531	-				-0.6
2,043,531	-				-1.5
2,043,531	-				-0.7
2,043,531	-				+0.2
2,043,531	-				-1.7
2,043,531	-				-0.4
2,043,532	+				-1.8
2,043,532	+				-0.2
2,043,533	-				-1.7
2,043,533	-				-0.6
2,043,533	-				-1.0
2,043,740	+		MPMX19_01961	0.23	+0.3
2,043,740	+		MPMX19_01961	0.23	-1.0
2,043,740	+		MPMX19_01961	0.23	-2.9
2,043,741	-		MPMX19_01961	0.23	+0.1
2,043,741	-		MPMX19_01961	0.23	+0.1
2,043,741	-		MPMX19_01961	0.23	-1.7
2,043,741	-		MPMX19_01961	0.23	+0.0
2,043,881	+		MPMX19_01961	0.52	-0.4
2,043,882	-		MPMX19_01961	0.52	+0.6
2,043,882	-		MPMX19_01961	0.52	-0.7
2,043,882	-		MPMX19_01961	0.52	+0.1
2,043,882	-		MPMX19_01961	0.52	-0.3
2,044,135	+				-0.1
2,044,135	+				-0.3
2,044,135	+				-0.4
2,044,136	-				-1.2
2,044,136	-				+0.5
2,044,136	-				+0.0
2,044,151	-				+0.1
2,044,151	-				+0.0
2,044,151	-				+0.0
2,044,151	-				+0.0
2,044,151	-				-0.8
2,044,279	+		MPMX19_01962	0.35	+0.1
2,044,279	+		MPMX19_01962	0.35	-2.0
2,044,279	+		MPMX19_01962	0.35	-2.3
2,044,279	+		MPMX19_01962	0.35	+0.4
2,044,279	+		MPMX19_01962	0.35	-0.1
2,044,279	+		MPMX19_01962	0.35	-0.9
2,044,279	+		MPMX19_01962	0.35	-1.2
2,044,279	+		MPMX19_01962	0.35	-0.2
2,044,279	+		MPMX19_01962	0.35	+0.7
2,044,279	+		MPMX19_01962	0.35	-1.0
2,044,279	+		MPMX19_01962	0.35	-1.4
2,044,279	+		MPMX19_01962	0.35	+0.2
2,044,279	+		MPMX19_01962	0.35	-1.2
2,044,279	+		MPMX19_01962	0.35	-0.6
2,044,279	+		MPMX19_01962	0.35	-0.4
2,044,279	+		MPMX19_01962	0.35	-1.2
2,044,280	-		MPMX19_01962	0.36	-0.5
2,044,280	-		MPMX19_01962	0.36	-0.2
2,044,280	-		MPMX19_01962	0.36	-1.8
2,044,280	-		MPMX19_01962	0.36	+0.1
2,044,280	-		MPMX19_01962	0.36	-0.4
2,044,280	-		MPMX19_01962	0.36	-0.8
2,044,280	-		MPMX19_01962	0.36	-1.4
2,044,280	-		MPMX19_01962	0.36	-0.2
2,044,280	-		MPMX19_01962	0.36	-3.4
2,044,280	-		MPMX19_01962	0.36	-1.5
2,044,280	-		MPMX19_01962	0.36	+0.8
2,044,280	-		MPMX19_01962	0.36	-1.7