Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01792

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,876,928	+				-0.9
1,876,928	+				-0.1
1,876,929	-				-0.4
1,876,929	-				+0.0
1,876,929	-				-1.6
1,877,426	+		MPMX19_01791	0.64	-2.0
1,877,426	+		MPMX19_01791	0.64	+0.3
1,877,426	+		MPMX19_01791	0.64	+0.6
1,877,426	+		MPMX19_01791	0.64	-0.2
1,877,427	-		MPMX19_01791	0.65	-1.2
1,877,427	-		MPMX19_01791	0.65	+0.3
1,877,427	-		MPMX19_01791	0.65	-1.0
1,877,427	-		MPMX19_01791	0.65	-0.8
1,877,427	-		MPMX19_01791	0.65	-0.6
1,877,600	+		MPMX19_01791	0.84	-2.7
1,877,600	+		MPMX19_01791	0.84	+0.0
1,877,600	+		MPMX19_01791	0.84	-0.7
1,877,600	+		MPMX19_01791	0.84	-1.6
1,877,600	+		MPMX19_01791	0.84	-0.4
1,877,600	+		MPMX19_01791	0.84	-1.0
1,877,600	+		MPMX19_01791	0.84	+0.2
1,877,600	+		MPMX19_01791	0.84	-1.8
1,877,601	-		MPMX19_01791	0.84	-1.9
1,877,601	-		MPMX19_01791	0.84	-0.3
1,877,601	-		MPMX19_01791	0.84	-0.7
1,877,601	-		MPMX19_01791	0.84	-0.4
1,877,601	-		MPMX19_01791	0.84	+0.6
1,877,601	-		MPMX19_01791	0.84	+0.5
1,877,601	-		MPMX19_01791	0.84	+0.2
1,877,601	-		MPMX19_01791	0.84	-0.4
1,877,765	+				-0.9
1,877,765	+				-1.1
1,877,765	+				+0.1
1,877,766	-				-0.3
1,877,766	-				-1.7
1,878,158	+		MPMX19_01792	0.48	-1.3
1,878,158	+		MPMX19_01792	0.48	+0.4
1,878,158	+		MPMX19_01792	0.48	-1.6
1,878,158	+		MPMX19_01792	0.48	-1.6
1,878,158	+		MPMX19_01792	0.48	-0.3
1,878,159	-		MPMX19_01792	0.48	-0.7
1,878,159	-		MPMX19_01792	0.48	+0.6
1,878,159	-		MPMX19_01792	0.48	-2.4
1,878,159	-		MPMX19_01792	0.48	-3.3
1,878,159	-		MPMX19_01792	0.48	+0.7
1,878,159	-		MPMX19_01792	0.48	+0.5
1,878,159	-		MPMX19_01792	0.48	+0.3
1,878,159	-		MPMX19_01792	0.48	-0.1
1,878,159	-		MPMX19_01792	0.48	-0.5
1,878,159	-		MPMX19_01792	0.48	+0.2
1,878,323	+		MPMX19_01792	0.71	+1.6
1,878,323	+		MPMX19_01792	0.71	-0.4
1,878,323	+		MPMX19_01792	0.71	+0.6
1,878,323	+		MPMX19_01792	0.71	+1.0
1,878,324	-		MPMX19_01792	0.71	+0.0
1,878,324	-		MPMX19_01792	0.71	+1.2
1,878,324	-		MPMX19_01792	0.71	-1.1
1,878,324	-		MPMX19_01792	0.71	-0.4
1,878,324	-		MPMX19_01792	0.71	-0.8
1,878,498	+				-0.1
1,878,499	-				-1.7
1,878,545	+				-1.2
1,878,545	+				-0.5
1,878,545	+				+0.7
1,878,545	+				-0.7
1,878,546	-				+0.3
1,878,546	-				-1.0
1,878,637	-				-0.4
1,878,637	-				+0.6
1,878,637	-				+0.0
1,878,642	+				-1.0
1,878,642	+				-0.1
1,878,642	+				-0.9
1,878,643	-				-0.6
1,878,647	-				+0.4
1,878,691	+				-1.0
1,878,691	+				-0.6
1,878,691	+				-0.2
1,878,692	-				-0.4
1,878,692	-				-0.3
1,878,742	+				+1.9
1,878,742	+				-0.8
1,878,743	-				-1.3
1,878,743	-				+0.2
1,878,744	+				-0.6
1,878,745	-				-0.6
1,878,745	-				-1.0
1,878,745	-				-0.5
1,878,745	-				-0.6
1,878,745	-				+0.0
1,878,745	-				-0.6
1,878,745	-				-0.6
1,878,766	+				+0.0
1,878,766	+				-0.1
1,878,767	-				-0.7
1,878,788	+				-0.6
1,878,788	+				-1.3
1,878,788	+				+1.1
1,878,788	+				-1.2
1,878,788	+				-0.4
1,878,788	+				+0.6
1,878,788	+				-1.1
1,878,788	+				-0.4
1,878,789	-				+0.0
1,878,789	-				+1.0
1,878,797	-				-0.9
1,878,805	-				-1.0
1,879,229	+		MPMX19_01793	0.45	-2.3
1,879,229	+		MPMX19_01793	0.45	-0.4
1,879,229	+		MPMX19_01793	0.45	-1.8
1,879,229	+		MPMX19_01793	0.45	+1.0
1,879,229	+		MPMX19_01793	0.45	-0.2
1,879,229	+		MPMX19_01793	0.45	+0.0
1,879,230	-		MPMX19_01793	0.45	+0.8
1,879,230	-		MPMX19_01793	0.45	+1.1
1,879,230	-		MPMX19_01793	0.45	-0.5
1,879,230	-		MPMX19_01793	0.45	-0.2
1,879,230	-		MPMX19_01793	0.45	+0.5
1,879,230	-		MPMX19_01793	0.45	+0.7
1,879,230	-		MPMX19_01793	0.45	-0.2
1,879,230	-		MPMX19_01793	0.45	-0.8
1,879,230	-		MPMX19_01793	0.45	+1.1
1,879,230	-		MPMX19_01793	0.45	+0.0
1,879,301	+		MPMX19_01793	0.56	-0.5
1,879,301	+		MPMX19_01793	0.56	-0.1
1,879,301	+		MPMX19_01793	0.56	-0.5
1,879,301	+		MPMX19_01793	0.56	-0.3
1,879,301	+		MPMX19_01793	0.56	+0.1
1,879,301	+		MPMX19_01793	0.56	+0.7
1,879,301	+		MPMX19_01793	0.56	-0.7
1,879,302	-		MPMX19_01793	0.56	-1.7
1,879,302	-		MPMX19_01793	0.56	+0.1
1,879,302	-		MPMX19_01793	0.56	+0.4
1,879,302	-		MPMX19_01793	0.56	-1.0
1,879,302	-		MPMX19_01793	0.56	+0.0