Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01759

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,846,314	+				-0.8
1,846,315	-				-1.6
1,846,385	-				+0.3
1,846,495	+		MPMX19_01758	0.18	-1.3
1,846,496	-		MPMX19_01758	0.18	+0.9
1,846,609	+		MPMX19_01758	0.36	-0.4
1,846,609	+		MPMX19_01758	0.36	-0.4
1,846,609	+		MPMX19_01758	0.36	+0.9
1,846,609	+		MPMX19_01758	0.36	+0.0
1,846,609	+		MPMX19_01758	0.36	-1.0
1,846,609	+		MPMX19_01758	0.36	+0.9
1,846,609	+		MPMX19_01758	0.36	-0.2
1,846,609	+		MPMX19_01758	0.36	-1.6
1,846,609	+		MPMX19_01758	0.36	+0.6
1,846,609	+		MPMX19_01758	0.36	-0.3
1,846,609	+		MPMX19_01758	0.36	+0.9
1,846,609	+		MPMX19_01758	0.36	-0.6
1,846,610	-		MPMX19_01758	0.36	+0.0
1,846,610	-		MPMX19_01758	0.36	+1.0
1,846,610	-		MPMX19_01758	0.36	+0.8
1,846,610	-		MPMX19_01758	0.36	+0.9
1,846,610	-		MPMX19_01758	0.36	+0.6
1,846,610	-		MPMX19_01758	0.36	-0.1
1,846,610	-		MPMX19_01758	0.36	-0.7
1,846,610	-		MPMX19_01758	0.36	-1.6
1,846,610	-		MPMX19_01758	0.36	+0.3
1,846,610	-		MPMX19_01758	0.36	-1.0
1,846,610	-		MPMX19_01758	0.36	+0.2
1,846,610	-		MPMX19_01758	0.36	-0.2
1,846,610	-		MPMX19_01758	0.36	-0.4
1,846,610	-		MPMX19_01758	0.36	+0.0
1,846,623	+		MPMX19_01758	0.38	-1.2
1,846,623	+		MPMX19_01758	0.38	-1.0
1,846,624	-		MPMX19_01758	0.38	-0.1
1,846,624	-		MPMX19_01758	0.38	+0.2
1,846,741	+		MPMX19_01758	0.57	-1.8
1,846,741	+		MPMX19_01758	0.57	+1.1
1,846,741	+		MPMX19_01758	0.57	+1.0
1,846,741	+		MPMX19_01758	0.57	-0.6
1,846,741	+		MPMX19_01758	0.57	+0.7
1,846,741	+		MPMX19_01758	0.57	-0.4
1,846,741	+		MPMX19_01758	0.57	-3.0
1,846,741	+		MPMX19_01758	0.57	-0.4
1,846,741	+		MPMX19_01758	0.57	-0.7
1,846,741	+		MPMX19_01758	0.57	-2.1
1,846,741	+		MPMX19_01758	0.57	-0.6
1,846,741	+		MPMX19_01758	0.57	+1.0
1,846,742	-		MPMX19_01758	0.57	-1.2
1,846,742	-		MPMX19_01758	0.57	+0.1
1,846,742	-		MPMX19_01758	0.57	-0.6
1,846,742	-		MPMX19_01758	0.57	-0.7
1,846,742	-		MPMX19_01758	0.57	-1.7
1,846,742	-		MPMX19_01758	0.57	-0.2
1,846,742	-		MPMX19_01758	0.57	-1.4
1,846,742	-		MPMX19_01758	0.57	+0.4
1,846,742	-		MPMX19_01758	0.57	-0.5
1,846,742	-		MPMX19_01758	0.57	-0.6
1,846,742	-		MPMX19_01758	0.57	-1.0
1,846,742	-		MPMX19_01758	0.57	-0.5
1,846,742	-		MPMX19_01758	0.57	+0.4
1,846,742	-		MPMX19_01758	0.57	-0.3
1,846,742	-		MPMX19_01758	0.57	-0.5
1,846,742	-		MPMX19_01758	0.57	-2.1
1,846,742	-		MPMX19_01758	0.57	-0.7
1,846,742	-		MPMX19_01758	0.57	-0.7
1,846,742	-		MPMX19_01758	0.57	+0.0
1,846,742	-		MPMX19_01758	0.57	-0.2
1,846,742	-		MPMX19_01758	0.57	+1.0
1,846,768	+		MPMX19_01758	0.61	+0.2
1,846,768	+		MPMX19_01758	0.61	+0.2
1,846,769	-		MPMX19_01758	0.61	+0.6
1,846,769	-		MPMX19_01758	0.61	+0.6
1,847,049	-				+0.4
1,847,049	-				+0.0
1,847,072	-				-1.8
1,847,075	+				-0.2
1,847,075	+				-0.6
1,847,075	+				-1.1
1,847,075	+				-0.8
1,847,076	-				-0.1
1,847,076	-				-0.3
1,847,076	-				+1.6
1,847,076	-				-0.1
1,847,076	-				-0.4
1,847,076	-				-0.7
1,847,076	-				+0.4
1,847,076	-				-2.1
1,847,076	-				-0.6
1,847,076	-				+0.6
1,847,104	+				+0.5
1,847,104	+				+0.0
1,847,105	-				-0.6
1,847,105	-				-0.8
1,847,105	-				+0.0
1,847,105	-				-0.7
1,847,119	+				-0.8
1,847,119	+				-1.4
1,847,119	+				-1.7
1,847,120	-				+0.8
1,847,120	-				-0.4
1,847,617	+		MPMX19_01759	0.55	-0.3
1,847,617	+		MPMX19_01759	0.55	-0.3
1,847,617	+		MPMX19_01759	0.55	-0.5
1,847,617	+		MPMX19_01759	0.55	+0.3
1,847,617	+		MPMX19_01759	0.55	-1.6
1,847,617	+		MPMX19_01759	0.55	+1.0
1,847,617	+		MPMX19_01759	0.55	-0.1
1,847,617	+		MPMX19_01759	0.55	+0.3
1,847,617	+		MPMX19_01759	0.55	-0.5
1,847,617	+		MPMX19_01759	0.55	-0.8
1,847,617	+		MPMX19_01759	0.55	-0.5
1,847,617	+		MPMX19_01759	0.55	-1.2
1,847,617	+		MPMX19_01759	0.55	+0.0
1,847,617	+		MPMX19_01759	0.55	-1.0
1,847,617	+		MPMX19_01759	0.55	-0.7
1,847,617	+		MPMX19_01759	0.55	-0.1
1,847,617	+		MPMX19_01759	0.55	+0.0
1,847,618	-		MPMX19_01759	0.55	-0.2
1,847,618	-		MPMX19_01759	0.55	-0.6
1,847,618	-		MPMX19_01759	0.55	-1.2
1,847,618	-		MPMX19_01759	0.55	+0.0
1,847,618	-		MPMX19_01759	0.55	+0.1
1,847,618	-		MPMX19_01759	0.55	-1.8
1,847,618	-		MPMX19_01759	0.55	-1.6
1,847,618	-		MPMX19_01759	0.55	-0.4
1,847,618	-		MPMX19_01759	0.55	+0.3
1,847,618	-		MPMX19_01759	0.55	+0.8
1,847,618	-		MPMX19_01759	0.55	+0.5
1,847,618	-		MPMX19_01759	0.55	-0.0
1,847,618	-		MPMX19_01759	0.55	+0.2
1,847,618	-		MPMX19_01759	0.55	-0.7
1,847,618	-		MPMX19_01759	0.55	-1.0
1,847,683	+		MPMX19_01759	0.62	+1.6
1,847,703	-		MPMX19_01759	0.64	-0.8
1,848,061	+				+0.2
1,848,061	+				+0.3
1,848,061	+				-0.6
1,848,061	+				-0.6
1,848,061	+				-0.3
1,848,061	+				-0.5
1,848,061	+				-0.3
1,848,061	+				-0.5
1,848,061	+				-1.2
1,848,061	+				+0.0
1,848,061	+				-0.6
1,848,061	+				-0.6
1,848,061	+				-1.1
1,848,061	+				-1.1
1,848,061	+				-1.0
1,848,061	+				+0.1
1,848,061	+				-0.4
1,848,061	+				-0.8
1,848,061	+				-1.3
1,848,061	+				-0.9
1,848,061	+				-2.4
1,848,061	+				-1.1
1,848,062	-				+0.4
1,848,062	-				+1.5
1,848,062	-				+1.0
1,848,062	-				-0.7
1,848,062	-				-0.0
1,848,062	-				-0.2
1,848,062	-				-1.7
1,848,062	-				-1.6
1,848,062	-				-1.1
1,848,062	-				-1.2
1,848,062	-				-1.0
1,848,062	-				-2.8
1,848,062	-				-0.9
1,848,062	-				-2.4
1,848,062	-				+0.2
1,848,062	-				-0.8
1,848,062	-				-1.0
1,848,062	-				-0.7
1,848,062	-				+0.2
1,848,062	-				-0.7
1,848,062	-				-1.2
1,848,062	-				-1.2
1,848,062	-				+0.3
1,848,062	-				-1.4
1,848,062	-				-1.1
1,848,062	-				-0.8
1,848,062	-				-0.4
1,848,062	-				-0.5
1,848,062	-				-0.3
1,848,062	-				-1.2
1,848,062	-				-0.1
1,848,062	-				-1.3
1,848,062	-				-1.4
1,848,062	-				-0.3
1,848,062	-				+0.4
1,848,063	+				-0.4
1,848,063	+				-1.8
1,848,063	+				+1.6
1,848,063	+				+0.0
1,848,063	+				+1.6
1,848,063	+				-0.4
1,848,064	-				-0.3
1,848,064	-				+0.3
1,848,064	-				-1.0
1,848,064	-				-0.1
1,848,172	+				-0.7
1,848,173	-				-2.0
1,848,250	+				-0.3
1,848,250	+				-1.6
1,848,250	+				-0.4
1,848,251	-				-1.4
1,848,251	-				+0.8
1,848,251	-				+0.3
1,848,251	-				+0.6
1,848,251	-				+0.2
1,848,251	-				+0.6
1,848,251	-				-0.6
1,848,251	-				+0.9
1,848,307	+		MPMX19_01760	0.12	+0.6
1,848,307	+		MPMX19_01760	0.12	-1.6
1,848,307	+		MPMX19_01760	0.12	+0.3
1,848,307	+		MPMX19_01760	0.12	+0.3
1,848,307	+		MPMX19_01760	0.12	-0.2
1,848,307	+		MPMX19_01760	0.12	+1.8
1,848,308	-		MPMX19_01760	0.12	+0.5
1,848,308	-		MPMX19_01760	0.12	-1.6
1,848,308	-		MPMX19_01760	0.12	-0.2
1,848,308	-		MPMX19_01760	0.12	+0.4
1,848,308	-		MPMX19_01760	0.12	+0.5
1,848,308	-		MPMX19_01760	0.12	-0.1
1,848,308	-		MPMX19_01760	0.12	-1.4
1,848,308	-		MPMX19_01760	0.12	-0.8
1,848,308	-		MPMX19_01760	0.12	-2.1
1,848,346	+		MPMX19_01760	0.14	-0.1
1,848,346	+		MPMX19_01760	0.14	-0.8
1,848,346	+		MPMX19_01760	0.14	+1.6
1,848,346	+		MPMX19_01760	0.14	+0.0
1,848,346	+		MPMX19_01760	0.14	+0.7
1,848,346	+		MPMX19_01760	0.14	-1.0
1,848,346	+		MPMX19_01760	0.14	-0.4
1,848,346	+		MPMX19_01760	0.14	-2.6
1,848,346	+		MPMX19_01760	0.14	+0.6
1,848,347	-		MPMX19_01760	0.14	-1.1
1,848,347	-		MPMX19_01760	0.14	-0.8
1,848,347	-		MPMX19_01760	0.14	-1.0
1,848,347	-		MPMX19_01760	0.14	-0.1
1,848,361	+		MPMX19_01760	0.15	-1.2
1,848,361	+		MPMX19_01760	0.15	-1.2
1,848,361	+		MPMX19_01760	0.15	-1.3
1,848,361	+		MPMX19_01760	0.15	+0.3
1,848,361	+		MPMX19_01760	0.15	-0.4
1,848,361	+		MPMX19_01760	0.15	-1.3
1,848,361	+		MPMX19_01760	0.15	+0.9
1,848,362	-		MPMX19_01760	0.15	+0.4
1,848,362	-		MPMX19_01760	0.15	+0.6
1,848,362	-		MPMX19_01760	0.15	+1.1
1,848,362	-		MPMX19_01760	0.15	-0.6
1,848,362	-		MPMX19_01760	0.15	-0.4
1,848,401	-		MPMX19_01760	0.17	-0.7
1,848,526	+		MPMX19_01760	0.24	+0.4
1,848,526	+		MPMX19_01760	0.24	-1.5
1,848,527	-		MPMX19_01760	0.24	-3.2
1,848,527	-		MPMX19_01760	0.24	-0.4
1,848,527	-		MPMX19_01760	0.24	+1.0
1,848,557	-		MPMX19_01760	0.26	+0.3
1,848,596	+		MPMX19_01760	0.28	-1.6
1,848,596	+		MPMX19_01760	0.28	+0.3
1,848,596	+		MPMX19_01760	0.28	-0.3
1,848,596	+		MPMX19_01760	0.28	+0.5
1,848,596	+		MPMX19_01760	0.28	-0.8
1,848,597	-		MPMX19_01760	0.28	-0.6
1,848,597	-		MPMX19_01760	0.28	-1.8
1,848,597	-		MPMX19_01760	0.28	-1.0
1,848,597	-		MPMX19_01760	0.28	+0.0
1,848,597	-		MPMX19_01760	0.28	-1.4
1,848,597	-		MPMX19_01760	0.28	-0.1
1,848,597	-		MPMX19_01760	0.28	-1.3
1,848,682	-		MPMX19_01760	0.32	+1.0
1,848,853	+		MPMX19_01760	0.42	-0.1
1,848,853	+		MPMX19_01760	0.42	+0.4
1,848,853	+		MPMX19_01760	0.42	+0.9
1,848,854	-		MPMX19_01760	0.42	-0.8
1,848,854	-		MPMX19_01760	0.42	-0.7
1,848,854	-		MPMX19_01760	0.42	-0.4
1,848,854	-		MPMX19_01760	0.42	+0.3
1,848,941	-		MPMX19_01760	0.47	-1.7
1,848,961	+		MPMX19_01760	0.48	+0.6
1,848,961	+		MPMX19_01760	0.48	+0.2
1,848,961	+		MPMX19_01760	0.48	-0.4
1,848,962	-		MPMX19_01760	0.48	-0.6
1,848,962	-		MPMX19_01760	0.48	+0.6
1,848,962	-		MPMX19_01760	0.48	-0.7
1,848,962	-		MPMX19_01760	0.48	-0.4
1,848,964	+		MPMX19_01760	0.48	-0.4
1,848,964	+		MPMX19_01760	0.48	+0.6
1,848,964	+		MPMX19_01760	0.48	-0.4
1,848,964	+		MPMX19_01760	0.48	+0.2
1,848,964	+		MPMX19_01760	0.48	-0.8
1,848,964	+		MPMX19_01760	0.48	-0.1
1,848,964	+		MPMX19_01760	0.48	-0.6
1,848,964	+		MPMX19_01760	0.48	-1.2
1,848,964	+		MPMX19_01760	0.48	-0.2
1,848,965	-		MPMX19_01760	0.48	-0.8
1,848,965	-		MPMX19_01760	0.48	+0.6
1,848,965	-		MPMX19_01760	0.48	+0.3
1,848,965	-		MPMX19_01760	0.48	-1.6
1,848,965	-		MPMX19_01760	0.48	-1.2
1,848,965	-		MPMX19_01760	0.48	+0.6
1,848,965	-		MPMX19_01760	0.48	-0.3
1,849,006	+		MPMX19_01760	0.50	-0.4
1,849,006	+		MPMX19_01760	0.50	+0.4
1,849,007	-		MPMX19_01760	0.50	+0.3
1,849,007	-		MPMX19_01760	0.50	-1.2
1,849,007	-		MPMX19_01760	0.50	-1.2
1,849,007	-		MPMX19_01760	0.50	-0.7
1,849,007	-		MPMX19_01760	0.50	+0.3