Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01730

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,819,782	+		MPMX19_01727	0.88	+0.8
1,819,782	+		MPMX19_01727	0.88	-0.5
1,819,783	-		MPMX19_01727	0.88	-0.2
1,819,783	-		MPMX19_01727	0.88	-0.1
1,819,783	-		MPMX19_01727	0.88	-2.2
1,819,783	-		MPMX19_01727	0.88	-1.0
1,819,798	-				+0.3
1,819,798	-				-0.2
1,819,836	+				+0.2
1,819,836	+				-1.1
1,819,836	+				-0.2
1,819,837	-				+0.0
1,819,837	-				-1.3
1,819,837	-				+0.9
1,819,837	-				-0.4
1,819,837	-				-0.8
1,819,837	-				+0.9
1,819,837	-				-0.7
1,819,837	-				-0.6
1,819,837	-				-1.3
1,819,837	-				+0.6
1,819,837	-				+1.1
1,820,094	+		MPMX19_01728	0.87	+0.1
1,820,094	+		MPMX19_01728	0.87	+0.0
1,820,094	+		MPMX19_01728	0.87	-0.7
1,820,094	+		MPMX19_01728	0.87	+0.2
1,820,094	+		MPMX19_01728	0.87	-0.1
1,820,094	+		MPMX19_01728	0.87	+0.3
1,820,094	+		MPMX19_01728	0.87	+1.0
1,820,095	-		MPMX19_01728	0.88	+0.1
1,820,095	-		MPMX19_01728	0.88	-0.5
1,820,095	-		MPMX19_01728	0.88	-0.1
1,820,095	-		MPMX19_01728	0.88	-1.1
1,820,095	-		MPMX19_01728	0.88	-0.1
1,820,095	-		MPMX19_01728	0.88	-1.1
1,820,095	-		MPMX19_01728	0.88	-0.1
1,820,095	-		MPMX19_01728	0.88	-1.2
1,820,095	-		MPMX19_01728	0.88	-2.5
1,820,095	-		MPMX19_01728	0.88	-0.4
1,820,095	-		MPMX19_01728	0.88	-0.6
1,820,095	-		MPMX19_01728	0.88	-1.4
1,820,095	-		MPMX19_01728	0.88	-1.7
1,820,095	-		MPMX19_01728	0.88	-0.3
1,820,095	-		MPMX19_01728	0.88	-0.2
1,820,095	-		MPMX19_01728	0.88	-1.1
1,820,342	+		MPMX19_01729	0.40	+0.5
1,820,342	+		MPMX19_01729	0.40	+0.9
1,820,342	+		MPMX19_01729	0.40	-0.7
1,820,343	-		MPMX19_01729	0.40	+0.0
1,820,343	-		MPMX19_01729	0.40	-1.4
1,820,343	-		MPMX19_01729	0.40	-1.0
1,820,343	-		MPMX19_01729	0.40	+0.6
1,820,343	-		MPMX19_01729	0.40	+0.9
1,820,343	-		MPMX19_01729	0.40	-0.4
1,820,515	-		MPMX19_01729	0.82	+0.0
1,820,619	+				-0.4
1,820,632	+				+1.3
1,820,632	+				-3.1
1,820,633	-				-0.5
1,820,633	-				-0.4
1,820,633	-				+0.9
1,820,641	+				-0.1
1,820,641	+				-2.7
1,820,641	+				+0.5
1,820,641	+				+0.3
1,820,641	+				-1.2
1,820,641	+				+1.0
1,820,641	+				-1.8
1,820,641	+				+0.0
1,820,641	+				+0.4
1,820,641	+				-1.4
1,820,641	+				+0.5
1,820,642	-				-1.8
1,820,642	-				-1.0
1,820,642	-				-0.9
1,820,642	-				+0.7
1,820,642	-				-0.1
1,820,642	-				+0.7
1,820,642	-				-0.9
1,820,642	-				+0.1
1,820,642	-				+1.1
1,820,642	-				+0.1
1,820,642	-				+0.4
1,820,642	-				+0.9
1,820,643	+				-1.8
1,820,643	+				-1.1
1,820,643	+				-0.1
1,820,643	+				-0.2
1,820,643	+				+0.1
1,820,643	+				-0.1
1,820,643	+				-0.1
1,820,643	+				-2.8
1,820,643	+				-1.4
1,820,643	+				-0.1
1,820,643	+				-0.8
1,820,643	+				-0.8
1,820,643	+				+0.0
1,820,643	+				-1.0
1,820,643	+				-0.4
1,820,643	+				-0.7
1,820,643	+				+0.6
1,820,643	+				+0.3
1,820,643	+				-0.6
1,820,643	+				+0.6
1,820,643	+				-1.8
1,820,643	+				-1.4
1,820,643	+				-0.4
1,820,643	+				+1.8
1,820,643	+				-0.2
1,820,643	+				+0.8
1,820,643	+				-0.3
1,820,643	+				+0.4
1,820,643	+				+0.5
1,820,644	-				-1.4
1,820,644	-				+1.6
1,820,644	-				-2.2
1,820,644	-				+0.5
1,820,644	-				+0.2
1,820,644	-				-1.1
1,820,644	-				+0.3
1,820,644	-				-0.2
1,820,644	-				-1.1
1,820,644	-				-1.1
1,820,644	-				-0.1
1,820,644	-				-0.8
1,820,644	-				-1.1
1,820,644	-				-0.6
1,820,644	-				-0.4
1,820,644	-				-0.3
1,820,644	-				+0.2
1,820,644	-				+0.2
1,820,644	-				+0.0
1,820,644	-				-0.4
1,820,644	-				-2.8
1,820,644	-				+0.5
1,820,644	-				-2.0
1,820,644	-				-2.2
1,820,644	-				+0.7
1,820,644	-				-0.5
1,820,644	-				+0.3
1,820,644	-				-0.8
1,821,151	+		MPMX19_01730	0.29	-0.1
1,821,151	+		MPMX19_01730	0.29	-2.4
1,821,151	+		MPMX19_01730	0.29	-0.2
1,821,151	+		MPMX19_01730	0.29	+0.0
1,821,151	+		MPMX19_01730	0.29	+0.6
1,821,151	+		MPMX19_01730	0.29	+0.0
1,821,151	+		MPMX19_01730	0.29	+1.3
1,821,151	+		MPMX19_01730	0.29	+0.9
1,821,151	+		MPMX19_01730	0.29	-0.2
1,821,151	+		MPMX19_01730	0.29	+0.1
1,821,151	+		MPMX19_01730	0.29	-1.4
1,821,151	+		MPMX19_01730	0.29	+0.5
1,821,151	+		MPMX19_01730	0.29	-0.5
1,821,152	-		MPMX19_01730	0.29	-0.6
1,821,152	-		MPMX19_01730	0.29	-1.1
1,821,152	-		MPMX19_01730	0.29	-0.5
1,821,152	-		MPMX19_01730	0.29	-0.5
1,821,152	-		MPMX19_01730	0.29	-1.5
1,821,152	-		MPMX19_01730	0.29	-0.9
1,821,152	-		MPMX19_01730	0.29	-0.6
1,821,152	-		MPMX19_01730	0.29	-0.4
1,821,152	-		MPMX19_01730	0.29	-0.5
1,821,152	-		MPMX19_01730	0.29	-0.6
1,821,152	-		MPMX19_01730	0.29	+0.3
1,821,152	-		MPMX19_01730	0.29	-1.2
1,821,185	+		MPMX19_01730	0.31	-0.4
1,821,185	+		MPMX19_01730	0.31	-1.0
1,821,185	+		MPMX19_01730	0.31	-0.7
1,821,185	+		MPMX19_01730	0.31	-1.2
1,821,185	+		MPMX19_01730	0.31	-1.6
1,821,185	+		MPMX19_01730	0.31	+1.6
1,821,185	+		MPMX19_01730	0.31	-1.6
1,821,185	+		MPMX19_01730	0.31	+0.3
1,821,185	+		MPMX19_01730	0.31	+0.2
1,821,185	+		MPMX19_01730	0.31	-0.9
1,821,185	+		MPMX19_01730	0.31	-0.9
1,821,185	+		MPMX19_01730	0.31	+0.3
1,821,185	+		MPMX19_01730	0.31	-0.9
1,821,185	+		MPMX19_01730	0.31	-2.4
1,821,185	+		MPMX19_01730	0.31	-0.3
1,821,185	+		MPMX19_01730	0.31	-0.6
1,821,185	+		MPMX19_01730	0.31	-0.6
1,821,185	+		MPMX19_01730	0.31	+0.0
1,821,185	+		MPMX19_01730	0.31	+0.2
1,821,185	+		MPMX19_01730	0.31	-0.4
1,821,185	+		MPMX19_01730	0.31	+0.0
1,821,185	+		MPMX19_01730	0.31	-0.2
1,821,186	-		MPMX19_01730	0.31	-0.2
1,821,186	-		MPMX19_01730	0.31	+0.3
1,821,186	-		MPMX19_01730	0.31	-0.7
1,821,186	-		MPMX19_01730	0.31	-0.1
1,821,186	-		MPMX19_01730	0.31	-0.7
1,821,186	-		MPMX19_01730	0.31	+1.4
1,821,186	-		MPMX19_01730	0.31	+0.0
1,821,186	-		MPMX19_01730	0.31	-1.7
1,821,186	-		MPMX19_01730	0.31	+0.8
1,821,186	-		MPMX19_01730	0.31	+0.2
1,821,186	-		MPMX19_01730	0.31	-0.8
1,821,186	-		MPMX19_01730	0.31	-0.2
1,821,186	-		MPMX19_01730	0.31	+0.6
1,821,186	-		MPMX19_01730	0.31	-1.2
1,821,186	-		MPMX19_01730	0.31	-0.7
1,821,186	-		MPMX19_01730	0.31	-1.0
1,821,186	-		MPMX19_01730	0.31	+0.4
1,821,186	-		MPMX19_01730	0.31	+0.4
1,821,186	-		MPMX19_01730	0.31	-2.5
1,821,186	-		MPMX19_01730	0.31	-0.9
1,821,186	-		MPMX19_01730	0.31	-0.9
1,821,186	-		MPMX19_01730	0.31	-0.3
1,821,186	-		MPMX19_01730	0.31	-0.2
1,821,186	-		MPMX19_01730	0.31	+0.2
1,821,186	-		MPMX19_01730	0.31	-0.3
1,821,186	-		MPMX19_01730	0.31	-0.5
1,821,458	+		MPMX19_01730	0.47	+0.7
1,821,458	+		MPMX19_01730	0.47	+0.4
1,821,458	+		MPMX19_01730	0.47	-0.2
1,821,458	+		MPMX19_01730	0.47	-0.5
1,821,458	+		MPMX19_01730	0.47	+0.4
1,821,458	+		MPMX19_01730	0.47	-0.8
1,821,458	+		MPMX19_01730	0.47	-0.8
1,821,458	+		MPMX19_01730	0.47	-1.4
1,821,458	+		MPMX19_01730	0.47	-0.4
1,821,458	+		MPMX19_01730	0.47	-0.6
1,821,458	+		MPMX19_01730	0.47	-1.1
1,821,459	-		MPMX19_01730	0.47	-1.6
1,821,459	-		MPMX19_01730	0.47	-1.0
1,821,459	-		MPMX19_01730	0.47	-1.2
1,821,459	-		MPMX19_01730	0.47	-1.2
1,821,459	-		MPMX19_01730	0.47	+0.0
1,821,459	-		MPMX19_01730	0.47	-0.5
1,821,459	-		MPMX19_01730	0.47	-1.8
1,821,459	-		MPMX19_01730	0.47	+0.6
1,821,459	-		MPMX19_01730	0.47	-1.5
1,821,459	-		MPMX19_01730	0.47	-0.2
1,821,503	+		MPMX19_01730	0.49	-0.3
1,821,503	+		MPMX19_01730	0.49	-0.1
1,821,504	-		MPMX19_01730	0.49	+0.5
1,821,911	+		MPMX19_01730	0.73	+0.2
1,821,911	+		MPMX19_01730	0.73	-2.0
1,821,911	+		MPMX19_01730	0.73	+0.4
1,821,911	+		MPMX19_01730	0.73	-1.2
1,821,911	+		MPMX19_01730	0.73	+0.9
1,821,911	+		MPMX19_01730	0.73	+0.9
1,821,911	+		MPMX19_01730	0.73	+0.9
1,821,911	+		MPMX19_01730	0.73	+0.2
1,821,911	+		MPMX19_01730	0.73	-1.0
1,821,911	+		MPMX19_01730	0.73	-0.3
1,821,911	+		MPMX19_01730	0.73	-0.2
1,821,911	+		MPMX19_01730	0.73	-0.8
1,821,911	+		MPMX19_01730	0.73	-1.4
1,821,912	-		MPMX19_01730	0.73	+0.5
1,821,912	-		MPMX19_01730	0.73	-1.5
1,821,912	-		MPMX19_01730	0.73	-0.5
1,821,912	-		MPMX19_01730	0.73	+0.5
1,821,912	-		MPMX19_01730	0.73	-0.2
1,821,912	-		MPMX19_01730	0.73	+0.4
1,821,912	-		MPMX19_01730	0.73	-0.4
1,821,912	-		MPMX19_01730	0.73	+0.5
1,821,912	-		MPMX19_01730	0.73	-1.4
1,821,912	-		MPMX19_01730	0.73	-1.2
1,821,912	-		MPMX19_01730	0.73	-1.0
1,821,912	-		MPMX19_01730	0.73	+0.2
1,821,912	-		MPMX19_01730	0.73	-0.3
1,821,912	-		MPMX19_01730	0.73	+0.0
1,821,912	-		MPMX19_01730	0.73	-2.0
1,822,037	+		MPMX19_01730	0.80	-1.2
1,822,037	+		MPMX19_01730	0.80	+0.2
1,822,037	+		MPMX19_01730	0.80	-0.2
1,822,037	+		MPMX19_01730	0.80	-1.8
1,822,037	+		MPMX19_01730	0.80	-2.1
1,822,037	+		MPMX19_01730	0.80	+0.6
1,822,037	+		MPMX19_01730	0.80	-0.2
1,822,037	+		MPMX19_01730	0.80	+0.8
1,822,038	-		MPMX19_01730	0.81	-2.3
1,822,038	-		MPMX19_01730	0.81	+0.8
1,822,038	-		MPMX19_01730	0.81	-1.1
1,822,038	-		MPMX19_01730	0.81	+0.0
1,822,067	+		MPMX19_01730	0.82	-1.0
1,822,067	+		MPMX19_01730	0.82	-1.8
1,822,067	+		MPMX19_01730	0.82	-2.6
1,822,067	+		MPMX19_01730	0.82	+1.0
1,822,067	+		MPMX19_01730	0.82	-0.7
1,822,067	+		MPMX19_01730	0.82	-0.8
1,822,067	+		MPMX19_01730	0.82	+0.0
1,822,068	-		MPMX19_01730	0.82	-0.7
1,822,068	-		MPMX19_01730	0.82	+0.2
1,822,068	-		MPMX19_01730	0.82	+2.2
1,822,068	-		MPMX19_01730	0.82	+0.3
1,822,068	-		MPMX19_01730	0.82	-2.5
1,822,068	-		MPMX19_01730	0.82	+0.5
1,822,068	-		MPMX19_01730	0.82	+1.3
1,822,068	-		MPMX19_01730	0.82	-0.6
1,822,068	-		MPMX19_01730	0.82	+1.1
1,822,068	-		MPMX19_01730	0.82	-1.9
1,822,068	-		MPMX19_01730	0.82	-0.1
1,822,241	+				-0.6
1,822,241	+				+0.2
1,822,241	+				-0.3
1,822,241	+				-1.7
1,822,241	+				-0.1
1,822,241	+				-0.4
1,822,241	+				+0.8
1,822,241	+				-0.4
1,822,241	+				+1.3
1,822,242	-				+0.2
1,822,242	-				+0.6
1,822,242	-				-1.4
1,822,242	-				-1.0
1,822,242	-				+1.6
1,822,292	+				-1.2
1,822,292	+				+0.0
1,822,292	+				-0.5
1,822,292	+				-0.4
1,822,292	+				-0.5
1,822,292	+				-0.2
1,822,292	+				-1.0
1,822,292	+				+0.2
1,822,292	+				+0.4
1,822,292	+				-1.5
1,822,292	+				+0.3
1,822,292	+				-1.6
1,822,292	+				-0.6
1,822,293	-				+0.0
1,822,293	-				-0.6
1,822,293	-				-0.4
1,822,293	-				+0.2
1,822,293	-				+0.6
1,822,293	-				-0.9
1,822,293	-				+0.6
1,822,293	-				+0.2
1,822,293	-				+0.5
1,822,293	-				-0.1
1,822,293	-				-1.4
1,822,293	-				-0.1
1,822,293	-				+0.0
1,822,293	-				+0.3
1,822,293	-				-0.5