Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01719

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,810,854	+		MPMX19_01718	0.19	+0.6
1,810,855	-		MPMX19_01718	0.19	-1.2
1,810,855	-		MPMX19_01718	0.19	+0.6
1,810,981	-		MPMX19_01718	0.31	-1.1
1,811,113	-		MPMX19_01718	0.43	+0.2
1,811,187	-		MPMX19_01718	0.50	-0.8
1,811,556	+		MPMX19_01718	0.85	-2.2
1,811,556	+		MPMX19_01718	0.85	+2.4
1,811,557	-		MPMX19_01718	0.85	-0.4
1,811,557	-		MPMX19_01718	0.85	-0.2
1,811,802	-		MPMX19_01719	0.21	-1.5
1,812,051	-		MPMX19_01719	0.83	-0.5
1,812,051	-		MPMX19_01719	0.83	+0.5
1,812,051	-		MPMX19_01719	0.83	+0.8
1,812,051	-		MPMX19_01719	0.83	+1.0
1,812,169	+				-0.5
1,812,170	-				-0.2
1,812,170	-				+0.2
1,812,170	-				-1.2
1,812,170	-				+1.2
1,812,170	-				-0.8
1,812,170	-				-0.4
1,812,391	+		MPMX19_01720	0.29	-0.7
1,812,392	-		MPMX19_01720	0.29	+0.6
1,812,425	+		MPMX19_01720	0.35	-1.7
1,812,425	+		MPMX19_01720	0.35	-0.4
1,812,426	-		MPMX19_01720	0.35	-1.1
1,812,426	-		MPMX19_01720	0.35	+0.5
1,812,426	-		MPMX19_01720	0.35	-1.8
1,812,635	+		MPMX19_01720	0.72	-0.2
1,812,635	+		MPMX19_01720	0.72	-1.4
1,812,636	-		MPMX19_01720	0.73	-0.3
1,812,752	+				-0.6
1,812,752	+				+0.0
1,812,752	+				-0.2
1,812,770	-				-0.5
1,812,799	+				+0.2
1,812,799	+				+0.6
1,812,800	-				-0.2
1,812,800	-				-0.2
1,812,865	+				-0.5
1,812,865	+				-0.8
1,812,865	+				-1.1
1,812,865	+				-1.5
1,812,865	+				-0.5
1,812,865	+				-1.4
1,812,865	+				+1.2
1,812,865	+				-0.8
1,812,866	-				-0.2
1,812,866	-				+0.7
1,812,866	-				+0.2
1,812,866	-				-0.2
1,812,866	-				+0.5
1,812,866	-				+0.3
1,812,866	-				-0.9
1,812,913	+		MPMX19_01721	0.13	+0.9
1,812,913	+		MPMX19_01721	0.13	-0.3
1,812,913	+		MPMX19_01721	0.13	-1.4
1,812,913	+		MPMX19_01721	0.13	-1.4
1,812,913	+		MPMX19_01721	0.13	+0.0
1,812,913	+		MPMX19_01721	0.13	+0.3
1,812,913	+		MPMX19_01721	0.13	-1.0
1,812,913	+		MPMX19_01721	0.13	-0.9
1,812,913	+		MPMX19_01721	0.13	+0.2
1,812,914	-		MPMX19_01721	0.14	+1.2
1,812,914	-		MPMX19_01721	0.14	+0.6
1,812,914	-		MPMX19_01721	0.14	+0.0
1,812,914	-		MPMX19_01721	0.14	-1.5
1,812,914	-		MPMX19_01721	0.14	-0.9
1,812,914	-		MPMX19_01721	0.14	+1.0
1,812,914	-		MPMX19_01721	0.14	-1.2
1,812,919	+		MPMX19_01721	0.14	-1.6
1,812,919	+		MPMX19_01721	0.14	+1.0
1,812,919	+		MPMX19_01721	0.14	-0.4
1,812,919	+		MPMX19_01721	0.14	+1.4
1,812,919	+		MPMX19_01721	0.14	-0.7
1,812,919	+		MPMX19_01721	0.14	-0.1
1,812,919	+		MPMX19_01721	0.14	+0.8
1,812,919	+		MPMX19_01721	0.14	-0.4
1,812,919	+		MPMX19_01721	0.14	-0.2
1,812,919	+		MPMX19_01721	0.14	+0.5
1,812,919	+		MPMX19_01721	0.14	-0.0
1,812,919	+		MPMX19_01721	0.14	+0.3
1,812,920	-		MPMX19_01721	0.14	-1.1
1,812,920	-		MPMX19_01721	0.14	+0.9
1,812,920	-		MPMX19_01721	0.14	-1.3
1,812,920	-		MPMX19_01721	0.14	+0.4
1,812,920	-		MPMX19_01721	0.14	-2.0
1,812,920	-		MPMX19_01721	0.14	-2.1
1,812,920	-		MPMX19_01721	0.14	-0.9
1,812,920	-		MPMX19_01721	0.14	-0.6
1,812,920	-		MPMX19_01721	0.14	-0.1
1,812,920	-		MPMX19_01721	0.14	-0.4
1,812,920	-		MPMX19_01721	0.14	+0.6
1,812,920	-		MPMX19_01721	0.14	+0.9
1,812,920	-		MPMX19_01721	0.14	-0.1
1,812,920	-		MPMX19_01721	0.14	-0.7
1,812,920	-		MPMX19_01721	0.14	-0.8
1,812,920	-		MPMX19_01721	0.14	-1.8
1,812,961	+		MPMX19_01721	0.19	-1.5
1,813,003	+		MPMX19_01721	0.24	-2.5
1,813,003	+		MPMX19_01721	0.24	-1.0
1,813,003	+		MPMX19_01721	0.24	-0.5
1,813,003	+		MPMX19_01721	0.24	-0.5
1,813,003	+		MPMX19_01721	0.24	-0.7
1,813,003	+		MPMX19_01721	0.24	+0.1
1,813,003	+		MPMX19_01721	0.24	-0.5
1,813,003	+		MPMX19_01721	0.24	-1.4
1,813,003	+		MPMX19_01721	0.24	-0.1
1,813,003	+		MPMX19_01721	0.24	+0.4
1,813,003	+		MPMX19_01721	0.24	-0.9
1,813,003	+		MPMX19_01721	0.24	-2.1
1,813,004	-		MPMX19_01721	0.24	+0.1
1,813,004	-		MPMX19_01721	0.24	+1.4
1,813,004	-		MPMX19_01721	0.24	+0.6
1,813,004	-		MPMX19_01721	0.24	-0.8
1,813,004	-		MPMX19_01721	0.24	-2.2
1,813,004	-		MPMX19_01721	0.24	-0.6
1,813,004	-		MPMX19_01721	0.24	-1.1
1,813,063	+		MPMX19_01721	0.31	-0.8
1,813,063	+		MPMX19_01721	0.31	-1.2
1,813,063	+		MPMX19_01721	0.31	+0.6
1,813,063	+		MPMX19_01721	0.31	-1.5
1,813,063	+		MPMX19_01721	0.31	-1.2
1,813,063	+		MPMX19_01721	0.31	-0.2
1,813,064	-		MPMX19_01721	0.31	+0.0
1,813,064	-		MPMX19_01721	0.31	-0.6