Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01713

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,804,916	+		MPMX19_01712	0.21	+0.0
1,804,916	+		MPMX19_01712	0.21	+0.5
1,804,916	+		MPMX19_01712	0.21	+0.9
1,804,916	+		MPMX19_01712	0.21	-1.2
1,804,916	+		MPMX19_01712	0.21	-1.1
1,804,916	+		MPMX19_01712	0.21	-1.6
1,804,916	+		MPMX19_01712	0.21	+0.8
1,804,916	+		MPMX19_01712	0.21	+1.2
1,804,917	-		MPMX19_01712	0.21	-1.5
1,804,917	-		MPMX19_01712	0.21	-0.4
1,804,917	-		MPMX19_01712	0.21	-1.5
1,804,917	-		MPMX19_01712	0.21	-0.8
1,804,917	-		MPMX19_01712	0.21	+0.6
1,804,917	-		MPMX19_01712	0.21	-1.2
1,804,918	+		MPMX19_01712	0.21	+0.3
1,804,918	+		MPMX19_01712	0.21	-2.0
1,804,918	+		MPMX19_01712	0.21	-0.9
1,804,918	+		MPMX19_01712	0.21	+0.2
1,804,918	+		MPMX19_01712	0.21	-0.8
1,804,918	+		MPMX19_01712	0.21	+0.0
1,804,918	+		MPMX19_01712	0.21	+0.6
1,804,918	+		MPMX19_01712	0.21	-0.7
1,804,918	+		MPMX19_01712	0.21	-0.2
1,804,918	+		MPMX19_01712	0.21	-0.4
1,804,918	+		MPMX19_01712	0.21	+0.7
1,804,918	+		MPMX19_01712	0.21	-2.5
1,804,918	+		MPMX19_01712	0.21	-1.0
1,804,918	+		MPMX19_01712	0.21	+0.9
1,804,918	+		MPMX19_01712	0.21	+0.2
1,804,918	+		MPMX19_01712	0.21	+0.7
1,804,919	-		MPMX19_01712	0.21	+0.6
1,804,919	-		MPMX19_01712	0.21	-0.1
1,804,919	-		MPMX19_01712	0.21	-0.1
1,804,919	-		MPMX19_01712	0.21	-0.4
1,804,919	-		MPMX19_01712	0.21	+0.1
1,804,919	-		MPMX19_01712	0.21	-1.8
1,804,919	-		MPMX19_01712	0.21	-0.7
1,804,919	-		MPMX19_01712	0.21	+0.4
1,804,919	-		MPMX19_01712	0.21	+0.8
1,804,919	-		MPMX19_01712	0.21	-0.2
1,804,919	-		MPMX19_01712	0.21	-0.4
1,804,919	-		MPMX19_01712	0.21	-0.2
1,804,919	-		MPMX19_01712	0.21	-0.3
1,804,919	-		MPMX19_01712	0.21	+0.9
1,804,919	-		MPMX19_01712	0.21	+0.9
1,804,919	-		MPMX19_01712	0.21	-0.4
1,804,919	-		MPMX19_01712	0.21	-0.5
1,804,919	-		MPMX19_01712	0.21	-0.7
1,804,919	-		MPMX19_01712	0.21	-0.5
1,804,919	-		MPMX19_01712	0.21	-0.4
1,804,919	-		MPMX19_01712	0.21	-0.2
1,804,924	+		MPMX19_01712	0.22	+1.6
1,804,925	-		MPMX19_01712	0.22	+1.5
1,804,937	+		MPMX19_01712	0.23	-0.4
1,804,937	+		MPMX19_01712	0.23	-0.2
1,804,937	+		MPMX19_01712	0.23	-0.9
1,804,937	+		MPMX19_01712	0.23	-1.2
1,804,937	+		MPMX19_01712	0.23	-0.3
1,804,938	-		MPMX19_01712	0.23	+0.2
1,804,938	-		MPMX19_01712	0.23	-2.6
1,804,938	-		MPMX19_01712	0.23	+0.0
1,804,938	-		MPMX19_01712	0.23	-0.8
1,804,938	-		MPMX19_01712	0.23	-0.8
1,805,053	+		MPMX19_01712	0.34	+1.2
1,805,054	-		MPMX19_01712	0.34	-0.1
1,805,054	-		MPMX19_01712	0.34	-0.4
1,805,151	+		MPMX19_01712	0.43	-1.5
1,805,151	+		MPMX19_01712	0.43	+0.2
1,805,151	+		MPMX19_01712	0.43	+0.4
1,805,152	-		MPMX19_01712	0.43	+0.6
1,805,152	-		MPMX19_01712	0.43	-0.7
1,805,214	+		MPMX19_01712	0.49	+0.0
1,805,275	+		MPMX19_01712	0.54	-0.7
1,805,275	+		MPMX19_01712	0.54	+1.0
1,805,275	+		MPMX19_01712	0.54	-1.1
1,805,275	+		MPMX19_01712	0.54	-0.6
1,805,275	+		MPMX19_01712	0.54	+0.6
1,805,275	+		MPMX19_01712	0.54	+0.2
1,805,275	+		MPMX19_01712	0.54	-0.1
1,805,275	+		MPMX19_01712	0.54	-0.8
1,805,275	+		MPMX19_01712	0.54	+0.0
1,805,276	-		MPMX19_01712	0.55	-0.1
1,805,276	-		MPMX19_01712	0.55	+0.9
1,805,276	-		MPMX19_01712	0.55	+0.4
1,805,276	-		MPMX19_01712	0.55	-1.1
1,805,276	-		MPMX19_01712	0.55	-0.4
1,805,276	-		MPMX19_01712	0.55	-0.6
1,805,276	-		MPMX19_01712	0.55	-2.0
1,805,276	-		MPMX19_01712	0.55	+0.4
1,805,276	-		MPMX19_01712	0.55	-0.1
1,805,276	-		MPMX19_01712	0.55	-0.9
1,805,276	-		MPMX19_01712	0.55	-0.7
1,805,276	-		MPMX19_01712	0.55	-0.7
1,805,276	-		MPMX19_01712	0.55	-0.4
1,805,276	-		MPMX19_01712	0.55	-0.4
1,805,299	+		MPMX19_01712	0.57	-0.4
1,805,299	+		MPMX19_01712	0.57	-1.5
1,805,299	+		MPMX19_01712	0.57	-0.3
1,805,299	+		MPMX19_01712	0.57	-0.9
1,805,299	+		MPMX19_01712	0.57	+0.6
1,805,299	+		MPMX19_01712	0.57	-1.2
1,805,299	+		MPMX19_01712	0.57	+0.2
1,805,299	+		MPMX19_01712	0.57	-2.2
1,805,299	+		MPMX19_01712	0.57	+0.9
1,805,299	+		MPMX19_01712	0.57	+0.5
1,805,299	+		MPMX19_01712	0.57	-0.8
1,805,299	+		MPMX19_01712	0.57	+0.6
1,805,299	+		MPMX19_01712	0.57	-0.8
1,805,299	+		MPMX19_01712	0.57	-2.0
1,805,299	+		MPMX19_01712	0.57	-0.5
1,805,299	+		MPMX19_01712	0.57	+0.3
1,805,299	+		MPMX19_01712	0.57	+0.1
1,805,299	+		MPMX19_01712	0.57	+0.0
1,805,299	+		MPMX19_01712	0.57	-1.2
1,805,299	+		MPMX19_01712	0.57	-0.9
1,805,299	+		MPMX19_01712	0.57	+0.2
1,805,299	+		MPMX19_01712	0.57	-0.1
1,805,299	+		MPMX19_01712	0.57	+0.8
1,805,300	-		MPMX19_01712	0.57	-0.4
1,805,300	-		MPMX19_01712	0.57	-0.3
1,805,300	-		MPMX19_01712	0.57	-0.0
1,805,300	-		MPMX19_01712	0.57	-0.1
1,805,300	-		MPMX19_01712	0.57	-0.4
1,805,300	-		MPMX19_01712	0.57	-0.5
1,805,300	-		MPMX19_01712	0.57	+0.3
1,805,300	-		MPMX19_01712	0.57	-0.4
1,805,300	-		MPMX19_01712	0.57	-1.0
1,805,300	-		MPMX19_01712	0.57	-0.6
1,805,300	-		MPMX19_01712	0.57	-1.0
1,805,300	-		MPMX19_01712	0.57	-0.6
1,805,300	-		MPMX19_01712	0.57	-1.4
1,805,300	-		MPMX19_01712	0.57	-1.5
1,805,300	-		MPMX19_01712	0.57	+0.7
1,805,300	-		MPMX19_01712	0.57	-0.9
1,805,300	-		MPMX19_01712	0.57	+0.6
1,805,300	-		MPMX19_01712	0.57	+0.7
1,805,300	-		MPMX19_01712	0.57	-1.1
1,805,300	-		MPMX19_01712	0.57	-1.2
1,805,300	-		MPMX19_01712	0.57	+0.2
1,805,300	-		MPMX19_01712	0.57	-0.2
1,805,300	-		MPMX19_01712	0.57	-0.1
1,805,300	-		MPMX19_01712	0.57	+1.4
1,805,300	-		MPMX19_01712	0.57	-0.6
1,805,300	-		MPMX19_01712	0.57	-1.2
1,805,300	-		MPMX19_01712	0.57	-1.9
1,805,300	-		MPMX19_01712	0.57	+0.0
1,805,300	-		MPMX19_01712	0.57	-0.6
1,805,300	-		MPMX19_01712	0.57	-0.5
1,805,300	-		MPMX19_01712	0.57	+0.2
1,805,300	-		MPMX19_01712	0.57	+0.0
1,805,300	-		MPMX19_01712	0.57	+0.1
1,805,300	-		MPMX19_01712	0.57	-0.4
1,805,300	-		MPMX19_01712	0.57	-0.6
1,805,300	-		MPMX19_01712	0.57	-2.0
1,805,300	-		MPMX19_01712	0.57	-2.2
1,805,300	-		MPMX19_01712	0.57	-0.6
1,805,300	-		MPMX19_01712	0.57	-1.0
1,805,437	+		MPMX19_01712	0.69	-0.8
1,805,437	+		MPMX19_01712	0.69	+0.2
1,805,437	+		MPMX19_01712	0.69	-0.2
1,805,437	+		MPMX19_01712	0.69	+0.7
1,805,437	+		MPMX19_01712	0.69	-2.1
1,805,437	+		MPMX19_01712	0.69	-0.2
1,805,437	+		MPMX19_01712	0.69	-0.1
1,805,437	+		MPMX19_01712	0.69	+0.0
1,805,437	+		MPMX19_01712	0.69	-1.1
1,805,437	+		MPMX19_01712	0.69	-1.3
1,805,437	+		MPMX19_01712	0.69	+0.4
1,805,437	+		MPMX19_01712	0.69	-0.5
1,805,437	+		MPMX19_01712	0.69	-1.0
1,805,437	+		MPMX19_01712	0.69	-1.7
1,805,438	-		MPMX19_01712	0.70	-2.5
1,805,438	-		MPMX19_01712	0.70	-0.7
1,805,438	-		MPMX19_01712	0.70	-0.3
1,805,438	-		MPMX19_01712	0.70	-0.6
1,805,438	-		MPMX19_01712	0.70	-0.3
1,805,438	-		MPMX19_01712	0.70	+0.5
1,805,438	-		MPMX19_01712	0.70	-0.5
1,805,438	-		MPMX19_01712	0.70	-0.2
1,805,438	-		MPMX19_01712	0.70	+0.0
1,805,438	-		MPMX19_01712	0.70	-0.9
1,805,438	-		MPMX19_01712	0.70	+0.8
1,805,623	+		MPMX19_01712	0.87	-1.3
1,805,623	+		MPMX19_01712	0.87	-1.6
1,805,623	+		MPMX19_01712	0.87	-1.8
1,805,623	+		MPMX19_01712	0.87	-0.8
1,805,623	+		MPMX19_01712	0.87	+0.4
1,805,623	+		MPMX19_01712	0.87	-0.2
1,805,623	+		MPMX19_01712	0.87	+0.7
1,805,623	+		MPMX19_01712	0.87	-1.0
1,805,623	+		MPMX19_01712	0.87	-0.3
1,805,623	+		MPMX19_01712	0.87	-1.4
1,805,623	+		MPMX19_01712	0.87	-0.1
1,805,623	+		MPMX19_01712	0.87	+0.1
1,805,624	-		MPMX19_01712	0.87	-1.0
1,805,624	-		MPMX19_01712	0.87	-1.1
1,805,624	-		MPMX19_01712	0.87	-0.1
1,805,624	-		MPMX19_01712	0.87	-0.7
1,805,624	-		MPMX19_01712	0.87	+0.8
1,805,624	-		MPMX19_01712	0.87	-0.2
1,805,624	-		MPMX19_01712	0.87	-1.5
1,805,624	-		MPMX19_01712	0.87	+0.0
1,805,624	-		MPMX19_01712	0.87	-1.2
1,805,624	-		MPMX19_01712	0.87	+0.0
1,805,624	-		MPMX19_01712	0.87	-0.5
1,805,713	+				-2.1
1,805,713	+				-1.0
1,805,713	+				+0.0
1,805,713	+				+1.2
1,805,713	+				-1.5
1,805,713	+				+0.7
1,805,713	+				+0.8
1,805,713	+				-0.1
1,805,713	+				-0.7
1,805,713	+				-0.0
1,805,713	+				-0.5
1,805,713	+				+0.3
1,805,713	+				-0.9
1,805,713	+				+0.5
1,805,713	+				-0.9
1,805,714	-				+0.2
1,805,714	-				-0.9
1,805,714	-				-0.5
1,805,714	-				-0.6
1,805,714	-				-0.5
1,805,714	-				-0.6
1,805,714	-				-1.1
1,805,714	-				-0.4
1,805,714	-				-0.1
1,805,714	-				-1.5
1,805,714	-				-1.0
1,805,714	-				-0.8
1,805,714	-				+0.0
1,805,714	-				+0.6
1,805,714	-				-0.9
1,805,714	-				-0.1
1,805,714	-				-0.9
1,805,714	-				-0.7
1,805,714	-				-0.7
1,805,714	-				-2.0
1,805,714	-				-0.4
1,805,714	-				+0.5
1,805,714	-				+1.6
1,805,714	-				+0.4
1,805,714	-				-0.6
1,805,714	-				-1.7
1,805,714	-				+1.9
1,806,202	+		MPMX19_01713	0.26	-1.4
1,806,202	+		MPMX19_01713	0.26	+0.0
1,806,202	+		MPMX19_01713	0.26	-0.3
1,806,202	+		MPMX19_01713	0.26	-0.1
1,806,202	+		MPMX19_01713	0.26	+0.3
1,806,202	+		MPMX19_01713	0.26	-1.0
1,806,202	+		MPMX19_01713	0.26	+0.8
1,806,202	+		MPMX19_01713	0.26	-0.5
1,806,203	-		MPMX19_01713	0.26	-0.3
1,806,203	-		MPMX19_01713	0.26	-0.2
1,806,203	-		MPMX19_01713	0.26	+0.3
1,806,203	-		MPMX19_01713	0.26	+0.8
1,806,203	-		MPMX19_01713	0.26	-1.5
1,806,203	-		MPMX19_01713	0.26	-1.2
1,806,203	-		MPMX19_01713	0.26	-0.2
1,806,203	-		MPMX19_01713	0.26	-1.5
1,806,259	+		MPMX19_01713	0.30	-0.5
1,806,259	+		MPMX19_01713	0.30	+0.9
1,806,259	+		MPMX19_01713	0.30	-2.4
1,806,260	-		MPMX19_01713	0.30	-0.6
1,806,557	+		MPMX19_01713	0.48	-0.3
1,806,557	+		MPMX19_01713	0.48	-0.6
1,806,557	+		MPMX19_01713	0.48	-0.9
1,806,557	+		MPMX19_01713	0.48	-0.1
1,806,557	+		MPMX19_01713	0.48	-1.4
1,806,557	+		MPMX19_01713	0.48	-0.8
1,806,557	+		MPMX19_01713	0.48	-2.6
1,806,557	+		MPMX19_01713	0.48	-1.2
1,806,557	+		MPMX19_01713	0.48	-1.0
1,806,557	+		MPMX19_01713	0.48	-1.1
1,806,557	+		MPMX19_01713	0.48	-0.5
1,806,558	-		MPMX19_01713	0.48	-0.3
1,806,558	-		MPMX19_01713	0.48	-1.4
1,806,558	-		MPMX19_01713	0.48	-1.3
1,806,558	-		MPMX19_01713	0.48	-1.8
1,806,558	-		MPMX19_01713	0.48	-0.6
1,806,558	-		MPMX19_01713	0.48	-0.1
1,806,558	-		MPMX19_01713	0.48	+0.0
1,806,558	-		MPMX19_01713	0.48	-0.3
1,806,558	-		MPMX19_01713	0.48	-1.4
1,806,558	-		MPMX19_01713	0.48	-1.8
1,806,558	-		MPMX19_01713	0.48	+0.5
1,806,558	-		MPMX19_01713	0.48	-0.2
1,806,571	-		MPMX19_01713	0.49	-0.3
1,806,763	+		MPMX19_01713	0.61	+0.0
1,806,763	+		MPMX19_01713	0.61	+0.0
1,806,763	+		MPMX19_01713	0.61	+0.1
1,806,763	+		MPMX19_01713	0.61	-1.2
1,806,763	+		MPMX19_01713	0.61	-1.0
1,806,763	+		MPMX19_01713	0.61	+0.7
1,806,763	+		MPMX19_01713	0.61	-0.3
1,806,763	+		MPMX19_01713	0.61	-2.0
1,806,763	+		MPMX19_01713	0.61	+0.3
1,806,763	+		MPMX19_01713	0.61	-0.3
1,806,763	+		MPMX19_01713	0.61	-2.4
1,806,763	+		MPMX19_01713	0.61	+1.4
1,806,763	+		MPMX19_01713	0.61	-1.4
1,806,763	+		MPMX19_01713	0.61	-1.1
1,806,763	+		MPMX19_01713	0.61	-1.0
1,806,763	+		MPMX19_01713	0.61	-1.6
1,806,763	+		MPMX19_01713	0.61	+0.9
1,806,763	+		MPMX19_01713	0.61	-2.0
1,806,763	+		MPMX19_01713	0.61	-1.5
1,806,764	-		MPMX19_01713	0.62	-0.5
1,806,764	-		MPMX19_01713	0.62	-0.9
1,806,764	-		MPMX19_01713	0.62	-0.7
1,806,764	-		MPMX19_01713	0.62	-0.9
1,806,764	-		MPMX19_01713	0.62	+0.2
1,806,764	-		MPMX19_01713	0.62	-0.5
1,806,764	-		MPMX19_01713	0.62	+0.0
1,806,764	-		MPMX19_01713	0.62	-0.5
1,806,764	-		MPMX19_01713	0.62	+0.9
1,806,764	-		MPMX19_01713	0.62	-0.2
1,806,764	-		MPMX19_01713	0.62	-1.1
1,806,764	-		MPMX19_01713	0.62	-0.9
1,806,764	-		MPMX19_01713	0.62	-2.6
1,806,764	-		MPMX19_01713	0.62	-0.1
1,806,764	-		MPMX19_01713	0.62	-1.3
1,806,764	-		MPMX19_01713	0.62	-0.8
1,806,764	-		MPMX19_01713	0.62	+0.4
1,806,764	-		MPMX19_01713	0.62	-0.1
1,806,964	+		MPMX19_01713	0.74	-0.1
1,806,964	+		MPMX19_01713	0.74	-0.5
1,806,965	-		MPMX19_01713	0.74	-1.2
1,806,965	-		MPMX19_01713	0.74	-0.4
1,807,183	+		MPMX19_01713	0.88	+0.0
1,807,183	+		MPMX19_01713	0.88	-1.3
1,807,183	+		MPMX19_01713	0.88	+0.0
1,807,183	+		MPMX19_01713	0.88	+0.0
1,807,183	+		MPMX19_01713	0.88	+0.1
1,807,183	+		MPMX19_01713	0.88	-0.7
1,807,183	+		MPMX19_01713	0.88	-1.1
1,807,183	+		MPMX19_01713	0.88	+0.6
1,807,183	+		MPMX19_01713	0.88	-2.5
1,807,183	+		MPMX19_01713	0.88	+0.5
1,807,183	+		MPMX19_01713	0.88	-0.2
1,807,183	+		MPMX19_01713	0.88	-3.4
1,807,183	+		MPMX19_01713	0.88	+0.3
1,807,184	-		MPMX19_01713	0.88	-0.6
1,807,184	-		MPMX19_01713	0.88	-0.8
1,807,184	-		MPMX19_01713	0.88	+0.8
1,807,184	-		MPMX19_01713	0.88	-0.4
1,807,184	-		MPMX19_01713	0.88	-0.3
1,807,184	-		MPMX19_01713	0.88	-0.6
1,807,348	+				+0.0
1,807,348	+				+0.4
1,807,348	+				+1.2
1,807,348	+				-0.1
1,807,348	+				-2.1
1,807,349	-				+0.0
1,807,349	-				-0.4
1,807,349	-				-0.5
1,807,349	-				-0.7
1,807,402	+				+0.8
1,807,402	+				-1.7
1,807,402	+				+0.2
1,807,402	+				-0.6
1,807,402	+				-0.5
1,807,403	-				-0.9
1,807,403	-				-0.0
1,807,403	-				-1.8
1,807,441	+				+1.6
1,807,441	+				+0.6
1,807,441	+				-2.2
1,807,441	+				+0.0
1,807,441	+				-0.4
1,807,441	+				+1.1
1,807,442	-				+0.0
1,807,442	-				-0.8
1,807,442	-				-0.6
1,807,658	+				-1.0
1,807,659	-				+0.3
1,808,279	+		MPMX19_01714	0.69	-1.8
1,808,279	+		MPMX19_01714	0.69	+0.6
1,808,279	+		MPMX19_01714	0.69	-1.0
1,808,279	+		MPMX19_01714	0.69	+0.0
1,808,280	-		MPMX19_01714	0.69	-0.4
1,808,280	-		MPMX19_01714	0.69	-2.0
1,808,281	+		MPMX19_01714	0.69	+0.6
1,808,282	-		MPMX19_01714	0.70	+0.6