Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01701

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,794,658	+		MPMX19_01700	0.28	-1.9
1,794,658	+		MPMX19_01700	0.28	+0.9
1,794,658	+		MPMX19_01700	0.28	-1.1
1,794,658	+		MPMX19_01700	0.28	+0.5
1,794,658	+		MPMX19_01700	0.28	+1.0
1,794,658	+		MPMX19_01700	0.28	+1.6
1,794,658	+		MPMX19_01700	0.28	+0.0
1,794,658	+		MPMX19_01700	0.28	+0.0
1,794,658	+		MPMX19_01700	0.28	+0.4
1,794,658	+		MPMX19_01700	0.28	-1.0
1,794,659	-		MPMX19_01700	0.28	-1.5
1,794,659	-		MPMX19_01700	0.28	-0.5
1,794,659	-		MPMX19_01700	0.28	-0.5
1,794,659	-		MPMX19_01700	0.28	-1.4
1,794,659	-		MPMX19_01700	0.28	-0.6
1,794,659	-		MPMX19_01700	0.28	-1.1
1,794,659	-		MPMX19_01700	0.28	+0.0
1,794,659	-		MPMX19_01700	0.28	-0.6
1,794,659	-		MPMX19_01700	0.28	-0.3
1,794,892	+		MPMX19_01700	0.49	-0.5
1,794,910	+		MPMX19_01700	0.51	+0.3
1,794,910	+		MPMX19_01700	0.51	-1.2
1,794,910	+		MPMX19_01700	0.51	-0.1
1,794,910	+		MPMX19_01700	0.51	-1.7
1,794,910	+		MPMX19_01700	0.51	-1.2
1,794,910	+		MPMX19_01700	0.51	-0.7
1,794,910	+		MPMX19_01700	0.51	-0.8
1,794,910	+		MPMX19_01700	0.51	-0.1
1,794,910	+		MPMX19_01700	0.51	+1.1
1,794,911	-		MPMX19_01700	0.51	-0.1
1,794,911	-		MPMX19_01700	0.51	+0.4
1,794,911	-		MPMX19_01700	0.51	+0.8
1,794,911	-		MPMX19_01700	0.51	-0.4
1,794,911	-		MPMX19_01700	0.51	+0.9
1,794,911	-		MPMX19_01700	0.51	+0.3
1,794,911	-		MPMX19_01700	0.51	-0.3
1,794,911	-		MPMX19_01700	0.51	-0.1
1,794,911	-		MPMX19_01700	0.51	-1.0
1,794,911	-		MPMX19_01700	0.51	+0.1
1,794,911	-		MPMX19_01700	0.51	-0.4
1,794,911	-		MPMX19_01700	0.51	-1.8
1,794,911	-		MPMX19_01700	0.51	+0.0
1,794,911	-		MPMX19_01700	0.51	+0.1
1,794,911	-		MPMX19_01700	0.51	-1.5
1,794,911	-		MPMX19_01700	0.51	+0.0
1,794,911	-		MPMX19_01700	0.51	+0.7
1,794,911	-		MPMX19_01700	0.51	+0.6
1,794,911	-		MPMX19_01700	0.51	-1.2
1,794,911	-		MPMX19_01700	0.51	+0.4
1,794,911	-		MPMX19_01700	0.51	-0.9
1,794,911	-		MPMX19_01700	0.51	+0.0
1,794,911	-		MPMX19_01700	0.51	-0.5
1,794,911	-		MPMX19_01700	0.51	+0.3
1,794,911	-		MPMX19_01700	0.51	-0.4
1,794,911	-		MPMX19_01700	0.51	-0.9
1,794,911	-		MPMX19_01700	0.51	+2.0
1,794,911	-		MPMX19_01700	0.51	+0.2
1,795,159	+		MPMX19_01700	0.73	+1.5
1,795,160	-		MPMX19_01700	0.73	-0.7
1,795,160	-		MPMX19_01700	0.73	-0.5
1,795,172	+		MPMX19_01700	0.74	-1.0
1,795,172	+		MPMX19_01700	0.74	-0.5
1,795,172	+		MPMX19_01700	0.74	-0.3
1,795,172	+		MPMX19_01700	0.74	-0.2
1,795,172	+		MPMX19_01700	0.74	-0.3
1,795,172	+		MPMX19_01700	0.74	+1.2
1,795,172	+		MPMX19_01700	0.74	+0.0
1,795,172	+		MPMX19_01700	0.74	-1.7
1,795,172	+		MPMX19_01700	0.74	-0.4
1,795,172	+		MPMX19_01700	0.74	-1.7
1,795,172	+		MPMX19_01700	0.74	+2.6
1,795,172	+		MPMX19_01700	0.74	+0.3
1,795,172	+		MPMX19_01700	0.74	+0.6
1,795,172	+		MPMX19_01700	0.74	-0.4
1,795,172	+		MPMX19_01700	0.74	+1.0
1,795,173	-		MPMX19_01700	0.75	-1.7
1,795,173	-		MPMX19_01700	0.75	-0.7
1,795,173	-		MPMX19_01700	0.75	+0.1
1,795,173	-		MPMX19_01700	0.75	+0.4
1,795,173	-		MPMX19_01700	0.75	-2.3
1,795,173	-		MPMX19_01700	0.75	+0.4
1,795,173	-		MPMX19_01700	0.75	+0.2
1,795,173	-		MPMX19_01700	0.75	-1.0
1,795,173	-		MPMX19_01700	0.75	-0.2
1,795,173	-		MPMX19_01700	0.75	+1.0
1,795,173	-		MPMX19_01700	0.75	-0.4
1,795,173	-		MPMX19_01700	0.75	-0.6
1,795,173	-		MPMX19_01700	0.75	-1.0
1,795,173	-		MPMX19_01700	0.75	-0.7
1,795,173	-		MPMX19_01700	0.75	-1.4
1,795,173	-		MPMX19_01700	0.75	-0.6
1,795,173	-		MPMX19_01700	0.75	+0.0
1,795,173	-		MPMX19_01700	0.75	+1.1
1,795,173	-		MPMX19_01700	0.75	+1.2
1,795,173	-		MPMX19_01700	0.75	-2.3
1,795,196	+		MPMX19_01700	0.77	+1.0
1,795,264	-		MPMX19_01700	0.83	-2.0
1,795,415	+				+0.4
1,795,416	-				-2.5
1,795,416	-				+0.2
1,795,416	-				+0.2
1,795,458	+				-0.2
1,795,458	+				-2.1
1,795,458	+				-0.1
1,795,458	+				-0.5
1,795,458	+				+0.2
1,795,458	+				-2.2
1,795,458	+				-1.3
1,795,459	-				+0.9
1,795,459	-				-0.3
1,795,459	-				+0.4
1,795,459	-				+1.0
1,795,459	-				-0.6
1,795,492	+				-1.4
1,795,492	+				-0.1
1,795,492	+				-0.4
1,795,492	+				+1.4
1,795,492	+				+0.4
1,795,493	-				-0.4
1,795,493	-				+0.0
1,795,493	-				-0.7
1,795,493	-				-1.2
1,795,493	-				+0.3
1,795,493	-				-2.1
1,795,493	-				+0.3
1,795,567	+				-0.1
1,795,567	+				-0.6
1,795,567	+				-2.3
1,795,567	+				+1.4
1,795,567	+				+0.3
1,795,568	-				+0.4
1,795,568	-				-0.1
1,795,568	-				-0.1
1,795,666	+				+0.0
1,795,666	+				-1.6
1,795,666	+				+0.0
1,795,666	+				-0.9
1,795,667	-				-0.7
1,795,667	-				-1.1
1,795,667	-				-2.1
1,795,667	-				+1.3
1,795,667	-				+0.1
1,795,667	-				+0.6
1,795,667	-				-0.7
1,795,667	-				-0.8
1,795,667	-				-1.0
1,795,696	-				-1.2
1,795,696	-				+0.0
1,796,023	+		MPMX19_01701	0.19	+0.6
1,796,023	+		MPMX19_01701	0.19	+0.4
1,796,023	+		MPMX19_01701	0.19	-1.0
1,796,023	+		MPMX19_01701	0.19	+0.2
1,796,023	+		MPMX19_01701	0.19	-0.6
1,796,023	+		MPMX19_01701	0.19	+0.9
1,796,023	+		MPMX19_01701	0.19	+0.6
1,796,023	+		MPMX19_01701	0.19	-1.4
1,796,024	-		MPMX19_01701	0.19	+0.3
1,796,024	-		MPMX19_01701	0.19	+0.7
1,796,024	-		MPMX19_01701	0.19	-1.1
1,796,024	-		MPMX19_01701	0.19	+0.4
1,796,024	-		MPMX19_01701	0.19	-0.7
1,796,024	-		MPMX19_01701	0.19	-0.4
1,796,034	+		MPMX19_01701	0.19	-0.8
1,796,034	+		MPMX19_01701	0.19	+0.4
1,796,034	+		MPMX19_01701	0.19	-0.5
1,796,034	+		MPMX19_01701	0.19	+0.4
1,796,034	+		MPMX19_01701	0.19	+0.4
1,796,034	+		MPMX19_01701	0.19	-1.2
1,796,034	+		MPMX19_01701	0.19	+0.5
1,796,034	+		MPMX19_01701	0.19	+0.2
1,796,034	+		MPMX19_01701	0.19	+0.3
1,796,034	+		MPMX19_01701	0.19	+0.2
1,796,034	+		MPMX19_01701	0.19	-0.3
1,796,034	+		MPMX19_01701	0.19	-1.0
1,796,034	+		MPMX19_01701	0.19	-0.1
1,796,034	+		MPMX19_01701	0.19	+0.5
1,796,034	+		MPMX19_01701	0.19	-0.8
1,796,034	+		MPMX19_01701	0.19	-0.6
1,796,034	+		MPMX19_01701	0.19	-0.3
1,796,035	-		MPMX19_01701	0.19	+1.2
1,796,035	-		MPMX19_01701	0.19	-0.6
1,796,035	-		MPMX19_01701	0.19	-0.6
1,796,035	-		MPMX19_01701	0.19	+0.8
1,796,035	-		MPMX19_01701	0.19	-1.6
1,796,035	-		MPMX19_01701	0.19	+0.3
1,796,035	-		MPMX19_01701	0.19	-0.6
1,796,035	-		MPMX19_01701	0.19	+0.6
1,796,035	-		MPMX19_01701	0.19	-1.1
1,796,035	-		MPMX19_01701	0.19	-0.8
1,796,035	-		MPMX19_01701	0.19	+0.8
1,796,035	-		MPMX19_01701	0.19	-0.3
1,796,082	+		MPMX19_01701	0.21	+0.2
1,796,293	+		MPMX19_01701	0.30	-0.6
1,796,294	-		MPMX19_01701	0.30	+0.6
1,796,294	-		MPMX19_01701	0.30	-0.2
1,796,294	-		MPMX19_01701	0.30	+0.4
1,796,294	-		MPMX19_01701	0.30	+0.8
1,796,458	+		MPMX19_01701	0.37	+0.2
1,796,458	+		MPMX19_01701	0.37	-1.5
1,796,459	-		MPMX19_01701	0.37	+0.2
1,797,597	+		MPMX19_01701	0.84	-1.8
1,797,597	+		MPMX19_01701	0.84	-0.1
1,797,597	+		MPMX19_01701	0.84	+0.0
1,797,597	+		MPMX19_01701	0.84	+0.4
1,797,598	-		MPMX19_01701	0.84	+0.8
1,797,598	-		MPMX19_01701	0.84	-0.3
1,797,598	-		MPMX19_01701	0.84	-1.0
1,797,598	-		MPMX19_01701	0.84	-1.7
1,797,598	-		MPMX19_01701	0.84	+0.4
1,797,598	-		MPMX19_01701	0.84	-0.6
1,797,598	-		MPMX19_01701	0.84	-1.0
1,797,965	+				-0.7
1,797,965	+				-0.3
1,797,965	+				+0.3
1,797,965	+				-0.4
1,797,965	+				-1.6
1,797,965	+				-0.7
1,797,965	+				+0.5
1,797,965	+				+0.0
1,797,965	+				-0.6
1,797,966	-				-0.0
1,797,966	-				+1.6
1,797,966	-				-0.9
1,797,966	-				-0.8
1,797,966	-				-2.2
1,797,966	-				+0.3
1,797,966	-				-0.7
1,797,966	-				-0.3
1,797,966	-				+1.0
1,797,966	-				-0.1
1,797,966	-				-0.6
1,797,966	-				+0.0
1,797,966	-				-1.6
1,797,966	-				-1.4
1,797,966	-				-1.2
1,797,966	-				-0.1
1,797,966	-				-1.1
1,797,966	-				-0.7
1,797,966	-				+0.1
1,797,966	-				-0.5
1,797,966	-				-0.5
1,797,966	-				-0.1
1,797,999	+				+0.9
1,797,999	+				-1.1
1,798,091	+		MPMX19_01702	0.12	-1.0
1,798,092	-		MPMX19_01702	0.12	+0.6
1,798,427	+		MPMX19_01702	0.82	-0.4
1,798,428	-		MPMX19_01702	0.82	-0.0
1,798,428	-		MPMX19_01702	0.82	-0.1
1,798,428	-		MPMX19_01702	0.82	-1.3
1,798,428	-		MPMX19_01702	0.82	-1.2
1,798,428	-		MPMX19_01702	0.82	+0.2
1,798,516	+				-1.7
1,798,516	+				-2.3
1,798,516	+				-0.2
1,798,517	-				-1.0
1,798,517	-				-0.6
1,798,517	-				-0.8
1,798,620	+				+1.1
1,798,620	+				-0.3
1,798,620	+				+0.9
1,798,620	+				-0.3
1,798,620	+				+1.3
1,798,620	+				-1.6
1,798,620	+				-0.9
1,798,620	+				-1.2
1,798,620	+				-1.4
1,798,621	-				-1.2
1,798,621	-				-0.4
1,798,621	-				-0.5
1,798,621	-				+0.9
1,798,621	-				+1.6
1,798,621	-				-1.4
1,798,661	+				+0.3
1,798,661	+				-0.1
1,798,661	+				-0.4
1,798,661	+				-1.0
1,798,661	+				-0.5
1,798,662	-				-0.2
1,798,687	+				-0.5
1,798,687	+				-0.4
1,798,687	+				+0.5
1,798,687	+				-1.0
1,798,688	-				-1.0
1,798,688	-				-2.0
1,798,688	-				+1.2
1,798,739	+		MPMX19_01703	0.27	-0.9
1,798,739	+		MPMX19_01703	0.27	-0.4
1,798,740	-		MPMX19_01703	0.27	-1.6
1,798,740	-		MPMX19_01703	0.27	+1.6
1,798,916	+				-0.9
1,798,916	+				-0.7
1,798,916	+				-0.8
1,798,916	+				-1.1
1,798,916	+				+0.1
1,798,916	+				-1.6
1,798,917	-				-0.1
1,798,917	-				-0.8
1,798,917	-				-0.6
1,798,917	-				-0.7
1,798,917	-				-1.2
1,798,917	-				-1.6
1,798,917	-				+0.2
1,798,917	-				+0.3
1,798,917	-				+0.1
1,798,917	-				-1.1
1,798,917	-				-0.6
1,798,917	-				-0.1