Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01688

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,777,495	+				-2.5
1,777,495	+				-2.0
1,777,496	-				-1.2
1,777,581	+				-0.6
1,777,581	+				-0.3
1,777,581	+				+0.8
1,777,581	+				+0.0
1,777,581	+				-1.0
1,777,582	-				-1.8
1,777,582	-				-1.0
1,777,582	-				-1.0
1,777,582	-				-0.2
1,777,582	-				-0.4
1,777,750	+				+1.0
1,777,862	+				-1.7
1,777,862	+				-0.9
1,777,862	+				-1.7
1,777,862	+				-0.3
1,777,862	+				+1.0
1,777,863	-				+0.0
1,777,863	-				-0.6
1,777,863	-				-1.1
1,777,863	-				-3.4
1,777,863	-				-1.0
1,777,976	+		MPMX19_01687	0.36	-0.1
1,777,976	+		MPMX19_01687	0.36	-0.9
1,777,976	+		MPMX19_01687	0.36	+0.3
1,777,976	+		MPMX19_01687	0.36	-0.5
1,777,977	-		MPMX19_01687	0.36	-0.7
1,777,977	-		MPMX19_01687	0.36	-1.5
1,777,977	-		MPMX19_01687	0.36	+0.0
1,778,036	+		MPMX19_01687	0.50	-2.1
1,778,036	+		MPMX19_01687	0.50	-2.1
1,778,037	-		MPMX19_01687	0.50	+0.0
1,778,037	-		MPMX19_01687	0.50	-0.4
1,778,088	-		MPMX19_01687	0.63	-1.5
1,778,088	-		MPMX19_01687	0.63	-0.5
1,778,088	-		MPMX19_01687	0.63	-1.2
1,778,088	-		MPMX19_01687	0.63	-1.5
1,778,088	-		MPMX19_01687	0.63	-0.7
1,778,150	+		MPMX19_01687	0.77	-0.0
1,778,150	+		MPMX19_01687	0.77	-0.5
1,778,150	+		MPMX19_01687	0.77	-0.8
1,778,150	+		MPMX19_01687	0.77	-0.8
1,778,150	+		MPMX19_01687	0.77	-1.6
1,778,150	+		MPMX19_01687	0.77	+0.0
1,778,150	+		MPMX19_01687	0.77	+0.0
1,778,150	+		MPMX19_01687	0.77	-0.4
1,778,150	+		MPMX19_01687	0.77	-0.1
1,778,150	+		MPMX19_01687	0.77	+0.0
1,778,150	+		MPMX19_01687	0.77	-0.3
1,778,150	+		MPMX19_01687	0.77	-0.4
1,778,150	+		MPMX19_01687	0.77	-1.5
1,778,151	-		MPMX19_01687	0.78	-2.1
1,778,151	-		MPMX19_01687	0.78	-3.2
1,778,151	-		MPMX19_01687	0.78	-1.3
1,778,151	-		MPMX19_01687	0.78	-0.4
1,778,151	-		MPMX19_01687	0.78	-1.0
1,778,151	-		MPMX19_01687	0.78	-0.0
1,778,151	-		MPMX19_01687	0.78	-1.5
1,778,151	-		MPMX19_01687	0.78	-1.0
1,778,151	-		MPMX19_01687	0.78	-0.4
1,778,151	-		MPMX19_01687	0.78	+0.6
1,778,151	-		MPMX19_01687	0.78	+0.3
1,778,151	-		MPMX19_01687	0.78	-0.9
1,778,151	-		MPMX19_01687	0.78	-1.5
1,778,151	-		MPMX19_01687	0.78	-0.7
1,778,151	-		MPMX19_01687	0.78	+0.6
1,778,151	-		MPMX19_01687	0.78	+0.0
1,778,363	+				+0.3
1,778,363	+				+1.3
1,778,363	+				-1.1
1,778,363	+				-1.3
1,778,363	+				-0.8
1,778,363	+				-2.5
1,778,364	-				-0.5
1,778,364	-				-0.5
1,778,365	+				+0.0
1,778,365	+				-0.8
1,778,365	+				+0.2
1,778,365	+				-1.6
1,778,366	-				-1.3
1,778,366	-				-1.2
1,778,366	-				-0.9
1,780,875	-				-0.4
1,780,939	+				-0.5
1,780,939	+				-1.8
1,780,939	+				-0.1
1,780,939	+				-1.8
1,780,939	+				-0.1
1,780,939	+				-1.0
1,780,939	+				-0.3
1,780,939	+				-0.2
1,780,939	+				+1.1
1,780,939	+				+0.2
1,780,939	+				-0.2
1,780,939	+				-0.1
1,780,939	+				-1.1
1,780,940	-				-0.8
1,780,940	-				+0.6
1,780,940	-				-0.1
1,780,940	-				+0.4
1,780,940	-				+0.6
1,780,947	+				-1.4
1,780,947	+				+0.4
1,780,947	+				+0.3
1,780,947	+				+0.9
1,780,947	+				+0.1
1,780,947	+				-0.6
1,780,947	+				+0.3
1,780,947	+				-1.0
1,780,947	+				-0.2
1,780,947	+				-0.2
1,780,947	+				-0.6
1,780,947	+				+0.6
1,780,947	+				-0.3
1,780,947	+				+1.6
1,780,947	+				-1.7
1,780,947	+				+1.0
1,780,947	+				+0.0
1,780,947	+				+0.4
1,780,947	+				-0.1
1,780,947	+				+0.5
1,780,948	-				-0.1
1,780,948	-				-0.4
1,780,948	-				-0.8
1,780,948	-				-1.0
1,780,948	-				-0.4
1,780,948	-				-1.2
1,780,948	-				-2.8
1,780,948	-				+0.3
1,780,948	-				-1.0
1,780,948	-				-1.4
1,780,948	-				-1.7
1,780,949	+				-0.8
1,780,949	+				-0.9
1,780,949	+				-0.5
1,780,949	+				+0.6
1,780,949	+				+0.9
1,780,949	+				-1.1
1,780,949	+				+0.3
1,780,949	+				+1.2
1,780,949	+				+0.4
1,780,949	+				-0.2
1,780,949	+				-1.1
1,780,949	+				-0.1
1,780,949	+				-0.2
1,780,949	+				-1.8
1,780,949	+				-0.7
1,780,949	+				+0.6
1,780,949	+				-0.2
1,780,949	+				+1.2
1,780,949	+				-0.9
1,780,949	+				-0.9
1,780,950	-				-0.2
1,780,950	-				-0.3
1,780,950	-				-0.5
1,780,950	-				-0.4
1,780,950	-				+1.0
1,780,950	-				-0.4
1,780,950	-				+0.2
1,780,950	-				-0.4
1,780,950	-				-0.3
1,780,950	-				+0.2
1,780,950	-				+1.0
1,780,950	-				-1.6
1,780,950	-				-1.4
1,780,950	-				+0.0
1,780,950	-				+0.5
1,780,950	-				-0.1
1,780,950	-				-0.7
1,780,950	-				-0.4
1,780,950	-				+0.6
1,780,950	-				+1.8
1,780,950	-				+0.6
1,780,950	-				+0.2
1,780,951	+				+1.4
1,780,951	+				-1.1
1,780,951	+				-1.1
1,780,951	+				-0.3
1,780,951	+				-1.0
1,780,951	+				-2.1
1,780,951	+				-0.8
1,780,951	+				-0.8
1,780,951	+				-0.3
1,780,951	+				-1.8
1,780,951	+				-0.2
1,780,951	+				+0.1
1,780,951	+				-0.8
1,780,951	+				-0.7
1,780,951	+				+1.6
1,780,951	+				-0.6
1,780,951	+				+0.0
1,780,951	+				-0.7
1,780,951	+				-0.8
1,780,951	+				-0.9
1,780,951	+				+0.8
1,780,951	+				+0.2
1,780,951	+				-0.5
1,780,951	+				+0.2
1,780,951	+				+0.2
1,780,951	+				-0.6
1,780,951	+				-0.8
1,780,951	+				-1.1
1,780,951	+				-2.2
1,780,951	+				-0.5
1,780,951	+				+1.0
1,780,951	+				-0.5
1,780,951	+				+0.5
1,780,951	+				-1.2
1,780,951	+				-0.0
1,780,951	+				-0.1
1,780,951	+				-0.7
1,780,951	+				-1.8
1,780,951	+				-0.1
1,780,951	+				-1.7
1,780,951	+				+1.2
1,780,951	+				-1.5
1,780,951	+				+0.3
1,780,951	+				-0.4
1,780,951	+				+0.5
1,780,951	+				-1.2
1,780,951	+				-0.1
1,780,951	+				-1.1
1,780,952	-				+0.9
1,780,952	-				+0.6
1,780,952	-				-0.1
1,780,952	-				-1.0
1,780,952	-				-0.2
1,780,952	-				-1.6
1,780,952	-				-0.4
1,780,952	-				-0.1
1,780,952	-				+0.8
1,780,952	-				-1.8
1,780,952	-				+0.6
1,780,952	-				-1.1
1,780,952	-				+0.4
1,780,952	-				-1.3
1,780,952	-				+0.2
1,780,952	-				+2.0
1,780,952	-				+1.6
1,780,952	-				+0.7
1,780,952	-				-0.6
1,780,952	-				-2.2
1,780,952	-				-0.5
1,780,952	-				+0.0
1,780,952	-				-1.2
1,780,952	-				+0.4
1,780,952	-				-0.7
1,780,952	-				-2.2
1,780,952	-				-0.7
1,780,952	-				-0.3
1,780,952	-				-0.3
1,780,952	-				-0.8
1,780,952	-				-0.1
1,780,952	-				-0.4
1,780,952	-				+0.2
1,780,952	-				-2.8
1,780,952	-				-0.9
1,780,952	-				-1.4
1,780,952	-				-0.5
1,780,952	-				+0.3
1,780,952	-				-0.6
1,780,952	-				+0.6
1,780,952	-				-1.1
1,780,952	-				+0.6
1,780,952	-				-1.2
1,780,952	-				-0.6
1,780,952	-				-0.7
1,780,952	-				-1.2
1,780,952	-				-0.6
1,780,952	-				-1.2
1,780,952	-				-0.4
1,780,952	-				-0.1
1,780,952	-				-1.0
1,780,952	-				+1.6
1,780,954	+				-0.8
1,780,954	+				+0.0
1,780,954	+				+0.8
1,780,954	+				-1.0
1,780,954	+				-0.4
1,780,954	+				-0.5
1,780,954	+				+0.4
1,780,955	-				-0.6
1,780,955	-				-1.2
1,780,955	-				+1.0
1,780,955	-				+1.4
1,780,955	-				+0.6
1,780,955	-				-0.6
1,781,062	-		MPMX19_01689	0.14	+0.1
1,781,062	-		MPMX19_01689	0.14	-0.3
1,781,280	+		MPMX19_01689	0.55	-1.4
1,781,280	+		MPMX19_01689	0.55	-1.8
1,781,280	+		MPMX19_01689	0.55	-0.4
1,781,280	+		MPMX19_01689	0.55	-0.2
1,781,280	+		MPMX19_01689	0.55	+0.8
1,781,281	-		MPMX19_01689	0.55	-1.6
1,781,281	-		MPMX19_01689	0.55	+0.7
1,781,281	-		MPMX19_01689	0.55	-0.4
1,781,281	-		MPMX19_01689	0.55	-0.5
1,781,281	-		MPMX19_01689	0.55	-0.7
1,781,281	-		MPMX19_01689	0.55	-1.2
1,781,281	-		MPMX19_01689	0.55	-1.3
1,781,281	-		MPMX19_01689	0.55	-0.2
1,781,337	+		MPMX19_01689	0.65	-0.2
1,781,337	+		MPMX19_01689	0.65	-0.4
1,781,337	+		MPMX19_01689	0.65	+0.0
1,781,337	+		MPMX19_01689	0.65	-0.5
1,781,337	+		MPMX19_01689	0.65	-1.6
1,781,338	-		MPMX19_01689	0.66	-0.8
1,781,338	-		MPMX19_01689	0.66	-0.3
1,781,338	-		MPMX19_01689	0.66	-1.5
1,781,338	-		MPMX19_01689	0.66	-2.0
1,781,338	-		MPMX19_01689	0.66	-0.4
1,781,338	-		MPMX19_01689	0.66	-0.7