Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01614

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,692,733	+				-1.2
1,692,751	-				-0.4
1,692,751	-				-0.8
1,692,881	+		MPMX19_01613	0.21	+0.6
1,692,881	+		MPMX19_01613	0.21	-0.1
1,692,881	+		MPMX19_01613	0.21	+0.6
1,692,881	+		MPMX19_01613	0.21	+0.3
1,692,881	+		MPMX19_01613	0.21	+0.6
1,692,881	+		MPMX19_01613	0.21	-0.4
1,692,881	+		MPMX19_01613	0.21	-1.4
1,692,881	+		MPMX19_01613	0.21	+1.1
1,692,881	+		MPMX19_01613	0.21	-2.6
1,692,882	-		MPMX19_01613	0.21	-0.8
1,692,882	-		MPMX19_01613	0.21	-0.5
1,692,882	-		MPMX19_01613	0.21	-1.6
1,692,882	-		MPMX19_01613	0.21	-1.4
1,692,882	-		MPMX19_01613	0.21	+1.4
1,693,497	-				-2.0
1,693,497	-				+0.8
1,693,528	+				-1.6
1,693,528	+				-1.2
1,693,529	-				-0.4
1,693,529	-				-0.3
1,693,529	-				-1.5
1,693,529	-				-0.5
1,693,529	-				-1.2
1,694,070	+		MPMX19_01614	0.63	-0.6
1,694,070	+		MPMX19_01614	0.63	+0.9
1,694,070	+		MPMX19_01614	0.63	+0.6
1,694,070	+		MPMX19_01614	0.63	+1.8
1,694,071	-		MPMX19_01614	0.63	-1.2
1,694,071	-		MPMX19_01614	0.63	-0.1
1,694,071	-		MPMX19_01614	0.63	-1.2
1,694,071	-		MPMX19_01614	0.63	-0.9
1,694,071	-		MPMX19_01614	0.63	-0.4
1,694,379	+				+0.2
1,694,379	+				-2.3
1,694,465	+				-0.8
1,694,466	-				-1.9
1,694,466	-				-1.2
1,694,467	+				+1.1
1,694,484	+				-0.4
1,694,484	+				-0.6
1,694,484	+				-2.1
1,694,485	-				-1.6
1,694,485	-				-1.6
1,694,485	-				+0.0
1,694,485	-				-1.8
1,694,485	-				+0.2
1,694,495	+				-1.0
1,694,495	+				-0.0
1,694,495	+				-0.1
1,694,495	+				-1.8
1,694,495	+				-0.6
1,694,495	+				-2.0
1,694,496	-				-1.0
1,694,530	+				-0.1
1,694,530	+				-1.0
1,694,530	+				+0.2
1,694,530	+				-0.5
1,694,530	+				-1.2
1,694,530	+				-0.5
1,694,530	+				-0.3
1,694,530	+				-0.4
1,694,530	+				-1.0
1,694,530	+				+0.5
1,694,530	+				-0.2
1,694,530	+				-1.0
1,694,531	-				-2.5
1,694,531	-				-0.6
1,694,531	-				+0.1
1,694,531	-				-1.3
1,694,531	-				+0.6
1,694,531	-				-0.7
1,694,531	-				-2.1
1,694,531	-				-0.4
1,694,531	-				-0.8
1,694,531	-				+0.6
1,694,531	-				+1.0
1,694,531	-				+0.2
1,694,531	-				-0.4
1,694,531	-				-0.2
1,694,531	-				+0.4
1,694,685	+		MPMX19_01615	0.34	-0.6
1,694,685	+		MPMX19_01615	0.34	-0.4
1,694,685	+		MPMX19_01615	0.34	-0.6
1,694,685	+		MPMX19_01615	0.34	+0.7
1,694,685	+		MPMX19_01615	0.34	-0.2
1,694,685	+		MPMX19_01615	0.34	+0.8
1,694,685	+		MPMX19_01615	0.34	-0.8
1,694,685	+		MPMX19_01615	0.34	-2.5
1,694,685	+		MPMX19_01615	0.34	+0.6
1,694,685	+		MPMX19_01615	0.34	-0.1
1,694,685	+		MPMX19_01615	0.34	-1.2
1,694,685	+		MPMX19_01615	0.34	+0.2
1,694,685	+		MPMX19_01615	0.34	-0.4
1,694,686	-		MPMX19_01615	0.34	-0.6
1,694,686	-		MPMX19_01615	0.34	-1.6
1,694,686	-		MPMX19_01615	0.34	+0.6
1,694,686	-		MPMX19_01615	0.34	+0.2
1,694,686	-		MPMX19_01615	0.34	+0.8
1,694,686	-		MPMX19_01615	0.34	-0.1
1,694,686	-		MPMX19_01615	0.34	-1.1
1,694,686	-		MPMX19_01615	0.34	-0.8
1,694,686	-		MPMX19_01615	0.34	+2.0
1,694,686	-		MPMX19_01615	0.34	+0.0
1,694,686	-		MPMX19_01615	0.34	-0.9
1,694,686	-		MPMX19_01615	0.34	-0.6
1,694,686	-		MPMX19_01615	0.34	-0.7
1,694,686	-		MPMX19_01615	0.34	-0.2
1,695,061	+				-1.5
1,695,061	+				+0.0
1,695,062	-				-0.9
1,695,079	+				-1.2
1,695,080	-				-1.5
1,695,105	-				-0.7
1,695,139	+				-0.7
1,695,139	+				-0.2
1,695,139	+				+1.0
1,695,139	+				-0.8
1,695,139	+				+0.2
1,695,139	+				+0.4
1,695,139	+				+0.3
1,695,139	+				-0.4
1,695,139	+				+0.3
1,695,139	+				-0.7
1,695,139	+				-0.6
1,695,139	+				-0.6
1,695,140	-				+0.3
1,695,140	-				+0.2
1,695,140	-				+0.4
1,695,140	-				+0.4
1,695,140	-				+0.3
1,695,140	-				+0.6
1,695,140	-				+0.9
1,695,140	-				-0.4
1,695,140	-				-0.1
1,695,140	-				+1.0
1,695,140	-				-0.1
1,695,140	-				-1.6
1,695,238	+		MPMX19_01616	0.20	-0.6
1,695,238	+		MPMX19_01616	0.20	-0.4
1,695,239	-		MPMX19_01616	0.20	-0.6
1,695,239	-		MPMX19_01616	0.20	+0.1