Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01596

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,670,859	+		MPMX19_01595	0.38	-0.3
1,670,859	+		MPMX19_01595	0.38	-1.8
1,670,859	+		MPMX19_01595	0.38	-0.3
1,670,859	+		MPMX19_01595	0.38	-2.0
1,670,860	-		MPMX19_01595	0.38	-1.0
1,670,860	-		MPMX19_01595	0.38	-1.2
1,670,862	+		MPMX19_01595	0.38	-0.8
1,670,862	+		MPMX19_01595	0.38	-0.5
1,670,862	+		MPMX19_01595	0.38	+0.5
1,670,862	+		MPMX19_01595	0.38	+1.9
1,670,862	+		MPMX19_01595	0.38	+0.7
1,670,862	+		MPMX19_01595	0.38	-0.7
1,670,863	-		MPMX19_01595	0.38	-1.3
1,670,863	-		MPMX19_01595	0.38	+0.5
1,670,863	-		MPMX19_01595	0.38	-2.0
1,670,863	-		MPMX19_01595	0.38	+0.0
1,670,863	-		MPMX19_01595	0.38	-0.2
1,670,863	-		MPMX19_01595	0.38	-0.4
1,670,863	-		MPMX19_01595	0.38	-0.7
1,670,863	-		MPMX19_01595	0.38	+0.2
1,670,904	+		MPMX19_01595	0.42	+2.0
1,670,904	+		MPMX19_01595	0.42	-1.6
1,670,904	+		MPMX19_01595	0.42	-1.1
1,670,904	+		MPMX19_01595	0.42	-1.2
1,670,904	+		MPMX19_01595	0.42	-0.3
1,670,904	+		MPMX19_01595	0.42	-1.2
1,670,904	+		MPMX19_01595	0.42	+0.2
1,670,904	+		MPMX19_01595	0.42	+0.8
1,670,904	+		MPMX19_01595	0.42	-1.0
1,670,904	+		MPMX19_01595	0.42	-2.2
1,670,904	+		MPMX19_01595	0.42	-0.8
1,670,904	+		MPMX19_01595	0.42	+0.6
1,670,904	+		MPMX19_01595	0.42	-2.1
1,670,904	+		MPMX19_01595	0.42	-0.1
1,670,904	+		MPMX19_01595	0.42	+0.3
1,670,904	+		MPMX19_01595	0.42	-1.6
1,670,904	+		MPMX19_01595	0.42	+0.0
1,670,905	-		MPMX19_01595	0.42	-1.4
1,670,905	-		MPMX19_01595	0.42	-1.6
1,670,905	-		MPMX19_01595	0.42	-2.4
1,670,905	-		MPMX19_01595	0.42	-0.4
1,670,905	-		MPMX19_01595	0.42	-0.7
1,670,905	-		MPMX19_01595	0.42	-0.4
1,670,905	-		MPMX19_01595	0.42	-0.2
1,670,905	-		MPMX19_01595	0.42	+0.4
1,670,905	-		MPMX19_01595	0.42	+0.8
1,670,905	-		MPMX19_01595	0.42	+0.9
1,670,905	-		MPMX19_01595	0.42	-0.6
1,670,919	+		MPMX19_01595	0.43	-0.6
1,670,919	+		MPMX19_01595	0.43	+0.5
1,670,919	+		MPMX19_01595	0.43	+0.0
1,670,919	+		MPMX19_01595	0.43	-0.2
1,670,919	+		MPMX19_01595	0.43	-1.8
1,670,920	-		MPMX19_01595	0.43	+0.5
1,670,920	-		MPMX19_01595	0.43	-0.5
1,670,990	+		MPMX19_01595	0.49	+0.6
1,671,099	+		MPMX19_01595	0.58	+2.6
1,671,099	+		MPMX19_01595	0.58	+0.0
1,671,099	+		MPMX19_01595	0.58	-0.2
1,671,099	+		MPMX19_01595	0.58	-0.5
1,671,099	+		MPMX19_01595	0.58	-1.4
1,671,099	+		MPMX19_01595	0.58	-0.8
1,671,099	+		MPMX19_01595	0.58	+0.2
1,671,100	-		MPMX19_01595	0.58	-1.6
1,671,100	-		MPMX19_01595	0.58	+0.4
1,671,100	-		MPMX19_01595	0.58	-0.8
1,671,100	-		MPMX19_01595	0.58	-1.1
1,671,100	-		MPMX19_01595	0.58	-0.8
1,671,100	-		MPMX19_01595	0.58	-0.4
1,671,123	+		MPMX19_01595	0.60	-0.2
1,671,123	+		MPMX19_01595	0.60	-0.2
1,671,123	+		MPMX19_01595	0.60	+0.9
1,671,123	+		MPMX19_01595	0.60	+0.9
1,671,123	+		MPMX19_01595	0.60	+0.5
1,671,123	+		MPMX19_01595	0.60	+0.4
1,671,123	+		MPMX19_01595	0.60	-0.8
1,671,123	+		MPMX19_01595	0.60	-0.6
1,671,123	+		MPMX19_01595	0.60	+0.6
1,671,123	+		MPMX19_01595	0.60	+0.6
1,671,123	+		MPMX19_01595	0.60	-0.7
1,671,123	+		MPMX19_01595	0.60	-0.5
1,671,123	+		MPMX19_01595	0.60	-0.8
1,671,123	+		MPMX19_01595	0.60	-0.7
1,671,123	+		MPMX19_01595	0.60	+0.8
1,671,123	+		MPMX19_01595	0.60	+0.2
1,671,123	+		MPMX19_01595	0.60	-0.8
1,671,123	+		MPMX19_01595	0.60	-1.4
1,671,123	+		MPMX19_01595	0.60	+0.4
1,671,123	+		MPMX19_01595	0.60	-1.1
1,671,123	+		MPMX19_01595	0.60	-0.2
1,671,123	+		MPMX19_01595	0.60	-1.7
1,671,123	+		MPMX19_01595	0.60	-1.6
1,671,123	+		MPMX19_01595	0.60	-0.3
1,671,123	+		MPMX19_01595	0.60	+1.0
1,671,123	+		MPMX19_01595	0.60	-0.7
1,671,123	+		MPMX19_01595	0.60	+0.9
1,671,123	+		MPMX19_01595	0.60	-3.0
1,671,123	+		MPMX19_01595	0.60	+0.0
1,671,123	+		MPMX19_01595	0.60	-1.2
1,671,123	+		MPMX19_01595	0.60	-1.8
1,671,123	+		MPMX19_01595	0.60	-0.3
1,671,123	+		MPMX19_01595	0.60	-0.2
1,671,123	+		MPMX19_01595	0.60	-1.7
1,671,123	+		MPMX19_01595	0.60	-0.3
1,671,123	+		MPMX19_01595	0.60	-0.7
1,671,123	+		MPMX19_01595	0.60	-2.1
1,671,123	+		MPMX19_01595	0.60	-0.9
1,671,123	+		MPMX19_01595	0.60	-0.2
1,671,123	+		MPMX19_01595	0.60	-1.6
1,671,124	-		MPMX19_01595	0.60	+0.5
1,671,124	-		MPMX19_01595	0.60	+0.0
1,671,124	-		MPMX19_01595	0.60	-2.1
1,671,124	-		MPMX19_01595	0.60	+0.9
1,671,124	-		MPMX19_01595	0.60	+0.6
1,671,124	-		MPMX19_01595	0.60	+0.0
1,671,124	-		MPMX19_01595	0.60	-3.0
1,671,124	-		MPMX19_01595	0.60	+0.3
1,671,124	-		MPMX19_01595	0.60	+0.3
1,671,124	-		MPMX19_01595	0.60	-1.3
1,671,124	-		MPMX19_01595	0.60	-1.3
1,671,124	-		MPMX19_01595	0.60	-1.0
1,671,124	-		MPMX19_01595	0.60	-0.6
1,671,124	-		MPMX19_01595	0.60	-0.3
1,671,124	-		MPMX19_01595	0.60	-1.1
1,671,124	-		MPMX19_01595	0.60	-2.7
1,671,124	-		MPMX19_01595	0.60	+1.0
1,671,124	-		MPMX19_01595	0.60	-1.6
1,671,124	-		MPMX19_01595	0.60	+0.8
1,671,124	-		MPMX19_01595	0.60	+0.6
1,671,124	-		MPMX19_01595	0.60	+0.3
1,671,124	-		MPMX19_01595	0.60	-2.1
1,671,124	-		MPMX19_01595	0.60	+0.6
1,671,124	-		MPMX19_01595	0.60	+0.9
1,671,124	-		MPMX19_01595	0.60	-0.4
1,671,124	-		MPMX19_01595	0.60	-0.2
1,671,124	-		MPMX19_01595	0.60	+0.1
1,671,124	-		MPMX19_01595	0.60	-0.1
1,671,124	-		MPMX19_01595	0.60	-0.6
1,671,124	-		MPMX19_01595	0.60	-1.4
1,671,124	-		MPMX19_01595	0.60	-0.9
1,671,124	-		MPMX19_01595	0.60	+0.0
1,671,124	-		MPMX19_01595	0.60	-1.6
1,671,124	-		MPMX19_01595	0.60	+0.6
1,671,124	-		MPMX19_01595	0.60	+0.0
1,671,124	-		MPMX19_01595	0.60	+0.3
1,671,124	-		MPMX19_01595	0.60	+0.2
1,671,124	-		MPMX19_01595	0.60	-1.6
1,671,124	-		MPMX19_01595	0.60	-1.3
1,671,124	-		MPMX19_01595	0.60	-0.9
1,671,143	+		MPMX19_01595	0.62	-0.5
1,671,143	+		MPMX19_01595	0.62	+0.2
1,671,143	+		MPMX19_01595	0.62	-0.5
1,671,143	+		MPMX19_01595	0.62	-0.5
1,671,143	+		MPMX19_01595	0.62	-1.7
1,671,143	+		MPMX19_01595	0.62	-0.6
1,671,143	+		MPMX19_01595	0.62	-1.4
1,671,143	+		MPMX19_01595	0.62	-0.6
1,671,143	+		MPMX19_01595	0.62	-1.4
1,671,143	+		MPMX19_01595	0.62	+0.6
1,671,143	+		MPMX19_01595	0.62	-0.7
1,671,143	+		MPMX19_01595	0.62	+0.0
1,671,144	-		MPMX19_01595	0.62	+1.9
1,671,144	-		MPMX19_01595	0.62	+0.3
1,671,144	-		MPMX19_01595	0.62	-1.3
1,671,144	-		MPMX19_01595	0.62	-0.3
1,671,144	-		MPMX19_01595	0.62	-1.1
1,671,144	-		MPMX19_01595	0.62	-1.1
1,671,144	-		MPMX19_01595	0.62	-0.9
1,671,255	+		MPMX19_01595	0.72	+1.1
1,671,255	+		MPMX19_01595	0.72	+0.1
1,671,255	+		MPMX19_01595	0.72	+0.2
1,671,255	+		MPMX19_01595	0.72	+0.5
1,671,255	+		MPMX19_01595	0.72	-1.6
1,671,255	+		MPMX19_01595	0.72	+0.7
1,671,255	+		MPMX19_01595	0.72	-0.2
1,671,255	+		MPMX19_01595	0.72	-0.2
1,671,255	+		MPMX19_01595	0.72	-0.2
1,671,255	+		MPMX19_01595	0.72	-0.6
1,671,255	+		MPMX19_01595	0.72	+2.1
1,671,255	+		MPMX19_01595	0.72	-0.1
1,671,255	+		MPMX19_01595	0.72	-1.1
1,671,255	+		MPMX19_01595	0.72	-1.2
1,671,255	+		MPMX19_01595	0.72	-0.9
1,671,255	+		MPMX19_01595	0.72	+0.6
1,671,255	+		MPMX19_01595	0.72	-1.5
1,671,255	+		MPMX19_01595	0.72	-0.1
1,671,255	+		MPMX19_01595	0.72	-0.3
1,671,255	+		MPMX19_01595	0.72	-0.8
1,671,255	+		MPMX19_01595	0.72	-0.7
1,671,255	+		MPMX19_01595	0.72	+0.8
1,671,255	+		MPMX19_01595	0.72	+0.2
1,671,255	+		MPMX19_01595	0.72	-0.1
1,671,255	+		MPMX19_01595	0.72	-1.8
1,671,255	+		MPMX19_01595	0.72	+0.2
1,671,255	+		MPMX19_01595	0.72	-0.7
1,671,255	+		MPMX19_01595	0.72	-1.5
1,671,255	+		MPMX19_01595	0.72	-1.0
1,671,255	+		MPMX19_01595	0.72	+0.3
1,671,255	+		MPMX19_01595	0.72	+0.1
1,671,255	+		MPMX19_01595	0.72	-1.0
1,671,255	+		MPMX19_01595	0.72	-0.9
1,671,255	+		MPMX19_01595	0.72	+0.2
1,671,255	+		MPMX19_01595	0.72	-0.1
1,671,255	+		MPMX19_01595	0.72	+0.2
1,671,255	+		MPMX19_01595	0.72	-0.6
1,671,255	+		MPMX19_01595	0.72	+0.4
1,671,255	+		MPMX19_01595	0.72	+1.2
1,671,255	+		MPMX19_01595	0.72	-1.6
1,671,256	-		MPMX19_01595	0.72	-0.7
1,671,256	-		MPMX19_01595	0.72	+0.3
1,671,256	-		MPMX19_01595	0.72	-1.4
1,671,256	-		MPMX19_01595	0.72	-0.2
1,671,256	-		MPMX19_01595	0.72	+0.5
1,671,256	-		MPMX19_01595	0.72	+1.3
1,671,256	-		MPMX19_01595	0.72	-3.0
1,671,256	-		MPMX19_01595	0.72	+0.7
1,671,256	-		MPMX19_01595	0.72	+1.3
1,671,256	-		MPMX19_01595	0.72	+0.0
1,671,256	-		MPMX19_01595	0.72	-1.1
1,671,256	-		MPMX19_01595	0.72	-0.8
1,671,256	-		MPMX19_01595	0.72	-0.4
1,671,256	-		MPMX19_01595	0.72	-0.9
1,671,256	-		MPMX19_01595	0.72	-0.7
1,671,256	-		MPMX19_01595	0.72	+0.4
1,671,256	-		MPMX19_01595	0.72	-2.3
1,671,256	-		MPMX19_01595	0.72	-0.2
1,671,256	-		MPMX19_01595	0.72	-0.0
1,671,256	-		MPMX19_01595	0.72	+0.5
1,671,256	-		MPMX19_01595	0.72	-0.1
1,671,256	-		MPMX19_01595	0.72	-0.3
1,671,256	-		MPMX19_01595	0.72	-0.3
1,671,256	-		MPMX19_01595	0.72	-0.4
1,671,256	-		MPMX19_01595	0.72	-1.0
1,671,256	-		MPMX19_01595	0.72	+1.0
1,671,256	-		MPMX19_01595	0.72	-1.1
1,671,256	-		MPMX19_01595	0.72	-0.7
1,671,350	+		MPMX19_01595	0.80	+0.6
1,671,350	+		MPMX19_01595	0.80	-0.1
1,671,350	+		MPMX19_01595	0.80	-1.2
1,671,350	+		MPMX19_01595	0.80	-2.2
1,671,351	-		MPMX19_01595	0.80	-0.8
1,671,351	-		MPMX19_01595	0.80	-0.1
1,671,351	-		MPMX19_01595	0.80	+0.9
1,671,537	+				-0.3
1,671,537	+				-0.7
1,671,537	+				+0.0
1,671,537	+				-0.8
1,671,537	+				+1.1
1,671,537	+				-0.6
1,671,537	+				-1.4
1,671,537	+				+0.7
1,671,537	+				+0.2
1,671,537	+				-1.3
1,671,537	+				-0.4
1,671,537	+				+1.9
1,671,537	+				+0.4
1,671,537	+				-0.1
1,671,537	+				+0.6
1,671,537	+				-0.7
1,671,537	+				-0.3
1,671,537	+				-1.1
1,671,538	-				+1.1
1,671,538	-				-1.2
1,671,538	-				-0.4
1,671,538	-				-0.3
1,671,538	-				-1.3
1,671,538	-				+0.4
1,671,538	-				-0.6
1,671,538	-				-1.1
1,671,538	-				-0.1
1,671,538	-				-1.1
1,671,538	-				+0.6
1,671,538	-				+0.2
1,671,538	-				-0.4
1,671,538	-				-0.4
1,671,538	-				+0.4
1,671,813	-		MPMX19_01596	0.42	-0.7
1,671,872	+		MPMX19_01596	0.52	-1.0
1,671,873	-		MPMX19_01596	0.53	-0.8
1,671,873	-		MPMX19_01596	0.53	-2.3
1,671,902	+		MPMX19_01596	0.58	+0.0
1,671,903	-		MPMX19_01596	0.58	+0.6
1,672,055	+		MPMX19_01596	0.86	-0.1
1,672,055	+		MPMX19_01596	0.86	-0.2
1,672,055	+		MPMX19_01596	0.86	-0.6
1,672,055	+		MPMX19_01596	0.86	-2.0
1,672,055	+		MPMX19_01596	0.86	-2.5
1,672,055	+		MPMX19_01596	0.86	-0.7
1,672,056	-		MPMX19_01596	0.86	-1.4
1,672,056	-		MPMX19_01596	0.86	-0.4
1,672,056	-		MPMX19_01596	0.86	-0.3
1,672,056	-		MPMX19_01596	0.86	-0.6
1,672,150	+				+0.0
1,672,150	+				-1.0
1,672,150	+				+0.2
1,672,150	+				-1.0
1,672,150	+				+0.3
1,672,150	+				+0.3
1,672,151	-				-1.1
1,672,151	-				-1.2
1,672,151	-				-0.6
1,672,151	-				+0.0
1,672,377	+		MPMX19_01597	0.25	-0.4
1,672,377	+		MPMX19_01597	0.25	+0.6
1,672,377	+		MPMX19_01597	0.25	+0.2
1,672,377	+		MPMX19_01597	0.25	-1.0
1,672,378	-		MPMX19_01597	0.25	+1.6
1,672,742	+		MPMX19_01597	0.73	-0.7
1,672,743	-		MPMX19_01597	0.73	-1.3
1,672,743	-		MPMX19_01597	0.73	-0.9
1,672,931	+				-0.2
1,672,932	-				-0.6
1,672,932	-				-0.4
1,672,932	-				-0.4
1,672,932	-				-0.2
1,672,950	-				+0.3
1,672,994	+				-0.5
1,673,099	+				-0.1
1,673,099	+				+1.2