Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01505

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,574,263	-				-1.3
1,574,263	-				-0.2
1,574,405	+		MPMX19_01504	0.13	+1.3
1,574,405	+		MPMX19_01504	0.13	+0.2
1,574,405	+		MPMX19_01504	0.13	+1.9
1,574,405	+		MPMX19_01504	0.13	+0.6
1,574,405	+		MPMX19_01504	0.13	-0.1
1,574,405	+		MPMX19_01504	0.13	-1.0
1,574,405	+		MPMX19_01504	0.13	+0.0
1,574,405	+		MPMX19_01504	0.13	-0.7
1,574,405	+		MPMX19_01504	0.13	-0.3
1,574,405	+		MPMX19_01504	0.13	-0.7
1,574,405	+		MPMX19_01504	0.13	-0.3
1,574,405	+		MPMX19_01504	0.13	-0.8
1,574,406	-		MPMX19_01504	0.13	-0.5
1,574,406	-		MPMX19_01504	0.13	-1.4
1,574,406	-		MPMX19_01504	0.13	+0.8
1,574,406	-		MPMX19_01504	0.13	+0.2
1,574,406	-		MPMX19_01504	0.13	+1.4
1,574,406	-		MPMX19_01504	0.13	-1.0
1,574,406	-		MPMX19_01504	0.13	+0.0
1,574,406	-		MPMX19_01504	0.13	-0.1
1,574,406	-		MPMX19_01504	0.13	-0.2
1,574,535	+		MPMX19_01504	0.27	-1.0
1,574,536	-		MPMX19_01504	0.28	-0.5
1,574,536	-		MPMX19_01504	0.28	-0.6
1,574,536	-		MPMX19_01504	0.28	+1.6
1,574,536	-		MPMX19_01504	0.28	+1.0
1,574,562	+		MPMX19_01504	0.31	+0.1
1,574,563	-		MPMX19_01504	0.31	+0.3
1,574,563	-		MPMX19_01504	0.31	-2.8
1,574,563	-		MPMX19_01504	0.31	+0.0
1,574,691	+		MPMX19_01504	0.45	-1.3
1,574,691	+		MPMX19_01504	0.45	+0.6
1,574,691	+		MPMX19_01504	0.45	-1.2
1,574,691	+		MPMX19_01504	0.45	+0.9
1,574,691	+		MPMX19_01504	0.45	-0.5
1,574,691	+		MPMX19_01504	0.45	-0.3
1,574,691	+		MPMX19_01504	0.45	-1.9
1,574,691	+		MPMX19_01504	0.45	+0.0
1,574,691	+		MPMX19_01504	0.45	+0.0
1,574,691	+		MPMX19_01504	0.45	+2.6
1,574,691	+		MPMX19_01504	0.45	+0.3
1,574,691	+		MPMX19_01504	0.45	-0.9
1,574,691	+		MPMX19_01504	0.45	+0.5
1,574,691	+		MPMX19_01504	0.45	+0.3
1,574,691	+		MPMX19_01504	0.45	+1.8
1,574,691	+		MPMX19_01504	0.45	-1.1
1,574,691	+		MPMX19_01504	0.45	-1.1
1,574,691	+		MPMX19_01504	0.45	+0.4
1,574,691	+		MPMX19_01504	0.45	+0.1
1,574,691	+		MPMX19_01504	0.45	+1.2
1,574,691	+		MPMX19_01504	0.45	-0.7
1,574,691	+		MPMX19_01504	0.45	-1.0
1,574,691	+		MPMX19_01504	0.45	+0.1
1,574,691	+		MPMX19_01504	0.45	-0.2
1,574,691	+		MPMX19_01504	0.45	+0.0
1,574,691	+		MPMX19_01504	0.45	-1.0
1,574,691	+		MPMX19_01504	0.45	+0.4
1,574,691	+		MPMX19_01504	0.45	+0.9
1,574,691	+		MPMX19_01504	0.45	-0.7
1,574,691	+		MPMX19_01504	0.45	-0.4
1,574,691	+		MPMX19_01504	0.45	-1.1
1,574,691	+		MPMX19_01504	0.45	-0.7
1,574,691	+		MPMX19_01504	0.45	-0.1
1,574,691	+		MPMX19_01504	0.45	-1.0
1,574,691	+		MPMX19_01504	0.45	+1.2
1,574,691	+		MPMX19_01504	0.45	+0.0
1,574,691	+		MPMX19_01504	0.45	-1.9
1,574,691	+		MPMX19_01504	0.45	-1.0
1,574,691	+		MPMX19_01504	0.45	-1.0
1,574,691	+		MPMX19_01504	0.45	-0.3
1,574,691	+		MPMX19_01504	0.45	+0.0
1,574,692	-		MPMX19_01504	0.45	-0.9
1,574,692	-		MPMX19_01504	0.45	-0.1
1,574,692	-		MPMX19_01504	0.45	-0.4
1,574,692	-		MPMX19_01504	0.45	+0.3
1,574,692	-		MPMX19_01504	0.45	+1.1
1,574,692	-		MPMX19_01504	0.45	-0.4
1,574,692	-		MPMX19_01504	0.45	+0.9
1,574,692	-		MPMX19_01504	0.45	-0.2
1,574,692	-		MPMX19_01504	0.45	+1.3
1,574,692	-		MPMX19_01504	0.45	-0.9
1,574,692	-		MPMX19_01504	0.45	-0.4
1,574,692	-		MPMX19_01504	0.45	+0.0
1,574,692	-		MPMX19_01504	0.45	-1.4
1,574,692	-		MPMX19_01504	0.45	-1.4
1,574,692	-		MPMX19_01504	0.45	+0.9
1,574,692	-		MPMX19_01504	0.45	+0.4
1,574,692	-		MPMX19_01504	0.45	+0.4
1,574,692	-		MPMX19_01504	0.45	+0.0
1,574,692	-		MPMX19_01504	0.45	-0.1
1,574,692	-		MPMX19_01504	0.45	-0.2
1,574,692	-		MPMX19_01504	0.45	+0.2
1,574,692	-		MPMX19_01504	0.45	+0.3
1,574,692	-		MPMX19_01504	0.45	+0.5
1,574,692	-		MPMX19_01504	0.45	-2.5
1,574,692	-		MPMX19_01504	0.45	-1.2
1,574,692	-		MPMX19_01504	0.45	-1.9
1,574,692	-		MPMX19_01504	0.45	+0.3
1,574,692	-		MPMX19_01504	0.45	-0.7
1,574,692	-		MPMX19_01504	0.45	-1.1
1,574,692	-		MPMX19_01504	0.45	+1.0
1,574,692	-		MPMX19_01504	0.45	-1.8
1,574,692	-		MPMX19_01504	0.45	-0.3
1,574,692	-		MPMX19_01504	0.45	-2.0
1,574,692	-		MPMX19_01504	0.45	-1.3
1,574,692	-		MPMX19_01504	0.45	-0.4
1,574,692	-		MPMX19_01504	0.45	-0.3
1,574,692	-		MPMX19_01504	0.45	+1.1
1,574,692	-		MPMX19_01504	0.45	-0.1
1,574,692	-		MPMX19_01504	0.45	-0.7
1,574,692	-		MPMX19_01504	0.45	-1.3
1,574,692	-		MPMX19_01504	0.45	-0.5
1,574,692	-		MPMX19_01504	0.45	-1.7
1,574,692	-		MPMX19_01504	0.45	+1.4
1,574,692	-		MPMX19_01504	0.45	-0.4
1,575,120	+				-0.3
1,575,120	+				+0.0
1,575,120	+				+0.5
1,575,120	+				-0.2
1,575,120	+				-1.7
1,575,120	+				+1.0
1,575,120	+				-2.4
1,575,120	+				+0.9
1,575,120	+				-0.6
1,575,120	+				-1.5
1,575,120	+				+0.5
1,575,120	+				-0.9
1,575,120	+				-0.6
1,575,120	+				-0.3
1,575,120	+				+0.2
1,575,120	+				-0.8
1,575,120	+				+0.9
1,575,121	-				+0.3
1,575,121	-				+0.7
1,575,121	-				-1.2
1,575,121	-				+0.1
1,575,121	-				+0.0
1,575,121	-				-0.7
1,575,121	-				+0.7
1,575,121	-				-1.3
1,575,121	-				+0.0
1,575,121	-				-0.9
1,575,121	-				-3.1
1,575,140	+				-1.7
1,575,141	-				+0.2
1,575,141	-				+0.0
1,575,211	+				-1.1
1,575,211	+				-0.2
1,575,211	+				+0.9
1,575,212	-				+0.3
1,575,212	-				-2.3
1,575,212	-				-1.2
1,575,255	+				-0.9
1,575,255	+				-2.0
1,575,255	+				-0.2
1,575,255	+				-1.9
1,575,255	+				-0.3
1,575,255	+				-1.2
1,575,255	+				+0.6
1,575,255	+				-0.5
1,575,255	+				+1.0
1,575,256	-				+0.9
1,575,256	-				+1.0
1,575,256	-				+0.7
1,575,256	-				+0.5
1,575,256	-				+1.4
1,575,612	+		MPMX19_01505	0.52	-1.3
1,575,612	+		MPMX19_01505	0.52	-0.9
1,575,612	+		MPMX19_01505	0.52	+0.6
1,575,613	-		MPMX19_01505	0.52	-1.9
1,575,613	-		MPMX19_01505	0.52	-0.3
1,575,613	-		MPMX19_01505	0.52	-0.8
1,575,613	-		MPMX19_01505	0.52	+0.3
1,575,613	-		MPMX19_01505	0.52	-0.9
1,575,613	-		MPMX19_01505	0.52	+0.7
1,575,613	-		MPMX19_01505	0.52	-0.5
1,575,780	+		MPMX19_01505	0.77	-0.6
1,575,780	+		MPMX19_01505	0.77	+0.6
1,575,780	+		MPMX19_01505	0.77	-1.1
1,575,780	+		MPMX19_01505	0.77	+0.1
1,575,780	+		MPMX19_01505	0.77	-0.1
1,575,780	+		MPMX19_01505	0.77	-1.7
1,575,781	-		MPMX19_01505	0.77	+0.1
1,575,781	-		MPMX19_01505	0.77	+0.1
1,575,781	-		MPMX19_01505	0.77	+0.6
1,575,853	+		MPMX19_01505	0.88	-1.4
1,575,853	+		MPMX19_01505	0.88	-0.1
1,575,853	+		MPMX19_01505	0.88	-1.1
1,575,853	+		MPMX19_01505	0.88	-1.2
1,575,854	-		MPMX19_01505	0.88	+0.0
1,575,854	-		MPMX19_01505	0.88	-1.1
1,575,854	-		MPMX19_01505	0.88	-0.3
1,575,854	-		MPMX19_01505	0.88	-0.3
1,575,864	+		MPMX19_01505	0.89	-0.8
1,575,864	+		MPMX19_01505	0.89	-0.5
1,575,864	+		MPMX19_01505	0.89	-2.9
1,575,864	+		MPMX19_01505	0.89	-1.9
1,575,864	+		MPMX19_01505	0.89	+0.2
1,575,865	-		MPMX19_01505	0.89	-0.9
1,575,865	-		MPMX19_01505	0.89	-0.3
1,575,865	-		MPMX19_01505	0.89	-0.8
1,575,865	-		MPMX19_01505	0.89	+0.4
1,575,865	-		MPMX19_01505	0.89	-2.2
1,575,865	-		MPMX19_01505	0.89	-1.6
1,575,865	-		MPMX19_01505	0.89	-1.6
1,575,865	-		MPMX19_01505	0.89	-0.5
1,575,865	-		MPMX19_01505	0.89	-1.2
1,575,865	-		MPMX19_01505	0.89	-0.7
1,575,998	+				-0.6
1,575,998	+				+0.3
1,575,998	+				+0.3
1,575,998	+				-1.2
1,575,999	-				-1.6
1,575,999	-				-1.4
1,575,999	-				+0.0
1,575,999	-				-0.9
1,576,015	+				-0.1
1,576,015	+				+0.4
1,576,015	+				-1.4
1,576,015	+				-1.1
1,576,015	+				+0.2
1,576,015	+				-2.3
1,576,015	+				-0.7
1,576,015	+				-0.8
1,576,015	+				+0.0
1,576,015	+				-0.2
1,576,015	+				-1.4
1,576,015	+				-0.6
1,576,015	+				-0.5
1,576,016	-				-0.1
1,576,016	-				+0.3
1,576,016	-				+0.4
1,576,016	-				-0.1
1,576,016	-				-2.0
1,576,016	-				-2.3
1,576,016	-				-0.4
1,576,016	-				+0.2
1,576,016	-				+0.2
1,576,016	-				-0.9
1,576,016	-				+0.2
1,576,016	-				+0.5
1,576,025	+				-0.6
1,576,025	+				+1.6
1,576,026	-				+0.6
1,576,026	-				-0.1
1,576,069	+				-1.3
1,576,069	+				+0.0
1,576,069	+				-1.3
1,576,069	+				-0.6
1,576,069	+				-2.0
1,576,069	+				+0.6
1,576,069	+				+0.6
1,576,069	+				-0.3
1,576,069	+				+1.1
1,576,069	+				-1.1
1,576,069	+				+0.0
1,576,069	+				+0.3
1,576,069	+				+0.3
1,576,069	+				-0.9
1,576,069	+				-0.2
1,576,069	+				-0.4
1,576,070	-				-1.4
1,576,070	-				-1.6
1,576,070	-				-1.0
1,576,070	-				-0.7
1,576,070	-				+0.5
1,576,070	-				+1.6
1,576,070	-				-1.0
1,576,070	-				-0.7
1,576,070	-				-0.3
1,576,070	-				-2.0
1,576,070	-				+0.4
1,576,070	-				-0.6
1,576,070	-				+0.3
1,576,070	-				-0.6
1,576,070	-				+0.3
1,576,070	-				+0.0
1,576,070	-				-1.6
1,576,072	-				+0.0
1,576,397	+		MPMX19_01506	0.28	+0.8
1,576,397	+		MPMX19_01506	0.28	-2.1
1,576,397	+		MPMX19_01506	0.28	-3.1
1,576,397	+		MPMX19_01506	0.28	+0.3
1,576,397	+		MPMX19_01506	0.28	+0.6
1,576,397	+		MPMX19_01506	0.28	+0.2
1,576,397	+		MPMX19_01506	0.28	+0.5
1,576,397	+		MPMX19_01506	0.28	-0.2
1,576,397	+		MPMX19_01506	0.28	-0.4
1,576,397	+		MPMX19_01506	0.28	-1.6
1,576,398	-		MPMX19_01506	0.28	+0.7
1,576,398	-		MPMX19_01506	0.28	-1.4
1,576,398	-		MPMX19_01506	0.28	+0.2
1,576,398	-		MPMX19_01506	0.28	-1.3
1,576,398	-		MPMX19_01506	0.28	-2.0
1,576,398	-		MPMX19_01506	0.28	-0.6
1,576,398	-		MPMX19_01506	0.28	-0.3
1,576,398	-		MPMX19_01506	0.28	+0.0
1,576,592	+		MPMX19_01506	0.52	-0.2
1,576,592	+		MPMX19_01506	0.52	-2.2
1,576,592	+		MPMX19_01506	0.52	+0.2
1,576,592	+		MPMX19_01506	0.52	-2.9
1,576,592	+		MPMX19_01506	0.52	+0.9
1,576,592	+		MPMX19_01506	0.52	-0.2
1,576,592	+		MPMX19_01506	0.52	-0.7
1,576,592	+		MPMX19_01506	0.52	-0.1
1,576,592	+		MPMX19_01506	0.52	+0.0
1,576,592	+		MPMX19_01506	0.52	+0.9
1,576,592	+		MPMX19_01506	0.52	-1.4
1,576,592	+		MPMX19_01506	0.52	-0.3
1,576,592	+		MPMX19_01506	0.52	-1.0
1,576,593	-		MPMX19_01506	0.52	-1.2
1,576,593	-		MPMX19_01506	0.52	-0.3
1,576,593	-		MPMX19_01506	0.52	+0.3
1,576,593	-		MPMX19_01506	0.52	-2.3
1,576,593	-		MPMX19_01506	0.52	+1.6
1,576,593	-		MPMX19_01506	0.52	-0.8
1,576,593	-		MPMX19_01506	0.52	-0.5
1,576,593	-		MPMX19_01506	0.52	+0.6
1,576,593	-		MPMX19_01506	0.52	-1.1
1,576,593	-		MPMX19_01506	0.52	+0.4
1,576,593	-		MPMX19_01506	0.52	-2.2
1,576,593	-		MPMX19_01506	0.52	+0.0
1,576,664	+		MPMX19_01506	0.61	-1.7
1,576,664	+		MPMX19_01506	0.61	+0.3
1,576,664	+		MPMX19_01506	0.61	-0.7
1,576,664	+		MPMX19_01506	0.61	-0.5
1,576,664	+		MPMX19_01506	0.61	-0.3
1,576,664	+		MPMX19_01506	0.61	-0.6
1,576,664	+		MPMX19_01506	0.61	-1.0
1,576,664	+		MPMX19_01506	0.61	-0.7
1,576,664	+		MPMX19_01506	0.61	+0.2
1,576,664	+		MPMX19_01506	0.61	+0.0
1,576,664	+		MPMX19_01506	0.61	+0.0
1,576,664	+		MPMX19_01506	0.61	-1.6
1,576,664	+		MPMX19_01506	0.61	-0.4
1,576,664	+		MPMX19_01506	0.61	-0.6
1,576,664	+		MPMX19_01506	0.61	+0.6
1,576,664	+		MPMX19_01506	0.61	-1.7
1,576,664	+		MPMX19_01506	0.61	-0.7
1,576,665	-		MPMX19_01506	0.61	-0.4
1,576,665	-		MPMX19_01506	0.61	+0.0
1,576,665	-		MPMX19_01506	0.61	-1.0
1,576,665	-		MPMX19_01506	0.61	-0.4
1,576,665	-		MPMX19_01506	0.61	+0.0
1,576,665	-		MPMX19_01506	0.61	-1.1
1,576,665	-		MPMX19_01506	0.61	-1.3
1,576,665	-		MPMX19_01506	0.61	-0.2
1,576,665	-		MPMX19_01506	0.61	-1.3
1,576,665	-		MPMX19_01506	0.61	+0.2
1,576,665	-		MPMX19_01506	0.61	-0.7
1,576,665	-		MPMX19_01506	0.61	+0.9
1,576,665	-		MPMX19_01506	0.61	-0.5
1,576,665	-		MPMX19_01506	0.61	-0.2
1,576,665	-		MPMX19_01506	0.61	-0.4
1,576,844	+		MPMX19_01506	0.84	-0.5
1,576,844	+		MPMX19_01506	0.84	-1.2
1,576,844	+		MPMX19_01506	0.84	-0.7
1,576,844	+		MPMX19_01506	0.84	+0.5
1,576,844	+		MPMX19_01506	0.84	-0.1
1,576,844	+		MPMX19_01506	0.84	-0.9
1,576,844	+		MPMX19_01506	0.84	+0.3
1,576,844	+		MPMX19_01506	0.84	-1.3
1,576,844	+		MPMX19_01506	0.84	-0.8
1,576,844	+		MPMX19_01506	0.84	-0.3
1,576,844	+		MPMX19_01506	0.84	-2.8
1,576,844	+		MPMX19_01506	0.84	-0.6
1,576,845	-		MPMX19_01506	0.84	-0.5
1,576,845	-		MPMX19_01506	0.84	+0.9
1,576,845	-		MPMX19_01506	0.84	-0.4
1,576,845	-		MPMX19_01506	0.84	+0.6
1,576,845	-		MPMX19_01506	0.84	-0.0
1,576,845	-		MPMX19_01506	0.84	-0.4
1,576,845	-		MPMX19_01506	0.84	+0.9
1,576,845	-		MPMX19_01506	0.84	-0.6
1,576,845	-		MPMX19_01506	0.84	-1.7
1,576,845	-		MPMX19_01506	0.84	+1.9