Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01402

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,465,245	+		MPMX19_01400	0.69	-0.7
1,465,245	+		MPMX19_01400	0.69	-0.4
1,465,245	+		MPMX19_01400	0.69	-1.0
1,465,246	-		MPMX19_01400	0.69	+1.6
1,465,246	-		MPMX19_01400	0.69	-1.2
1,465,425	-				+1.9
1,465,843	+		MPMX19_01401	0.59	-0.4
1,465,843	+		MPMX19_01401	0.59	+0.0
1,465,844	-		MPMX19_01401	0.59	+0.4
1,465,844	-		MPMX19_01401	0.59	+0.8
1,465,844	-		MPMX19_01401	0.59	+0.9
1,465,844	-		MPMX19_01401	0.59	+0.6
1,466,015	-				-2.4
1,466,028	+				+0.6
1,466,029	-				-0.1
1,466,029	-				-0.1
1,466,029	-				-0.3
1,466,029	-				+0.9
1,466,098	+				-1.9
1,466,098	+				+0.4
1,466,098	+				-1.0
1,466,098	+				-0.6
1,466,098	+				-0.3
1,466,098	+				-0.4
1,466,098	+				-1.2
1,466,099	-				-2.1
1,466,099	-				-0.6
1,466,099	-				+0.5
1,466,099	-				-1.0
1,466,099	-				-0.3
1,466,099	-				+0.5
1,467,125	+		MPMX19_01402	0.31	+0.7
1,467,125	+		MPMX19_01402	0.31	-1.0
1,467,125	+		MPMX19_01402	0.31	+1.3
1,467,125	+		MPMX19_01402	0.31	+0.6
1,467,126	-		MPMX19_01402	0.31	-1.1
1,467,126	-		MPMX19_01402	0.31	-0.1
1,467,126	-		MPMX19_01402	0.31	+0.0
1,467,143	+		MPMX19_01402	0.32	-1.9
1,467,144	-		MPMX19_01402	0.32	-0.4
1,467,144	-		MPMX19_01402	0.32	+0.2
1,467,144	-		MPMX19_01402	0.32	-0.4
1,467,250	+		MPMX19_01402	0.35	+0.6
1,467,250	+		MPMX19_01402	0.35	-0.7
1,467,250	+		MPMX19_01402	0.35	+0.3
1,467,250	+		MPMX19_01402	0.35	-2.1
1,467,250	+		MPMX19_01402	0.35	-2.9
1,467,250	+		MPMX19_01402	0.35	-0.3
1,467,250	+		MPMX19_01402	0.35	+0.0
1,467,250	+		MPMX19_01402	0.35	-1.2
1,467,250	+		MPMX19_01402	0.35	+0.3
1,467,250	+		MPMX19_01402	0.35	-1.0
1,467,250	+		MPMX19_01402	0.35	+1.0
1,467,250	+		MPMX19_01402	0.35	-0.1
1,467,251	-		MPMX19_01402	0.35	-0.7
1,467,251	-		MPMX19_01402	0.35	-0.9
1,467,251	-		MPMX19_01402	0.35	+0.3
1,467,251	-		MPMX19_01402	0.35	-1.0
1,467,251	-		MPMX19_01402	0.35	+0.0
1,467,251	-		MPMX19_01402	0.35	-0.6
1,467,251	-		MPMX19_01402	0.35	+0.6
1,467,251	-		MPMX19_01402	0.35	+0.9
1,467,251	-		MPMX19_01402	0.35	-0.3
1,467,251	-		MPMX19_01402	0.35	-1.0
1,467,251	-		MPMX19_01402	0.35	-1.9
1,467,251	-		MPMX19_01402	0.35	+0.1
1,467,251	-		MPMX19_01402	0.35	-0.3
1,467,251	-		MPMX19_01402	0.35	-0.4
1,467,251	-		MPMX19_01402	0.35	+0.0
1,467,785	+		MPMX19_01402	0.51	-0.8
1,467,786	-		MPMX19_01402	0.51	-2.0
1,467,851	+		MPMX19_01402	0.53	+0.2
1,467,851	+		MPMX19_01402	0.53	-2.7
1,467,851	+		MPMX19_01402	0.53	+0.4
1,467,851	+		MPMX19_01402	0.53	+1.4
1,467,851	+		MPMX19_01402	0.53	+0.3
1,467,851	+		MPMX19_01402	0.53	+0.3
1,467,851	+		MPMX19_01402	0.53	-0.9
1,467,851	+		MPMX19_01402	0.53	-0.8
1,467,851	+		MPMX19_01402	0.53	-0.3
1,467,851	+		MPMX19_01402	0.53	+0.3
1,467,851	+		MPMX19_01402	0.53	-0.3
1,467,851	+		MPMX19_01402	0.53	+1.2
1,467,852	-		MPMX19_01402	0.53	-0.8
1,467,852	-		MPMX19_01402	0.53	-1.0
1,467,852	-		MPMX19_01402	0.53	+0.0
1,467,852	-		MPMX19_01402	0.53	-0.6
1,467,852	-		MPMX19_01402	0.53	-0.2
1,467,852	-		MPMX19_01402	0.53	-2.2
1,467,852	-		MPMX19_01402	0.53	-1.6
1,467,852	-		MPMX19_01402	0.53	-0.9
1,467,852	-		MPMX19_01402	0.53	-0.9
1,467,852	-		MPMX19_01402	0.53	+0.2
1,468,194	+		MPMX19_01402	0.64	+0.4
1,468,194	+		MPMX19_01402	0.64	+0.6
1,468,195	-		MPMX19_01402	0.64	-1.9
1,468,195	-		MPMX19_01402	0.64	+0.0
1,468,195	-		MPMX19_01402	0.64	+0.3
1,468,196	+		MPMX19_01402	0.64	+1.2
1,468,196	+		MPMX19_01402	0.64	+1.2
1,468,196	+		MPMX19_01402	0.64	-1.2
1,468,196	+		MPMX19_01402	0.64	+1.6
1,468,196	+		MPMX19_01402	0.64	-0.4
1,468,196	+		MPMX19_01402	0.64	-0.4
1,468,197	-		MPMX19_01402	0.64	-2.0
1,468,197	-		MPMX19_01402	0.64	-0.4
1,468,197	-		MPMX19_01402	0.64	+0.6
1,468,197	-		MPMX19_01402	0.64	-0.4
1,468,197	-		MPMX19_01402	0.64	-0.1
1,468,197	-		MPMX19_01402	0.64	+1.0
1,468,197	-		MPMX19_01402	0.64	-0.2
1,468,197	-		MPMX19_01402	0.64	+0.2
1,468,895	+		MPMX19_01402	0.85	-0.1
1,468,896	-		MPMX19_01402	0.85	-0.7
1,468,896	-		MPMX19_01402	0.85	-0.2
1,468,896	-		MPMX19_01402	0.85	-2.1
1,468,899	+		MPMX19_01402	0.85	+1.6
1,468,899	+		MPMX19_01402	0.85	-1.0
1,468,899	+		MPMX19_01402	0.85	-0.4
1,468,899	+		MPMX19_01402	0.85	-0.8
1,468,899	+		MPMX19_01402	0.85	+0.4
1,468,899	+		MPMX19_01402	0.85	+0.2
1,468,899	+		MPMX19_01402	0.85	-0.4
1,468,899	+		MPMX19_01402	0.85	-1.9
1,468,899	+		MPMX19_01402	0.85	-0.6
1,468,899	+		MPMX19_01402	0.85	-1.0
1,468,899	+		MPMX19_01402	0.85	-1.7
1,468,899	+		MPMX19_01402	0.85	-1.2
1,468,899	+		MPMX19_01402	0.85	-0.6
1,468,899	+		MPMX19_01402	0.85	-0.3
1,468,899	+		MPMX19_01402	0.85	-0.3
1,468,899	+		MPMX19_01402	0.85	-0.7
1,468,899	+		MPMX19_01402	0.85	-0.2
1,468,900	-		MPMX19_01402	0.85	+1.6
1,468,900	-		MPMX19_01402	0.85	-2.2
1,468,900	-		MPMX19_01402	0.85	-0.1
1,468,900	-		MPMX19_01402	0.85	+0.7
1,468,900	-		MPMX19_01402	0.85	-0.4
1,468,900	-		MPMX19_01402	0.85	+0.0
1,468,900	-		MPMX19_01402	0.85	+0.8
1,468,900	-		MPMX19_01402	0.85	-1.0
1,468,900	-		MPMX19_01402	0.85	-1.1
1,468,900	-		MPMX19_01402	0.85	-0.6
1,468,900	-		MPMX19_01402	0.85	+0.0
1,468,900	-		MPMX19_01402	0.85	+1.1
1,468,900	-		MPMX19_01402	0.85	-1.0
1,468,900	-		MPMX19_01402	0.85	-0.3
1,468,900	-		MPMX19_01402	0.85	+2.0
1,468,900	-		MPMX19_01402	0.85	-2.0
1,469,288	+				-1.3
1,469,288	+				-0.1
1,469,288	+				-1.0
1,469,288	+				+0.9
1,469,288	+				+0.6
1,469,288	+				+0.0
1,469,289	-				-0.4
1,469,289	-				+0.6
1,469,289	-				-0.7
1,469,289	-				-2.0
1,469,289	-				-2.6
1,469,289	-				-0.3
1,469,289	-				+1.6
1,469,289	-				+0.5
1,469,438	+				-0.6
1,469,438	+				-0.2
1,469,438	+				+0.0
1,469,438	+				+0.4
1,469,438	+				+0.4
1,469,438	+				-1.2
1,469,438	+				-1.4
1,469,438	+				-1.4
1,469,438	+				+0.4
1,469,438	+				+0.6
1,469,439	-				+0.6
1,469,439	-				-0.5
1,469,439	-				+0.2
1,469,439	-				-0.3
1,469,439	-				+0.3
1,469,439	-				-0.6
1,469,439	-				+1.6
1,469,439	-				-0.9
1,469,439	-				+0.4
1,469,439	-				-2.9
1,469,440	+				-1.4
1,469,440	+				-0.1
1,469,440	+				-1.2
1,469,440	+				-1.0
1,469,440	+				+0.7
1,469,440	+				-0.3
1,469,440	+				-0.7
1,469,440	+				-1.4
1,469,440	+				-1.9
1,469,440	+				-2.1
1,469,440	+				-1.0
1,469,440	+				+0.6
1,469,440	+				-1.6
1,469,440	+				-0.8
1,469,440	+				-1.1
1,469,440	+				+1.6
1,469,440	+				-0.4
1,469,440	+				-2.1
1,469,440	+				-0.4
1,469,440	+				-1.4
1,469,440	+				-2.8
1,469,440	+				+0.3
1,469,440	+				+0.0
1,469,440	+				+0.0
1,469,441	-				-1.0
1,469,441	-				+0.4
1,469,441	-				-2.6
1,469,441	-				+0.3
1,469,441	-				-1.1
1,469,441	-				-1.3
1,469,441	-				+1.0
1,469,441	-				-0.7
1,469,441	-				+0.6
1,469,441	-				-0.4
1,469,441	-				-0.3
1,469,441	-				+1.1
1,469,441	-				-0.7
1,469,441	-				+0.2
1,469,441	-				+0.6
1,469,441	-				-0.4
1,469,441	-				+0.0
1,469,441	-				+0.6
1,469,441	-				+0.7
1,469,441	-				-0.1
1,469,441	-				-0.9
1,469,441	-				+0.0
1,469,441	-				-0.5
1,469,441	-				-2.4
1,469,441	-				-0.1
1,469,441	-				+0.7
1,469,441	-				-1.6
1,469,441	-				-0.5
1,469,441	-				-1.6
1,469,441	-				+1.2
1,469,441	-				-1.1
1,469,501	-				-0.2
1,469,506	-				+1.0
1,469,817	+		MPMX19_01403	0.88	-1.6
1,469,817	+		MPMX19_01403	0.88	+0.4
1,469,817	+		MPMX19_01403	0.88	-0.6
1,469,817	+		MPMX19_01403	0.88	-0.2
1,469,817	+		MPMX19_01403	0.88	-0.6
1,469,817	+		MPMX19_01403	0.88	-1.8
1,469,817	+		MPMX19_01403	0.88	+1.6
1,469,817	+		MPMX19_01403	0.88	-1.0
1,469,818	-		MPMX19_01403	0.89	-0.9
1,469,818	-		MPMX19_01403	0.89	-0.7
1,469,818	-		MPMX19_01403	0.89	+0.3
1,469,818	-		MPMX19_01403	0.89	+1.0
1,469,818	-		MPMX19_01403	0.89	-0.3
1,469,818	-		MPMX19_01403	0.89	+0.6
1,469,818	-		MPMX19_01403	0.89	+0.4
1,469,818	-		MPMX19_01403	0.89	+0.1
1,469,818	-		MPMX19_01403	0.89	+0.5
1,469,818	-		MPMX19_01403	0.89	+0.8
1,469,818	-		MPMX19_01403	0.89	+0.2
1,469,844	+				+0.0
1,469,845	-				-1.2
1,469,845	-				+0.4
1,469,845	-				-0.4
1,469,845	-				+0.0
1,469,886	-				-0.3
1,469,991	+				-0.6
1,469,991	+				-1.4
1,469,991	+				-1.6
1,469,991	+				+0.4
1,469,991	+				-1.7
1,469,991	+				-1.1
1,469,991	+				+1.2
1,469,991	+				+0.3
1,469,992	-				-0.6
1,469,992	-				-1.2
1,469,992	-				+1.1
1,469,992	-				+0.4
1,470,175	+		MPMX19_01404	0.20	-0.2
1,470,176	-		MPMX19_01404	0.20	+0.2
1,470,241	+		MPMX19_01404	0.28	-0.6
1,470,241	+		MPMX19_01404	0.28	-1.3
1,470,241	+		MPMX19_01404	0.28	+0.2
1,470,241	+		MPMX19_01404	0.28	-0.6
1,470,241	+		MPMX19_01404	0.28	-1.4
1,470,241	+		MPMX19_01404	0.28	+0.7
1,470,241	+		MPMX19_01404	0.28	+0.6
1,470,241	+		MPMX19_01404	0.28	+1.3
1,470,241	+		MPMX19_01404	0.28	-1.0
1,470,241	+		MPMX19_01404	0.28	+0.6
1,470,241	+		MPMX19_01404	0.28	-0.9
1,470,241	+		MPMX19_01404	0.28	+0.8
1,470,242	-		MPMX19_01404	0.28	-0.2
1,470,242	-		MPMX19_01404	0.28	-1.2
1,470,242	-		MPMX19_01404	0.28	-1.3
1,470,242	-		MPMX19_01404	0.28	-0.1
1,470,242	-		MPMX19_01404	0.28	-1.2
1,470,242	-		MPMX19_01404	0.28	-1.4
1,470,242	-		MPMX19_01404	0.28	-1.4
1,470,242	-		MPMX19_01404	0.28	+0.2
1,470,242	-		MPMX19_01404	0.28	-1.2
1,470,242	-		MPMX19_01404	0.28	+0.5
1,470,242	-		MPMX19_01404	0.28	+1.2
1,470,242	-		MPMX19_01404	0.28	+0.3
1,470,242	-		MPMX19_01404	0.28	+0.4
1,470,242	-		MPMX19_01404	0.28	-0.6
1,470,304	+		MPMX19_01404	0.35	+0.4
1,470,304	+		MPMX19_01404	0.35	-0.5
1,470,304	+		MPMX19_01404	0.35	-1.4
1,470,304	+		MPMX19_01404	0.35	-2.2
1,470,304	+		MPMX19_01404	0.35	+0.1
1,470,304	+		MPMX19_01404	0.35	+0.2
1,470,304	+		MPMX19_01404	0.35	-0.6
1,470,304	+		MPMX19_01404	0.35	-0.1
1,470,304	+		MPMX19_01404	0.35	+1.1
1,470,304	+		MPMX19_01404	0.35	-1.3
1,470,305	-		MPMX19_01404	0.36	+0.5
1,470,305	-		MPMX19_01404	0.36	+0.1
1,470,368	-		MPMX19_01404	0.43	-0.3