Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01345

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,398,715	+		MPMX19_01344	0.58	-1.4
1,398,715	+		MPMX19_01344	0.58	+0.7
1,398,715	+		MPMX19_01344	0.58	-0.1
1,398,715	+		MPMX19_01344	0.58	-1.6
1,398,716	-		MPMX19_01344	0.58	+0.6
1,398,716	-		MPMX19_01344	0.58	+0.1
1,398,716	-		MPMX19_01344	0.58	+0.4
1,398,716	-		MPMX19_01344	0.58	+1.0
1,398,716	-		MPMX19_01344	0.58	-0.3
1,398,736	+		MPMX19_01344	0.62	-0.2
1,398,736	+		MPMX19_01344	0.62	+1.1
1,398,736	+		MPMX19_01344	0.62	+1.1
1,398,736	+		MPMX19_01344	0.62	-0.5
1,398,736	+		MPMX19_01344	0.62	-0.9
1,398,736	+		MPMX19_01344	0.62	-0.1
1,398,737	-		MPMX19_01344	0.62	+0.2
1,398,737	-		MPMX19_01344	0.62	-0.9
1,398,737	-		MPMX19_01344	0.62	+0.4
1,398,737	-		MPMX19_01344	0.62	-0.0
1,398,737	-		MPMX19_01344	0.62	-0.4
1,398,737	-		MPMX19_01344	0.62	+1.2
1,398,737	-		MPMX19_01344	0.62	+0.1
1,398,737	-		MPMX19_01344	0.62	-0.6
1,398,774	+		MPMX19_01344	0.69	+1.3
1,398,774	+		MPMX19_01344	0.69	-0.1
1,398,774	+		MPMX19_01344	0.69	-1.7
1,398,774	+		MPMX19_01344	0.69	-0.4
1,398,774	+		MPMX19_01344	0.69	-0.3
1,398,774	+		MPMX19_01344	0.69	-0.6
1,398,775	-		MPMX19_01344	0.69	-0.1
1,398,775	-		MPMX19_01344	0.69	+0.4
1,398,775	-		MPMX19_01344	0.69	-0.6
1,398,775	-		MPMX19_01344	0.69	-0.8
1,398,775	-		MPMX19_01344	0.69	-2.0
1,398,775	-		MPMX19_01344	0.69	-1.4
1,398,775	-		MPMX19_01344	0.69	+0.4
1,398,775	-		MPMX19_01344	0.69	-1.0
1,398,775	-		MPMX19_01344	0.69	-1.2
1,398,819	+		MPMX19_01344	0.77	+1.0
1,398,819	+		MPMX19_01344	0.77	-1.2
1,398,920	+				-2.2
1,398,920	+				+0.1
1,398,920	+				-0.0
1,398,921	-				-0.0
1,398,921	-				-0.6
1,399,007	+				+0.1
1,399,008	-				-0.2
1,399,045	+				-0.9
1,399,045	+				-0.8
1,399,045	+				-0.0
1,399,045	+				-0.8
1,399,045	+				+0.3
1,399,046	-				-0.4
1,399,046	-				+0.7
1,399,046	-				-0.8
1,399,046	-				-0.0
1,399,046	-				-0.8
1,399,046	-				-0.9
1,399,047	+				-0.9
1,399,048	-				-1.1
1,399,048	-				-0.0
1,399,048	-				-0.8
1,399,057	+				-0.8
1,399,058	-				+0.6
1,399,058	-				-3.0
1,399,058	-				-1.9
1,399,058	-				-0.7
1,399,073	+				+0.8
1,399,073	+				-0.7
1,399,073	+				-0.3
1,399,073	+				+0.7
1,399,073	+				-0.0
1,399,073	+				-1.1
1,399,073	+				-0.1
1,399,074	-				-0.0
1,399,074	-				+0.6
1,399,074	-				-0.9
1,399,074	-				-1.8
1,399,074	-				-1.1
1,399,074	-				-2.8
1,399,104	+				+1.6
1,399,104	+				-1.4
1,399,104	+				+0.2
1,399,105	-				-0.3
1,399,105	-				-1.1
1,399,105	-				-1.2
1,399,105	-				+0.3
1,399,105	-				-0.2
1,399,105	-				-0.5
1,399,115	+				+0.8
1,399,116	-				+0.2
1,399,116	-				-0.9
1,399,119	+				-0.4
1,399,119	+				-0.7
1,399,120	-				-1.6
1,399,120	-				-1.2
1,399,120	-				+0.6
1,399,120	-				+0.1
1,399,120	-				-0.4
1,399,120	-				+0.1
1,399,210	-				-0.6
1,399,210	-				-0.4
1,399,261	+				-2.0
1,399,262	-				-0.8
1,399,262	-				-0.2
1,399,262	-				-1.5
1,399,267	-				+1.0
1,399,267	-				-0.1
1,399,282	+				-2.0
1,399,311	-				-1.0
1,399,311	-				-0.9
1,399,311	-				-0.8
1,399,368	-				-1.3
1,399,368	-				-0.2
1,399,504	-				-0.4
1,399,515	+				-1.4
1,399,515	+				+0.6
1,399,515	+				-1.3
1,399,536	+				-1.4
1,399,536	+				-0.9
1,399,537	-				-0.2
1,399,537	-				+2.6
1,399,537	-				+0.2
1,399,537	-				-1.6
1,399,629	-		MPMX19_01345	0.11	-0.9
1,399,629	-		MPMX19_01345	0.11	+0.2
1,399,643	+		MPMX19_01345	0.11	-1.0
1,399,643	+		MPMX19_01345	0.11	-0.4
1,399,647	-		MPMX19_01345	0.12	-0.4
1,399,693	+		MPMX19_01345	0.14	-0.6
1,399,693	+		MPMX19_01345	0.14	+0.6
1,399,693	+		MPMX19_01345	0.14	-2.0
1,399,693	+		MPMX19_01345	0.14	+0.6
1,399,694	-		MPMX19_01345	0.14	-0.7
1,399,694	-		MPMX19_01345	0.14	-0.8
1,399,694	-		MPMX19_01345	0.14	-1.4
1,399,694	-		MPMX19_01345	0.14	-2.1
1,399,694	-		MPMX19_01345	0.14	-1.6
1,399,696	+		MPMX19_01345	0.14	-0.5
1,399,697	-		MPMX19_01345	0.15	-0.0
1,399,697	-		MPMX19_01345	0.15	+1.2
1,399,697	-		MPMX19_01345	0.15	+0.1
1,399,757	+		MPMX19_01345	0.18	-0.2
1,399,797	-		MPMX19_01345	0.20	-1.8
1,399,797	-		MPMX19_01345	0.20	-0.8
1,399,817	+		MPMX19_01345	0.22	-0.9
1,399,817	+		MPMX19_01345	0.22	-0.2
1,399,817	+		MPMX19_01345	0.22	+0.0
1,399,818	-		MPMX19_01345	0.22	+0.2
1,399,818	-		MPMX19_01345	0.22	-0.2
1,399,826	+		MPMX19_01345	0.22	+1.0
1,399,826	+		MPMX19_01345	0.22	+0.8
1,399,826	+		MPMX19_01345	0.22	-1.4
1,399,826	+		MPMX19_01345	0.22	-0.1
1,399,826	+		MPMX19_01345	0.22	-1.5
1,399,826	+		MPMX19_01345	0.22	+0.3
1,399,827	-		MPMX19_01345	0.22	+1.0
1,399,827	-		MPMX19_01345	0.22	-1.6
1,399,827	-		MPMX19_01345	0.22	-0.3
1,399,827	-		MPMX19_01345	0.22	+0.6
1,399,827	-		MPMX19_01345	0.22	-0.4
1,399,827	-		MPMX19_01345	0.22	-1.3
1,399,896	+		MPMX19_01345	0.26	+1.0
1,399,896	+		MPMX19_01345	0.26	-1.2
1,399,896	+		MPMX19_01345	0.26	+0.1
1,399,896	+		MPMX19_01345	0.26	+0.2
1,399,896	+		MPMX19_01345	0.26	-1.4
1,399,896	+		MPMX19_01345	0.26	-0.2
1,399,896	+		MPMX19_01345	0.26	-0.2
1,399,896	+		MPMX19_01345	0.26	+0.6
1,399,896	+		MPMX19_01345	0.26	+1.0
1,399,896	+		MPMX19_01345	0.26	-1.6
1,399,896	+		MPMX19_01345	0.26	+0.2
1,399,896	+		MPMX19_01345	0.26	+1.3
1,399,896	+		MPMX19_01345	0.26	-1.4
1,399,896	+		MPMX19_01345	0.26	-1.0
1,399,897	-		MPMX19_01345	0.26	-1.4
1,399,897	-		MPMX19_01345	0.26	+0.2
1,399,897	-		MPMX19_01345	0.26	-1.0
1,399,897	-		MPMX19_01345	0.26	-0.2
1,399,897	-		MPMX19_01345	0.26	+0.4
1,399,897	-		MPMX19_01345	0.26	-1.4
1,399,897	-		MPMX19_01345	0.26	-0.9
1,399,897	-		MPMX19_01345	0.26	+0.1
1,399,897	-		MPMX19_01345	0.26	-0.6
1,399,897	-		MPMX19_01345	0.26	-1.2
1,399,897	-		MPMX19_01345	0.26	+0.5
1,399,897	-		MPMX19_01345	0.26	-1.8
1,399,897	-		MPMX19_01345	0.26	-0.4
1,399,897	-		MPMX19_01345	0.26	-0.4
1,399,897	-		MPMX19_01345	0.26	+0.5
1,399,897	-		MPMX19_01345	0.26	+0.8
1,399,897	-		MPMX19_01345	0.26	-0.2
1,399,897	-		MPMX19_01345	0.26	-0.9
1,399,897	-		MPMX19_01345	0.26	-0.8
1,399,897	-		MPMX19_01345	0.26	-0.3
1,399,897	-		MPMX19_01345	0.26	-0.1
1,399,898	+		MPMX19_01345	0.26	-1.1
1,399,898	+		MPMX19_01345	0.26	-0.0
1,399,898	+		MPMX19_01345	0.26	-1.1
1,399,898	+		MPMX19_01345	0.26	-1.1
1,399,898	+		MPMX19_01345	0.26	-0.2
1,399,898	+		MPMX19_01345	0.26	-0.4
1,399,899	-		MPMX19_01345	0.26	-0.6
1,399,899	-		MPMX19_01345	0.26	-0.0
1,399,899	-		MPMX19_01345	0.26	+0.1
1,399,899	-		MPMX19_01345	0.26	-0.0
1,399,899	-		MPMX19_01345	0.26	+0.3
1,399,899	-		MPMX19_01345	0.26	+1.0
1,399,899	-		MPMX19_01345	0.26	-0.8
1,399,899	-		MPMX19_01345	0.26	-0.8
1,399,899	-		MPMX19_01345	0.26	+0.0
1,399,899	-		MPMX19_01345	0.26	-0.2
1,400,009	+		MPMX19_01345	0.33	+0.2
1,400,009	+		MPMX19_01345	0.33	-1.0
1,400,009	+		MPMX19_01345	0.33	-0.9
1,400,010	-		MPMX19_01345	0.33	-1.6
1,401,129	+				+1.3
1,401,129	+				+0.9
1,401,129	+				-0.9
1,401,129	+				+0.4
1,401,129	+				+2.1
1,401,129	+				-0.2
1,401,129	+				-0.9
1,401,129	+				-0.4
1,401,129	+				+0.5
1,401,129	+				+0.6
1,401,129	+				-1.0
1,401,129	+				-0.4
1,401,129	+				+0.9
1,401,129	+				-0.9
1,401,129	+				-0.0
1,401,129	+				+0.3
1,401,129	+				+0.4
1,401,129	+				+0.7
1,401,129	+				+0.2
1,401,129	+				-0.6
1,401,129	+				-1.4
1,401,129	+				-1.9
1,401,130	-				-0.1
1,401,130	-				-0.3
1,401,130	-				+0.5
1,401,130	-				+0.6
1,401,130	-				+0.3
1,401,130	-				+0.0
1,401,130	-				-0.2
1,401,130	-				-0.6
1,401,130	-				-0.8
1,401,130	-				-0.4
1,401,130	-				-0.4
1,401,130	-				-0.9
1,401,130	-				-0.1
1,401,130	-				-0.9
1,401,130	-				-0.7
1,401,130	-				-0.1
1,401,130	-				+0.1
1,401,193	+				+0.3
1,401,193	+				-1.6
1,401,193	+				+0.7
1,401,194	-				+0.4
1,401,194	-				-1.9
1,401,277	+		MPMX19_01346	0.12	-1.1
1,401,277	+		MPMX19_01346	0.12	-0.0
1,401,277	+		MPMX19_01346	0.12	-0.0
1,401,277	+		MPMX19_01346	0.12	-0.9
1,401,277	+		MPMX19_01346	0.12	+0.1
1,401,277	+		MPMX19_01346	0.12	-0.8
1,401,277	+		MPMX19_01346	0.12	+0.6
1,401,277	+		MPMX19_01346	0.12	-0.4
1,401,277	+		MPMX19_01346	0.12	-0.0
1,401,277	+		MPMX19_01346	0.12	+0.0
1,401,277	+		MPMX19_01346	0.12	-0.0
1,401,277	+		MPMX19_01346	0.12	+0.6
1,401,277	+		MPMX19_01346	0.12	-0.7
1,401,277	+		MPMX19_01346	0.12	+0.1
1,401,277	+		MPMX19_01346	0.12	-0.2
1,401,277	+		MPMX19_01346	0.12	+1.2
1,401,277	+		MPMX19_01346	0.12	-1.6
1,401,277	+		MPMX19_01346	0.12	+0.2
1,401,278	-		MPMX19_01346	0.12	-1.4
1,401,278	-		MPMX19_01346	0.12	-0.1
1,401,278	-		MPMX19_01346	0.12	-1.3
1,401,278	-		MPMX19_01346	0.12	-1.2
1,401,278	-		MPMX19_01346	0.12	+0.1
1,401,278	-		MPMX19_01346	0.12	-1.2
1,401,278	-		MPMX19_01346	0.12	-1.6
1,401,278	-		MPMX19_01346	0.12	-1.4
1,401,278	-		MPMX19_01346	0.12	-0.2
1,401,278	-		MPMX19_01346	0.12	+0.8
1,401,278	-		MPMX19_01346	0.12	+0.2
1,401,316	+		MPMX19_01346	0.18	-0.4
1,401,316	+		MPMX19_01346	0.18	-0.4
1,401,316	+		MPMX19_01346	0.18	+0.1
1,401,316	+		MPMX19_01346	0.18	+1.4
1,401,316	+		MPMX19_01346	0.18	+0.5
1,401,316	+		MPMX19_01346	0.18	-3.1
1,401,316	+		MPMX19_01346	0.18	-0.9
1,401,316	+		MPMX19_01346	0.18	-0.8
1,401,316	+		MPMX19_01346	0.18	-0.2
1,401,316	+		MPMX19_01346	0.18	-0.2
1,401,316	+		MPMX19_01346	0.18	-1.0
1,401,317	-		MPMX19_01346	0.18	-0.7
1,401,317	-		MPMX19_01346	0.18	-0.4
1,401,317	-		MPMX19_01346	0.18	-0.4
1,401,317	-		MPMX19_01346	0.18	+0.1
1,401,317	-		MPMX19_01346	0.18	-0.0
1,401,317	-		MPMX19_01346	0.18	-0.1
1,401,317	-		MPMX19_01346	0.18	-1.0
1,401,317	-		MPMX19_01346	0.18	-1.1
1,401,322	+		MPMX19_01346	0.19	-0.2
1,401,322	+		MPMX19_01346	0.19	-2.1
1,401,322	+		MPMX19_01346	0.19	+1.0
1,401,322	+		MPMX19_01346	0.19	-0.6
1,401,322	+		MPMX19_01346	0.19	+0.6
1,401,322	+		MPMX19_01346	0.19	+0.1
1,401,322	+		MPMX19_01346	0.19	-0.9
1,401,322	+		MPMX19_01346	0.19	-0.8
1,401,322	+		MPMX19_01346	0.19	-0.2
1,401,322	+		MPMX19_01346	0.19	-0.8
1,401,322	+		MPMX19_01346	0.19	+0.4
1,401,322	+		MPMX19_01346	0.19	-1.9
1,401,322	+		MPMX19_01346	0.19	+1.0
1,401,322	+		MPMX19_01346	0.19	+0.8
1,401,322	+		MPMX19_01346	0.19	-0.6
1,401,322	+		MPMX19_01346	0.19	+0.9
1,401,322	+		MPMX19_01346	0.19	+0.3
1,401,322	+		MPMX19_01346	0.19	+0.8
1,401,322	+		MPMX19_01346	0.19	-1.8
1,401,322	+		MPMX19_01346	0.19	-0.2
1,401,322	+		MPMX19_01346	0.19	-0.8
1,401,322	+		MPMX19_01346	0.19	-0.2
1,401,322	+		MPMX19_01346	0.19	+0.1
1,401,323	-		MPMX19_01346	0.19	+0.8
1,401,323	-		MPMX19_01346	0.19	+0.4
1,401,323	-		MPMX19_01346	0.19	-1.8
1,401,323	-		MPMX19_01346	0.19	-0.0
1,401,323	-		MPMX19_01346	0.19	+0.6
1,401,323	-		MPMX19_01346	0.19	-1.2
1,401,323	-		MPMX19_01346	0.19	+0.8
1,401,323	-		MPMX19_01346	0.19	+0.4
1,401,323	-		MPMX19_01346	0.19	-0.7
1,401,323	-		MPMX19_01346	0.19	-0.6
1,401,323	-		MPMX19_01346	0.19	-2.2
1,401,323	-		MPMX19_01346	0.19	-0.5
1,401,323	-		MPMX19_01346	0.19	-1.6
1,401,323	-		MPMX19_01346	0.19	-0.4
1,401,323	-		MPMX19_01346	0.19	-0.3
1,401,323	-		MPMX19_01346	0.19	-0.9
1,401,323	-		MPMX19_01346	0.19	+1.1
1,401,323	-		MPMX19_01346	0.19	+0.8
1,401,323	-		MPMX19_01346	0.19	-1.1
1,401,323	-		MPMX19_01346	0.19	-1.0
1,401,323	-		MPMX19_01346	0.19	-0.6
1,401,323	-		MPMX19_01346	0.19	+0.1
1,401,323	-		MPMX19_01346	0.19	-0.4
1,401,406	+		MPMX19_01346	0.31	-0.4
1,401,406	+		MPMX19_01346	0.31	-0.8
1,401,407	-		MPMX19_01346	0.31	-0.0
1,401,407	-		MPMX19_01346	0.31	+0.4
1,401,415	+		MPMX19_01346	0.32	+0.1
1,401,415	+		MPMX19_01346	0.32	-0.4
1,401,415	+		MPMX19_01346	0.32	-1.0
1,401,415	+		MPMX19_01346	0.32	+1.1
1,401,415	+		MPMX19_01346	0.32	-1.1
1,401,416	-		MPMX19_01346	0.32	-0.2
1,401,416	-		MPMX19_01346	0.32	+0.7
1,401,416	-		MPMX19_01346	0.32	+0.3
1,401,416	-		MPMX19_01346	0.32	-0.8
1,401,416	-		MPMX19_01346	0.32	-1.1
1,401,416	-		MPMX19_01346	0.32	+0.3
1,401,416	-		MPMX19_01346	0.32	-2.0
1,401,416	-		MPMX19_01346	0.32	-0.0
1,401,416	-		MPMX19_01346	0.32	+0.2
1,401,416	-		MPMX19_01346	0.32	+1.6
1,401,416	-		MPMX19_01346	0.32	-2.3
1,401,427	+		MPMX19_01346	0.34	-1.8
1,401,427	+		MPMX19_01346	0.34	-0.9
1,401,428	-		MPMX19_01346	0.34	+0.7
1,401,428	-		MPMX19_01346	0.34	-0.0
1,401,428	-		MPMX19_01346	0.34	+0.3
1,401,428	-		MPMX19_01346	0.34	-1.1
1,401,589	+		MPMX19_01346	0.57	-1.4
1,401,589	+		MPMX19_01346	0.57	+0.9
1,401,589	+		MPMX19_01346	0.57	+0.8
1,401,590	-		MPMX19_01346	0.57	+0.6
1,401,590	-		MPMX19_01346	0.57	-0.3
1,401,590	-		MPMX19_01346	0.57	+0.6
1,401,590	-		MPMX19_01346	0.57	+0.6
1,401,607	+		MPMX19_01346	0.60	-1.2
1,401,607	+		MPMX19_01346	0.60	+0.1
1,401,625	+		MPMX19_01346	0.62	-0.8
1,401,625	+		MPMX19_01346	0.62	-2.0
1,401,625	+		MPMX19_01346	0.62	-0.8
1,401,625	+		MPMX19_01346	0.62	-0.7
1,401,625	+		MPMX19_01346	0.62	-0.3
1,401,625	+		MPMX19_01346	0.62	-1.1
1,401,626	-		MPMX19_01346	0.63	-0.3
1,401,626	-		MPMX19_01346	0.63	-0.0
1,401,626	-		MPMX19_01346	0.63	+0.4
1,401,626	-		MPMX19_01346	0.63	+0.9
1,401,626	-		MPMX19_01346	0.63	+0.6
1,401,758	-		MPMX19_01346	0.82	-0.4
1,401,758	-		MPMX19_01346	0.82	-0.6
1,401,820	+				+0.2
1,401,820	+				-1.8
1,401,820	+				-1.6
1,401,821	-				-1.1
1,401,821	-				-0.4
1,401,821	-				-0.5
1,401,821	-				+0.7
1,401,871	+				-1.6
1,401,871	+				-0.0
1,401,872	-				-0.7
1,401,872	-				-1.0
1,401,872	-				-2.4
1,401,872	-				-1.4
1,401,872	-				+0.4
1,401,872	-				-0.4
1,401,872	-				+0.7
1,402,013	+				-0.4
1,402,013	+				-1.8
1,402,013	+				-0.4
1,402,013	+				+0.3
1,402,013	+				-0.2
1,402,013	+				-0.4
1,402,014	-				+1.6
1,402,014	-				-1.9
1,402,014	-				-0.2
1,402,014	-				-0.6
1,402,102	+				-1.8
1,402,102	+				-1.6
1,402,102	+				+0.8
1,402,102	+				-2.1
1,402,102	+				-0.8
1,402,102	+				-1.4
1,402,102	+				+1.6
1,402,103	-				-1.2
1,402,103	-				-0.8
1,402,103	-				-0.6
1,402,103	-				+0.6
1,402,103	-				-0.4
1,402,103	-				-0.9
1,402,103	-				-0.9
1,402,115	+		MPMX19_01347	0.11	-0.6
1,402,115	+		MPMX19_01347	0.11	+0.2
1,402,115	+		MPMX19_01347	0.11	-0.4
1,402,115	+		MPMX19_01347	0.11	-1.6
1,402,115	+		MPMX19_01347	0.11	-0.2
1,402,115	+		MPMX19_01347	0.11	+0.6
1,402,115	+		MPMX19_01347	0.11	+1.6
1,402,116	-		MPMX19_01347	0.11	+0.3
1,402,116	-		MPMX19_01347	0.11	+0.2
1,402,116	-		MPMX19_01347	0.11	+0.6
1,402,116	-		MPMX19_01347	0.11	-1.0
1,402,116	-		MPMX19_01347	0.11	-0.6
1,402,116	-		MPMX19_01347	0.11	-0.0