Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01300

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,356,635	+				-0.5
1,356,663	-				-1.1
1,356,724	+				-1.0
1,356,724	+				-0.5
1,356,724	+				-1.5
1,356,724	+				+0.2
1,356,724	+				+0.0
1,356,724	+				+0.4
1,356,724	+				-0.5
1,356,724	+				-0.2
1,356,724	+				-0.3
1,356,724	+				+0.1
1,356,724	+				-0.1
1,356,724	+				-0.5
1,356,724	+				-2.5
1,356,724	+				+0.0
1,356,724	+				-1.2
1,356,724	+				-0.6
1,356,724	+				-0.6
1,356,724	+				-2.2
1,356,724	+				-1.3
1,356,724	+				-1.3
1,356,725	-				+0.2
1,356,725	-				-0.0
1,356,725	-				-0.1
1,356,725	-				-0.3
1,356,725	-				+0.2
1,356,725	-				-2.2
1,356,725	-				-0.4
1,356,725	-				-1.0
1,356,725	-				+0.4
1,356,725	-				+0.1
1,356,725	-				-0.7
1,356,725	-				-0.8
1,356,725	-				-1.4
1,356,725	-				+0.3
1,356,725	-				-2.1
1,356,725	-				+0.3
1,356,725	-				-2.5
1,356,725	-				-1.3
1,356,725	-				-1.3
1,357,491	-				+0.3
1,357,524	+				+0.5
1,358,288	-				-1.5
1,358,288	-				+1.0
1,358,291	-				+0.4
1,358,291	-				+0.2
1,358,291	-				-0.9
1,358,306	-				-0.5
1,358,306	-				-0.8
1,358,306	-				-0.2
1,358,306	-				-1.8
1,358,306	-				+0.6
1,358,306	-				-0.7
1,358,306	-				-0.0
1,358,306	-				-1.9
1,358,590	+		MPMX19_01301	0.31	-0.7
1,358,590	+		MPMX19_01301	0.31	-0.6
1,358,590	+		MPMX19_01301	0.31	-0.2
1,358,590	+		MPMX19_01301	0.31	+0.8
1,358,590	+		MPMX19_01301	0.31	-1.1
1,358,590	+		MPMX19_01301	0.31	-0.2
1,358,590	+		MPMX19_01301	0.31	-0.9
1,358,590	+		MPMX19_01301	0.31	+0.1
1,358,591	-		MPMX19_01301	0.31	+1.0
1,358,591	-		MPMX19_01301	0.31	+0.3
1,358,591	-		MPMX19_01301	0.31	-0.1
1,358,591	-		MPMX19_01301	0.31	+0.3
1,358,671	+		MPMX19_01301	0.38	-2.8
1,358,671	+		MPMX19_01301	0.38	+0.5
1,358,671	+		MPMX19_01301	0.38	+0.7
1,358,671	+		MPMX19_01301	0.38	-0.2
1,358,671	+		MPMX19_01301	0.38	-1.0
1,358,671	+		MPMX19_01301	0.38	-0.8
1,358,671	+		MPMX19_01301	0.38	-0.4
1,358,671	+		MPMX19_01301	0.38	-0.2
1,358,671	+		MPMX19_01301	0.38	-0.9
1,358,671	+		MPMX19_01301	0.38	+1.0
1,358,671	+		MPMX19_01301	0.38	-0.8
1,358,671	+		MPMX19_01301	0.38	+0.8
1,358,671	+		MPMX19_01301	0.38	-2.8
1,358,671	+		MPMX19_01301	0.38	-0.2
1,358,671	+		MPMX19_01301	0.38	-0.8
1,358,671	+		MPMX19_01301	0.38	+1.1
1,358,671	+		MPMX19_01301	0.38	-1.9
1,358,671	+		MPMX19_01301	0.38	-0.5
1,358,671	+		MPMX19_01301	0.38	-2.5
1,358,671	+		MPMX19_01301	0.38	-1.5
1,358,671	+		MPMX19_01301	0.38	-0.3
1,358,671	+		MPMX19_01301	0.38	-1.6
1,358,671	+		MPMX19_01301	0.38	-1.0
1,358,671	+		MPMX19_01301	0.38	-0.5
1,358,671	+		MPMX19_01301	0.38	-3.2
1,358,671	+		MPMX19_01301	0.38	-0.5
1,358,671	+		MPMX19_01301	0.38	-1.0
1,358,671	+		MPMX19_01301	0.38	-1.3
1,358,671	+		MPMX19_01301	0.38	-1.5
1,358,671	+		MPMX19_01301	0.38	+1.3
1,358,671	+		MPMX19_01301	0.38	+1.0
1,358,671	+		MPMX19_01301	0.38	-0.8
1,358,671	+		MPMX19_01301	0.38	-0.7
1,358,671	+		MPMX19_01301	0.38	-1.5
1,358,671	+		MPMX19_01301	0.38	-0.6
1,358,671	+		MPMX19_01301	0.38	-1.5
1,358,672	-		MPMX19_01301	0.38	-0.7
1,358,672	-		MPMX19_01301	0.38	-0.5
1,358,672	-		MPMX19_01301	0.38	-0.4
1,358,672	-		MPMX19_01301	0.38	-1.3
1,358,672	-		MPMX19_01301	0.38	-0.8
1,358,672	-		MPMX19_01301	0.38	+0.3
1,358,672	-		MPMX19_01301	0.38	-0.3
1,358,672	-		MPMX19_01301	0.38	+1.0
1,358,672	-		MPMX19_01301	0.38	+0.3
1,358,672	-		MPMX19_01301	0.38	-1.0
1,358,672	-		MPMX19_01301	0.38	-1.5
1,358,828	+		MPMX19_01301	0.53	+0.3
1,358,828	+		MPMX19_01301	0.53	+0.4
1,358,828	+		MPMX19_01301	0.53	-1.5
1,358,828	+		MPMX19_01301	0.53	+0.5
1,358,828	+		MPMX19_01301	0.53	-0.4
1,358,828	+		MPMX19_01301	0.53	-0.8
1,358,828	+		MPMX19_01301	0.53	+0.5
1,358,828	+		MPMX19_01301	0.53	-0.5
1,358,828	+		MPMX19_01301	0.53	-1.0
1,358,828	+		MPMX19_01301	0.53	+0.3
1,358,828	+		MPMX19_01301	0.53	-0.2
1,358,828	+		MPMX19_01301	0.53	-1.8
1,358,828	+		MPMX19_01301	0.53	-2.9
1,358,828	+		MPMX19_01301	0.53	+0.4
1,358,828	+		MPMX19_01301	0.53	-0.1
1,358,829	-		MPMX19_01301	0.53	-0.9
1,358,829	-		MPMX19_01301	0.53	+0.3
1,358,829	-		MPMX19_01301	0.53	-1.8
1,358,829	-		MPMX19_01301	0.53	-0.0
1,358,829	-		MPMX19_01301	0.53	-0.0
1,358,829	-		MPMX19_01301	0.53	-0.3
1,358,829	-		MPMX19_01301	0.53	-2.3
1,358,829	-		MPMX19_01301	0.53	+0.2
1,358,829	-		MPMX19_01301	0.53	-1.0
1,358,830	+		MPMX19_01301	0.53	+0.2
1,358,830	+		MPMX19_01301	0.53	-0.4
1,358,830	+		MPMX19_01301	0.53	-1.0
1,358,830	+		MPMX19_01301	0.53	+2.5
1,358,830	+		MPMX19_01301	0.53	-1.3
1,358,830	+		MPMX19_01301	0.53	+0.3
1,358,830	+		MPMX19_01301	0.53	-1.0
1,358,830	+		MPMX19_01301	0.53	-0.6
1,358,830	+		MPMX19_01301	0.53	-2.2
1,358,830	+		MPMX19_01301	0.53	+0.4
1,358,830	+		MPMX19_01301	0.53	-0.4
1,358,830	+		MPMX19_01301	0.53	-1.5
1,358,830	+		MPMX19_01301	0.53	-0.8
1,358,830	+		MPMX19_01301	0.53	+0.3
1,358,830	+		MPMX19_01301	0.53	-0.3
1,358,830	+		MPMX19_01301	0.53	+0.2
1,358,830	+		MPMX19_01301	0.53	-0.5
1,358,830	+		MPMX19_01301	0.53	-0.8
1,358,830	+		MPMX19_01301	0.53	-0.9
1,358,830	+		MPMX19_01301	0.53	+0.6
1,358,830	+		MPMX19_01301	0.53	-0.9
1,358,830	+		MPMX19_01301	0.53	-0.3
1,358,830	+		MPMX19_01301	0.53	-0.7
1,358,830	+		MPMX19_01301	0.53	+0.2
1,358,830	+		MPMX19_01301	0.53	+0.3
1,358,830	+		MPMX19_01301	0.53	+0.2
1,358,830	+		MPMX19_01301	0.53	-0.7
1,358,830	+		MPMX19_01301	0.53	-1.9
1,358,830	+		MPMX19_01301	0.53	-0.5
1,358,830	+		MPMX19_01301	0.53	+1.0
1,358,830	+		MPMX19_01301	0.53	-1.2
1,358,830	+		MPMX19_01301	0.53	-0.6
1,358,830	+		MPMX19_01301	0.53	-2.5
1,358,830	+		MPMX19_01301	0.53	-2.3
1,358,830	+		MPMX19_01301	0.53	+0.3
1,358,830	+		MPMX19_01301	0.53	-1.5
1,358,830	+		MPMX19_01301	0.53	-0.9
1,358,830	+		MPMX19_01301	0.53	-1.0
1,358,830	+		MPMX19_01301	0.53	+0.5
1,358,830	+		MPMX19_01301	0.53	-0.6
1,358,830	+		MPMX19_01301	0.53	+0.5
1,358,830	+		MPMX19_01301	0.53	+0.4
1,358,830	+		MPMX19_01301	0.53	-0.3
1,358,830	+		MPMX19_01301	0.53	+0.4
1,358,830	+		MPMX19_01301	0.53	-0.8
1,358,831	-		MPMX19_01301	0.53	-1.0
1,358,831	-		MPMX19_01301	0.53	-0.0
1,358,831	-		MPMX19_01301	0.53	+0.2
1,358,831	-		MPMX19_01301	0.53	-0.6
1,358,831	-		MPMX19_01301	0.53	-1.6
1,358,831	-		MPMX19_01301	0.53	-1.3
1,358,831	-		MPMX19_01301	0.53	-1.6
1,358,831	-		MPMX19_01301	0.53	+1.2
1,358,831	-		MPMX19_01301	0.53	-0.5
1,358,831	-		MPMX19_01301	0.53	+0.1
1,358,831	-		MPMX19_01301	0.53	+0.3
1,358,831	-		MPMX19_01301	0.53	-0.6
1,358,831	-		MPMX19_01301	0.53	-0.7
1,358,831	-		MPMX19_01301	0.53	+0.2
1,358,831	-		MPMX19_01301	0.53	+0.5
1,358,831	-		MPMX19_01301	0.53	+1.0
1,358,831	-		MPMX19_01301	0.53	+0.3
1,358,831	-		MPMX19_01301	0.53	-1.3
1,358,831	-		MPMX19_01301	0.53	-1.5
1,358,831	-		MPMX19_01301	0.53	+1.8
1,358,831	-		MPMX19_01301	0.53	-1.4
1,358,831	-		MPMX19_01301	0.53	-1.2
1,358,831	-		MPMX19_01301	0.53	+0.4
1,358,831	-		MPMX19_01301	0.53	+1.7
1,358,831	-		MPMX19_01301	0.53	-0.8
1,358,831	-		MPMX19_01301	0.53	-0.3
1,358,831	-		MPMX19_01301	0.53	-0.9
1,358,831	-		MPMX19_01301	0.53	+0.1
1,358,831	-		MPMX19_01301	0.53	-1.0
1,358,831	-		MPMX19_01301	0.53	-0.3
1,358,831	-		MPMX19_01301	0.53	-1.9
1,358,831	-		MPMX19_01301	0.53	-2.2
1,358,831	-		MPMX19_01301	0.53	-2.5
1,358,831	-		MPMX19_01301	0.53	-0.5
1,358,944	+		MPMX19_01301	0.64	+0.0
1,358,944	+		MPMX19_01301	0.64	-0.9
1,358,944	+		MPMX19_01301	0.64	+1.1
1,358,944	+		MPMX19_01301	0.64	-0.5
1,358,944	+		MPMX19_01301	0.64	-0.6
1,358,944	+		MPMX19_01301	0.64	+0.3
1,358,944	+		MPMX19_01301	0.64	-1.3
1,358,944	+		MPMX19_01301	0.64	-0.7
1,358,944	+		MPMX19_01301	0.64	-0.6
1,358,944	+		MPMX19_01301	0.64	+0.4
1,358,945	-		MPMX19_01301	0.64	-1.4
1,358,945	-		MPMX19_01301	0.64	-0.5
1,358,945	-		MPMX19_01301	0.64	-3.4
1,358,945	-		MPMX19_01301	0.64	-1.0
1,358,945	-		MPMX19_01301	0.64	-0.0
1,358,945	-		MPMX19_01301	0.64	-0.0
1,358,945	-		MPMX19_01301	0.64	-1.9
1,358,945	-		MPMX19_01301	0.64	-0.1
1,358,945	-		MPMX19_01301	0.64	+0.5
1,358,945	-		MPMX19_01301	0.64	-0.9
1,358,945	-		MPMX19_01301	0.64	-1.8
1,358,945	-		MPMX19_01301	0.64	-0.0
1,358,945	-		MPMX19_01301	0.64	-0.8
1,358,945	-		MPMX19_01301	0.64	-0.5
1,358,945	-		MPMX19_01301	0.64	-1.6
1,358,945	-		MPMX19_01301	0.64	-0.0
1,358,945	-		MPMX19_01301	0.64	+1.5
1,358,945	-		MPMX19_01301	0.64	-0.5
1,359,046	+		MPMX19_01301	0.73	-0.7
1,359,046	+		MPMX19_01301	0.73	-0.0
1,359,046	+		MPMX19_01301	0.73	+0.5
1,359,046	+		MPMX19_01301	0.73	+0.0
1,359,046	+		MPMX19_01301	0.73	-0.9
1,359,046	+		MPMX19_01301	0.73	+0.5
1,359,046	+		MPMX19_01301	0.73	+0.5
1,359,046	+		MPMX19_01301	0.73	-1.5
1,359,046	+		MPMX19_01301	0.73	-0.5
1,359,046	+		MPMX19_01301	0.73	-0.2
1,359,046	+		MPMX19_01301	0.73	-2.0
1,359,046	+		MPMX19_01301	0.73	+0.4
1,359,046	+		MPMX19_01301	0.73	+0.1
1,359,046	+		MPMX19_01301	0.73	-1.4
1,359,046	+		MPMX19_01301	0.73	+1.1
1,359,047	-		MPMX19_01301	0.74	-0.3
1,359,047	-		MPMX19_01301	0.74	+0.1
1,359,047	-		MPMX19_01301	0.74	-2.4
1,359,047	-		MPMX19_01301	0.74	-1.8
1,359,047	-		MPMX19_01301	0.74	-0.5
1,359,047	-		MPMX19_01301	0.74	+0.1
1,359,047	-		MPMX19_01301	0.74	-0.8
1,359,047	-		MPMX19_01301	0.74	-0.9
1,359,047	-		MPMX19_01301	0.74	-0.8
1,359,047	-		MPMX19_01301	0.74	+0.2
1,359,047	-		MPMX19_01301	0.74	-1.2
1,359,047	-		MPMX19_01301	0.74	-1.0
1,359,047	-		MPMX19_01301	0.74	-1.2
1,359,047	-		MPMX19_01301	0.74	+0.0
1,359,047	-		MPMX19_01301	0.74	-1.6
1,359,047	-		MPMX19_01301	0.74	-1.4
1,359,047	-		MPMX19_01301	0.74	+0.0
1,359,047	-		MPMX19_01301	0.74	-0.4
1,359,047	-		MPMX19_01301	0.74	-0.2
1,359,047	-		MPMX19_01301	0.74	-0.1
1,359,047	-		MPMX19_01301	0.74	-0.2
1,359,047	-		MPMX19_01301	0.74	-1.0