Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01249

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,297,268	+				+0.5
1,297,269	-				-0.5
1,297,353	+				+1.1
1,297,353	+				-0.0
1,297,353	+				-0.8
1,297,353	+				+0.5
1,297,353	+				-0.6
1,297,353	+				-2.0
1,297,353	+				-1.9
1,297,353	+				+2.1
1,297,353	+				-1.0
1,297,354	-				-0.0
1,297,354	-				-2.4
1,297,354	-				+1.0
1,297,354	-				-0.3
1,297,354	-				-0.2
1,297,392	-				-0.5
1,297,401	+				-1.4
1,297,401	+				-1.5
1,297,402	-				+0.4
1,297,418	+				-0.4
1,297,418	+				-0.2
1,297,418	+				-0.8
1,297,419	-				-0.5
1,297,422	+				-0.2
1,297,423	-				-1.5
1,297,423	-				-1.3
1,297,451	+				+0.3
1,297,451	+				-0.8
1,297,451	+				-0.0
1,297,452	-				-1.9
1,297,452	-				-0.7
1,297,452	-				-0.2
1,297,452	-				-1.0
1,297,452	-				+0.2
1,297,456	+				+0.7
1,297,494	+				-0.2
1,297,494	+				+0.4
1,297,494	+				-0.5
1,297,494	+				-1.1
1,297,591	+				-0.2
1,297,591	+				-2.2
1,297,591	+				-0.8
1,297,599	+				-1.3
1,297,600	-				-1.3
1,297,607	+				-0.4
1,297,607	+				-2.0
1,297,607	+				-0.0
1,297,608	-				-0.4
1,297,608	-				-1.6
1,297,608	-				+0.1
1,297,614	+				-0.7
1,297,614	+				-0.7
1,297,615	-				+0.7
1,297,615	-				-1.0
1,297,615	-				-2.4
1,297,615	-				+0.7
1,297,615	-				-0.5
1,297,705	+				-0.0
1,297,706	-				-0.3
1,297,717	-				-1.2
1,297,717	-				-1.5
1,297,740	+				+1.2
1,297,740	+				-0.9
1,297,741	-				-1.6
1,297,853	+		MPMX19_01248	0.21	-0.0
1,297,854	-		MPMX19_01248	0.21	+1.0
1,297,854	-		MPMX19_01248	0.21	+0.5
1,297,854	-		MPMX19_01248	0.21	-0.8
1,297,854	-		MPMX19_01248	0.21	-1.3
1,297,904	+		MPMX19_01248	0.50	-0.9
1,297,904	+		MPMX19_01248	0.50	-1.7
1,297,904	+		MPMX19_01248	0.50	-1.5
1,297,904	-		MPMX19_01248	0.50	-0.7
1,297,905	-		MPMX19_01248	0.51	-0.9
1,297,905	-		MPMX19_01248	0.51	-1.0
1,297,935	+		MPMX19_01248	0.68	+0.5
1,297,936	-		MPMX19_01248	0.68	-0.1
1,297,936	-		MPMX19_01248	0.68	+0.5
1,297,936	-		MPMX19_01248	0.68	-1.9
1,297,936	-		MPMX19_01248	0.68	-0.5
1,297,936	-		MPMX19_01248	0.68	+0.4
1,297,936	-		MPMX19_01248	0.68	-0.5
1,297,936	-		MPMX19_01248	0.68	-0.0
1,297,988	+				-0.7
1,297,988	+				-0.9
1,297,988	+				-1.4
1,297,988	+				-0.7
1,297,988	+				-0.6
1,297,988	+				+0.9
1,297,988	+				+1.0
1,297,988	+				-1.5
1,297,989	-				+1.5
1,297,989	-				+0.1
1,297,989	-				+0.8
1,297,989	-				-0.5
1,297,989	-				-1.9
1,297,989	-				-0.9
1,297,989	-				-0.8
1,297,989	-				+0.4
1,297,989	-				-0.7
1,297,989	-				+0.5
1,298,064	+				-0.0
1,298,064	+				-0.8
1,298,064	+				-0.2
1,298,064	+				-0.6
1,298,064	+				-1.0
1,298,064	+				-0.5
1,298,064	+				-0.7
1,298,064	+				+0.5
1,298,064	+				+0.2
1,298,064	+				-0.5
1,298,064	+				-0.3
1,298,064	+				-0.3
1,298,065	-				+0.0
1,298,065	-				+0.2
1,298,065	-				-0.8
1,298,065	-				-0.3
1,298,065	-				-0.8
1,298,065	-				-0.2
1,298,065	-				-0.6
1,298,319	+		MPMX19_01249	0.15	-0.3
1,298,495	-		MPMX19_01249	0.26	-0.0
1,298,760	+		MPMX19_01249	0.43	+0.5
1,298,760	+		MPMX19_01249	0.43	+0.5
1,298,761	-		MPMX19_01249	0.43	-1.0
1,298,761	-		MPMX19_01249	0.43	-0.0
1,298,761	-		MPMX19_01249	0.43	+0.5
1,298,761	-		MPMX19_01249	0.43	-0.5
1,298,947	-		MPMX19_01249	0.55	+2.1
1,299,231	+		MPMX19_01249	0.73	-0.8
1,299,232	-		MPMX19_01249	0.73	-0.0
1,299,232	-		MPMX19_01249	0.73	+0.5
1,299,232	-		MPMX19_01249	0.73	+0.8
1,299,676	+				+0.7
1,299,676	+				+0.7
1,299,676	+				+0.2
1,299,730	+				-0.0
1,299,730	+				+0.5
1,299,730	+				-0.0
1,299,730	+				+0.5
1,299,730	+				-0.0
1,299,730	+				-0.0
1,299,730	+				-0.5
1,299,731	-				+0.3
1,299,731	-				-0.7
1,299,731	-				+0.2
1,299,731	-				-0.3
1,299,731	-				-0.5
1,299,731	-				+0.0
1,299,731	-				-0.5
1,299,731	-				-0.3
1,299,731	-				-1.0
1,299,731	-				-0.2
1,299,731	-				-0.1
1,299,731	-				-1.6
1,299,731	-				-0.3
1,299,731	-				+0.2
1,299,731	-				-0.3
1,299,731	-				-0.1
1,299,731	-				-3.0
1,299,731	-				-1.2
1,299,731	-				+0.4
1,299,731	-				+1.0
1,299,731	-				+1.5
1,299,731	-				+0.1
1,299,731	-				-0.6
1,299,731	-				-0.5
1,299,731	-				+0.2
1,299,731	-				-0.2
1,299,731	-				-0.5
1,299,731	-				+0.5
1,299,731	-				-1.1
1,299,731	-				-2.7
1,299,731	-				-0.6
1,299,731	-				-0.6
1,299,731	-				+0.3
1,299,731	-				-0.1
1,299,731	-				-0.7
1,299,732	+				-0.0
1,299,732	+				-1.3
1,299,732	+				-1.5
1,299,732	+				+1.5
1,299,732	+				+1.5
1,299,732	+				-1.0
1,299,733	-				-1.0
1,299,733	-				-0.7
1,299,733	-				-0.5
1,299,733	-				+0.8
1,299,733	-				+0.1
1,299,733	-				-0.8
1,299,733	-				-2.4
1,299,733	-				-0.0
1,299,733	-				-0.2
1,299,733	-				+0.1
1,299,733	-				-0.8
1,299,733	-				+0.4
1,299,733	-				+1.4
1,299,733	-				-0.7
1,299,733	-				+0.8
1,299,733	-				+0.5
1,299,733	-				+0.2
1,299,733	-				-0.8
1,299,733	-				-1.3
1,299,733	-				+0.3
1,299,733	-				-1.0
1,299,733	-				+0.1
1,299,733	-				-0.4
1,299,733	-				+0.7
1,299,733	-				+0.2
1,299,733	-				-0.2
1,299,733	-				-0.8
1,299,733	-				-1.3
1,299,733	-				-0.7
1,299,733	-				+1.8
1,299,733	-				-1.3
1,299,733	-				+0.9
1,299,733	-				+0.4
1,299,750	+				-0.8
1,299,751	-				+0.3
1,299,751	-				+2.0
1,299,751	-				+1.5
1,299,751	-				+0.5