Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01184

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,226,712	+		MPMX19_01183	0.85	+0.7
1,226,712	+		MPMX19_01183	0.85	-0.8
1,226,712	+		MPMX19_01183	0.85	-1.0
1,226,712	+		MPMX19_01183	0.85	-0.2
1,226,713	-		MPMX19_01183	0.85	-0.9
1,226,713	-		MPMX19_01183	0.85	-0.2
1,226,713	-		MPMX19_01183	0.85	-1.4
1,226,713	-		MPMX19_01183	0.85	-0.6
1,226,818	+		MPMX19_01183	0.89	-0.5
1,226,819	-		MPMX19_01183	0.89	-1.0
1,227,009	+				-0.8
1,227,009	+				-0.4
1,227,009	+				-1.4
1,227,009	+				-0.5
1,227,010	-				-1.3
1,227,010	-				+0.1
1,227,010	-				-1.3
1,227,010	-				-0.0
1,227,010	-				-0.0
1,227,010	-				+0.1
1,227,057	+				-0.4
1,227,057	+				-1.5
1,227,057	+				-0.7
1,227,057	+				-0.3
1,227,057	+				-1.0
1,227,057	+				+1.8
1,227,058	-				-0.9
1,227,058	-				+0.1
1,227,058	-				-0.8
1,227,058	-				-1.3
1,227,058	-				-0.6
1,227,058	-				-1.9
1,227,097	+				-0.7
1,227,097	+				-0.5
1,227,097	+				+2.4
1,227,097	+				+1.1
1,227,097	+				+0.5
1,227,097	+				-1.8
1,227,097	+				-1.5
1,227,097	+				+0.3
1,227,097	+				+0.5
1,227,097	+				+0.2
1,227,097	+				+1.1
1,227,097	+				-0.6
1,227,097	+				-1.5
1,227,097	+				-1.8
1,227,097	+				-1.2
1,227,098	-				+0.9
1,227,098	-				+0.4
1,227,098	-				-0.0
1,227,098	-				-0.8
1,227,098	-				-0.9
1,227,098	-				-1.2
1,227,098	-				-1.6
1,227,098	-				-0.0
1,227,098	-				-0.3
1,227,098	-				+0.8
1,227,098	-				-1.9
1,227,098	-				-0.5
1,227,098	-				-0.5
1,227,098	-				-0.1
1,227,098	-				-0.0
1,227,098	-				+0.8
1,227,098	-				+0.5
1,227,098	-				+0.5
1,227,266	+				+0.2
1,227,266	+				-0.0
1,227,266	+				-0.8
1,227,266	+				+0.4
1,227,266	+				-1.1
1,227,266	+				-0.9
1,227,266	+				-0.3
1,227,266	+				+1.4
1,227,267	-				-0.3
1,227,267	-				+0.5
1,227,267	-				+0.2
1,227,267	-				-2.0
1,227,267	-				-1.5
1,227,267	-				+1.1
1,227,267	-				-0.5
1,227,267	-				-0.8
1,227,267	-				-2.1
1,227,267	-				-1.1
1,227,299	+				-0.0
1,227,300	-				+0.7
1,227,300	-				+1.1
1,227,300	-				+1.5
1,227,312	+				-0.5
1,227,312	+				-0.8
1,227,312	+				-0.5
1,227,312	+				+0.0
1,227,312	+				+0.1
1,227,312	+				+0.4
1,227,312	+				+0.1
1,227,312	+				-1.8
1,227,312	+				-0.3
1,227,313	-				+0.5
1,227,313	-				+0.7
1,227,313	-				-1.5
1,227,313	-				+0.7
1,227,313	-				+0.5
1,227,313	-				+0.3
1,227,313	-				-0.4
1,227,313	-				-0.9
1,227,313	-				-0.6
1,227,313	-				+0.3
1,227,313	-				+0.3
1,227,313	-				+0.7
1,227,627	+		MPMX19_01184	0.20	-0.5
1,227,627	+		MPMX19_01184	0.20	+0.2
1,227,627	+		MPMX19_01184	0.20	-1.1
1,227,627	+		MPMX19_01184	0.20	+0.0
1,227,627	+		MPMX19_01184	0.20	-0.7
1,227,627	+		MPMX19_01184	0.20	+1.5
1,227,627	+		MPMX19_01184	0.20	-0.4
1,227,627	+		MPMX19_01184	0.20	-0.2
1,227,627	+		MPMX19_01184	0.20	-0.8
1,227,627	+		MPMX19_01184	0.20	-0.4
1,227,627	+		MPMX19_01184	0.20	-0.6
1,227,627	+		MPMX19_01184	0.20	-0.7
1,227,627	+		MPMX19_01184	0.20	-0.9
1,227,627	+		MPMX19_01184	0.20	-1.5
1,227,628	-		MPMX19_01184	0.20	+0.1
1,227,628	-		MPMX19_01184	0.20	-0.5
1,227,628	-		MPMX19_01184	0.20	+0.1
1,227,628	-		MPMX19_01184	0.20	-2.9
1,227,628	-		MPMX19_01184	0.20	-2.3
1,227,628	-		MPMX19_01184	0.20	-1.0
1,227,628	-		MPMX19_01184	0.20	+0.2
1,227,628	-		MPMX19_01184	0.20	+0.4
1,227,628	-		MPMX19_01184	0.20	-0.8
1,227,831	+		MPMX19_01184	0.42	-1.5
1,227,939	+		MPMX19_01184	0.55	-0.9
1,227,939	+		MPMX19_01184	0.55	+0.8
1,227,939	+		MPMX19_01184	0.55	-0.5
1,227,939	+		MPMX19_01184	0.55	-0.0
1,227,939	+		MPMX19_01184	0.55	-1.0
1,227,939	+		MPMX19_01184	0.55	-0.8
1,227,939	+		MPMX19_01184	0.55	+1.2
1,227,940	-		MPMX19_01184	0.55	-0.2
1,227,940	-		MPMX19_01184	0.55	-0.5
1,227,940	-		MPMX19_01184	0.55	-0.3
1,227,940	-		MPMX19_01184	0.55	-0.3
1,227,940	-		MPMX19_01184	0.55	-1.0
1,227,940	-		MPMX19_01184	0.55	-1.6
1,228,191	+		MPMX19_01184	0.83	-0.5
1,228,191	+		MPMX19_01184	0.83	+0.0
1,228,191	+		MPMX19_01184	0.83	-0.2
1,228,191	+		MPMX19_01184	0.83	-2.7
1,228,191	+		MPMX19_01184	0.83	+0.3
1,228,191	+		MPMX19_01184	0.83	-1.2
1,228,191	+		MPMX19_01184	0.83	+0.6
1,228,191	+		MPMX19_01184	0.83	+0.3
1,228,191	+		MPMX19_01184	0.83	-3.3
1,228,191	+		MPMX19_01184	0.83	-0.2
1,228,191	+		MPMX19_01184	0.83	+0.4
1,228,191	+		MPMX19_01184	0.83	+0.9
1,228,191	+		MPMX19_01184	0.83	-1.0
1,228,191	+		MPMX19_01184	0.83	-0.1
1,228,191	+		MPMX19_01184	0.83	-2.4
1,228,191	+		MPMX19_01184	0.83	-1.4
1,228,191	+		MPMX19_01184	0.83	-0.8
1,228,191	+		MPMX19_01184	0.83	+0.0
1,228,191	+		MPMX19_01184	0.83	-1.0
1,228,191	+		MPMX19_01184	0.83	-0.9
1,228,191	+		MPMX19_01184	0.83	+0.1
1,228,192	-		MPMX19_01184	0.83	-0.7
1,228,192	-		MPMX19_01184	0.83	-0.1
1,228,192	-		MPMX19_01184	0.83	-0.3
1,228,192	-		MPMX19_01184	0.83	-0.0
1,228,192	-		MPMX19_01184	0.83	+0.4
1,228,192	-		MPMX19_01184	0.83	-1.2
1,228,192	-		MPMX19_01184	0.83	+0.5
1,228,192	-		MPMX19_01184	0.83	+0.2
1,228,192	-		MPMX19_01184	0.83	-1.5
1,228,192	-		MPMX19_01184	0.83	+0.5
1,228,192	-		MPMX19_01184	0.83	+0.8
1,228,192	-		MPMX19_01184	0.83	+0.3
1,228,192	-		MPMX19_01184	0.83	-0.3
1,228,192	-		MPMX19_01184	0.83	+0.7
1,228,192	-		MPMX19_01184	0.83	+1.0
1,228,192	-		MPMX19_01184	0.83	-0.4
1,228,192	-		MPMX19_01184	0.83	+0.5
1,228,192	-		MPMX19_01184	0.83	-0.3
1,228,192	-		MPMX19_01184	0.83	-1.5
1,228,192	-		MPMX19_01184	0.83	+0.5
1,228,192	-		MPMX19_01184	0.83	-0.3
1,228,212	+		MPMX19_01184	0.85	-2.5
1,228,212	+		MPMX19_01184	0.85	-0.9
1,228,212	+		MPMX19_01184	0.85	-0.5
1,228,212	+		MPMX19_01184	0.85	+1.5
1,228,212	+		MPMX19_01184	0.85	-2.6
1,228,212	+		MPMX19_01184	0.85	+0.8
1,228,212	+		MPMX19_01184	0.85	-0.9
1,228,212	+		MPMX19_01184	0.85	-0.3
1,228,212	+		MPMX19_01184	0.85	-0.1
1,228,212	+		MPMX19_01184	0.85	+0.2
1,228,212	+		MPMX19_01184	0.85	+1.0
1,228,212	+		MPMX19_01184	0.85	-1.6
1,228,212	+		MPMX19_01184	0.85	-0.5
1,228,212	+		MPMX19_01184	0.85	+0.7
1,228,212	+		MPMX19_01184	0.85	+1.1
1,228,212	+		MPMX19_01184	0.85	-0.2
1,228,212	+		MPMX19_01184	0.85	+0.2
1,228,212	+		MPMX19_01184	0.85	+0.2
1,228,212	+		MPMX19_01184	0.85	-1.2
1,228,212	+		MPMX19_01184	0.85	-0.2
1,228,212	+		MPMX19_01184	0.85	-0.2
1,228,212	+		MPMX19_01184	0.85	-1.4
1,228,212	+		MPMX19_01184	0.85	+0.7
1,228,212	+		MPMX19_01184	0.85	-2.2
1,228,212	+		MPMX19_01184	0.85	+0.3
1,228,212	+		MPMX19_01184	0.85	-2.6
1,228,212	+		MPMX19_01184	0.85	-1.8
1,228,212	+		MPMX19_01184	0.85	-0.5
1,228,212	+		MPMX19_01184	0.85	-0.4
1,228,212	+		MPMX19_01184	0.85	-2.1
1,228,212	+		MPMX19_01184	0.85	-0.3
1,228,213	-		MPMX19_01184	0.85	+0.6
1,228,213	-		MPMX19_01184	0.85	+0.6
1,228,213	-		MPMX19_01184	0.85	-1.0
1,228,213	-		MPMX19_01184	0.85	-0.8
1,228,213	-		MPMX19_01184	0.85	-0.3
1,228,213	-		MPMX19_01184	0.85	-0.7
1,228,213	-		MPMX19_01184	0.85	+0.0
1,228,213	-		MPMX19_01184	0.85	-0.3
1,228,213	-		MPMX19_01184	0.85	-1.3
1,228,213	-		MPMX19_01184	0.85	+0.5
1,228,213	-		MPMX19_01184	0.85	+0.5
1,228,213	-		MPMX19_01184	0.85	+0.8
1,228,213	-		MPMX19_01184	0.85	-0.3
1,228,213	-		MPMX19_01184	0.85	-1.0
1,228,213	-		MPMX19_01184	0.85	-1.3
1,228,213	-		MPMX19_01184	0.85	-0.9
1,228,213	-		MPMX19_01184	0.85	+0.3
1,228,213	-		MPMX19_01184	0.85	+0.5
1,228,213	-		MPMX19_01184	0.85	+0.4
1,228,213	-		MPMX19_01184	0.85	-2.2
1,228,213	-		MPMX19_01184	0.85	-0.8
1,228,213	-		MPMX19_01184	0.85	-1.5
1,228,213	-		MPMX19_01184	0.85	-0.0
1,228,213	-		MPMX19_01184	0.85	-1.8
1,228,213	-		MPMX19_01184	0.85	-0.3
1,228,213	-		MPMX19_01184	0.85	-1.0
1,228,213	-		MPMX19_01184	0.85	-0.2
1,228,213	-		MPMX19_01184	0.85	-0.5
1,228,213	-		MPMX19_01184	0.85	-0.6
1,228,213	-		MPMX19_01184	0.85	-1.4
1,228,213	-		MPMX19_01184	0.85	-0.0
1,228,213	-		MPMX19_01184	0.85	-0.2
1,228,213	-		MPMX19_01184	0.85	+0.3
1,228,213	-		MPMX19_01184	0.85	+1.5
1,228,213	-		MPMX19_01184	0.85	-1.2
1,228,216	+		MPMX19_01184	0.85	-0.2
1,228,216	+		MPMX19_01184	0.85	-0.6
1,228,216	+		MPMX19_01184	0.85	-2.0
1,228,216	+		MPMX19_01184	0.85	-0.3
1,228,216	+		MPMX19_01184	0.85	+0.4
1,228,216	+		MPMX19_01184	0.85	+0.4
1,228,216	+		MPMX19_01184	0.85	+0.3
1,228,216	+		MPMX19_01184	0.85	+0.4
1,228,216	+		MPMX19_01184	0.85	+0.8
1,228,216	+		MPMX19_01184	0.85	-0.6
1,228,216	+		MPMX19_01184	0.85	-0.2
1,228,216	+		MPMX19_01184	0.85	-0.6
1,228,216	+		MPMX19_01184	0.85	+0.4
1,228,216	+		MPMX19_01184	0.85	-0.2
1,228,216	+		MPMX19_01184	0.85	-1.5
1,228,216	+		MPMX19_01184	0.85	-0.1
1,228,216	+		MPMX19_01184	0.85	-0.7
1,228,216	+		MPMX19_01184	0.85	-0.9
1,228,216	+		MPMX19_01184	0.85	+0.2
1,228,216	+		MPMX19_01184	0.85	-0.6
1,228,216	+		MPMX19_01184	0.85	-0.3
1,228,217	-		MPMX19_01184	0.86	+1.5
1,228,217	-		MPMX19_01184	0.86	-0.3
1,228,217	-		MPMX19_01184	0.86	-1.7
1,228,217	-		MPMX19_01184	0.86	-2.4
1,228,217	-		MPMX19_01184	0.86	+0.4
1,228,217	-		MPMX19_01184	0.86	-1.4
1,228,217	-		MPMX19_01184	0.86	+1.0
1,228,217	-		MPMX19_01184	0.86	+0.1
1,228,217	-		MPMX19_01184	0.86	-0.2
1,228,217	-		MPMX19_01184	0.86	+0.4
1,228,217	-		MPMX19_01184	0.86	+1.5
1,228,217	-		MPMX19_01184	0.86	+1.5
1,228,217	-		MPMX19_01184	0.86	-0.8
1,228,217	-		MPMX19_01184	0.86	-0.5
1,228,217	-		MPMX19_01184	0.86	-0.0
1,228,217	-		MPMX19_01184	0.86	-0.5
1,228,217	-		MPMX19_01184	0.86	-1.0
1,228,217	-		MPMX19_01184	0.86	+0.2
1,228,217	-		MPMX19_01184	0.86	+0.5
1,228,217	-		MPMX19_01184	0.86	-0.9
1,228,217	-		MPMX19_01184	0.86	-0.5
1,228,217	-		MPMX19_01184	0.86	-1.3
1,228,217	-		MPMX19_01184	0.86	-2.5
1,228,217	-		MPMX19_01184	0.86	-0.8
1,228,217	-		MPMX19_01184	0.86	+0.1
1,228,217	-		MPMX19_01184	0.86	-1.0
1,228,217	-		MPMX19_01184	0.86	-1.0
1,228,217	-		MPMX19_01184	0.86	-0.6
1,228,217	-		MPMX19_01184	0.86	-0.8
1,228,217	-		MPMX19_01184	0.86	+0.2
1,228,217	-		MPMX19_01184	0.86	-0.9
1,228,217	-		MPMX19_01184	0.86	+1.1
1,228,217	-		MPMX19_01184	0.86	-1.0
1,228,428	+				-1.9
1,228,428	+				-1.2
1,228,428	+				+0.7
1,228,428	+				-0.5
1,228,429	-				-0.5
1,228,429	-				-1.0
1,228,429	-				-1.0
1,228,429	-				+0.1
1,228,429	-				-0.5
1,228,429	-				-0.4
1,228,429	-				-0.8
1,228,446	+				-0.0
1,228,701	+		MPMX19_01185	0.30	-1.2
1,228,701	+		MPMX19_01185	0.30	-0.5
1,228,701	+		MPMX19_01185	0.30	-0.6
1,228,701	+		MPMX19_01185	0.30	-1.9
1,228,701	+		MPMX19_01185	0.30	-1.9
1,228,701	+		MPMX19_01185	0.30	-1.0
1,228,701	+		MPMX19_01185	0.30	+0.2
1,228,702	-		MPMX19_01185	0.30	-0.5
1,228,702	-		MPMX19_01185	0.30	-0.0
1,228,702	-		MPMX19_01185	0.30	-1.5
1,228,702	-		MPMX19_01185	0.30	+0.8
1,228,702	-		MPMX19_01185	0.30	-0.7
1,228,702	-		MPMX19_01185	0.30	+0.8
1,228,702	-		MPMX19_01185	0.30	+1.0
1,228,702	-		MPMX19_01185	0.30	+0.1
1,228,702	-		MPMX19_01185	0.30	-1.2
1,228,804	+		MPMX19_01185	0.42	-0.0
1,228,804	+		MPMX19_01185	0.42	+0.4
1,228,805	-		MPMX19_01185	0.42	-0.7
1,228,805	-		MPMX19_01185	0.42	+0.1
1,228,805	-		MPMX19_01185	0.42	-1.7
1,228,805	-		MPMX19_01185	0.42	-1.4
1,228,988	+		MPMX19_01185	0.63	-0.8