Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01138

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,170,931	+		MPMX19_01137	0.30	-2.8
1,170,931	+		MPMX19_01137	0.30	+0.8
1,170,931	+		MPMX19_01137	0.30	-0.3
1,170,931	+		MPMX19_01137	0.30	-0.8
1,170,931	+		MPMX19_01137	0.30	+1.9
1,170,931	+		MPMX19_01137	0.30	-0.8
1,170,931	+		MPMX19_01137	0.30	-0.8
1,170,932	-		MPMX19_01137	0.30	-0.3
1,170,932	-		MPMX19_01137	0.30	+0.1
1,170,932	-		MPMX19_01137	0.30	+0.1
1,170,944	+		MPMX19_01137	0.31	-0.6
1,170,945	-		MPMX19_01137	0.32	-0.0
1,170,945	-		MPMX19_01137	0.32	-1.2
1,170,945	-		MPMX19_01137	0.32	+0.2
1,170,958	+		MPMX19_01137	0.33	-0.7
1,170,958	+		MPMX19_01137	0.33	+0.1
1,171,039	+		MPMX19_01137	0.40	+0.0
1,171,054	+		MPMX19_01137	0.41	+0.7
1,171,054	+		MPMX19_01137	0.41	+0.1
1,171,054	+		MPMX19_01137	0.41	+0.2
1,171,055	-		MPMX19_01137	0.41	-0.0
1,171,055	-		MPMX19_01137	0.41	-0.5
1,171,055	-		MPMX19_01137	0.41	-1.8
1,171,064	+		MPMX19_01137	0.42	+1.0
1,171,064	+		MPMX19_01137	0.42	+0.1
1,171,064	+		MPMX19_01137	0.42	+0.2
1,171,064	+		MPMX19_01137	0.42	-1.2
1,171,064	+		MPMX19_01137	0.42	-0.6
1,171,065	-		MPMX19_01137	0.42	-0.8
1,171,065	-		MPMX19_01137	0.42	+0.1
1,171,065	-		MPMX19_01137	0.42	+1.5
1,171,065	-		MPMX19_01137	0.42	-0.4
1,171,073	-		MPMX19_01137	0.42	-1.9
1,171,073	-		MPMX19_01137	0.42	-1.4
1,171,085	+		MPMX19_01137	0.43	-1.9
1,171,086	-		MPMX19_01137	0.43	-0.1
1,171,086	-		MPMX19_01137	0.43	-0.3
1,171,100	+		MPMX19_01137	0.45	+1.2
1,171,100	+		MPMX19_01137	0.45	-0.3
1,171,100	+		MPMX19_01137	0.45	+0.6
1,171,100	+		MPMX19_01137	0.45	+1.0
1,171,100	+		MPMX19_01137	0.45	-0.5
1,171,100	+		MPMX19_01137	0.45	-0.7
1,171,100	+		MPMX19_01137	0.45	-0.6
1,171,101	-		MPMX19_01137	0.45	-0.5
1,171,101	-		MPMX19_01137	0.45	+0.5
1,171,101	-		MPMX19_01137	0.45	+0.1
1,171,101	-		MPMX19_01137	0.45	+0.2
1,171,101	-		MPMX19_01137	0.45	-1.0
1,171,101	-		MPMX19_01137	0.45	-0.1
1,171,106	+		MPMX19_01137	0.45	+0.7
1,171,106	+		MPMX19_01137	0.45	-1.8
1,171,106	+		MPMX19_01137	0.45	-1.2
1,171,107	-		MPMX19_01137	0.45	-0.6
1,171,145	+		MPMX19_01137	0.48	-2.5
1,171,145	+		MPMX19_01137	0.48	+0.4
1,171,145	+		MPMX19_01137	0.48	-2.5
1,171,145	+		MPMX19_01137	0.48	-0.3
1,171,145	+		MPMX19_01137	0.48	-1.3
1,171,145	+		MPMX19_01137	0.48	+0.3
1,171,145	+		MPMX19_01137	0.48	-1.2
1,171,145	+		MPMX19_01137	0.48	-1.0
1,171,146	-		MPMX19_01137	0.49	+0.2
1,171,146	-		MPMX19_01137	0.49	-0.8
1,171,146	-		MPMX19_01137	0.49	+0.5
1,171,146	-		MPMX19_01137	0.49	+0.1
1,171,146	-		MPMX19_01137	0.49	+2.5
1,171,146	-		MPMX19_01137	0.49	-0.0
1,171,165	+		MPMX19_01137	0.50	-0.3
1,171,165	+		MPMX19_01137	0.50	-0.5
1,171,166	-		MPMX19_01137	0.50	-0.8
1,171,166	-		MPMX19_01137	0.50	-1.3
1,171,166	-		MPMX19_01137	0.50	-0.3
1,171,208	+		MPMX19_01137	0.54	-0.9
1,171,208	+		MPMX19_01137	0.54	-0.2
1,171,208	+		MPMX19_01137	0.54	-0.0
1,171,209	-		MPMX19_01137	0.54	+0.2
1,171,209	-		MPMX19_01137	0.54	-1.0
1,171,209	-		MPMX19_01137	0.54	-1.6
1,171,209	-		MPMX19_01137	0.54	+0.5
1,171,209	-		MPMX19_01137	0.54	-1.0
1,171,209	-		MPMX19_01137	0.54	-0.5
1,171,274	+		MPMX19_01137	0.59	-0.6
1,171,275	-		MPMX19_01137	0.59	+0.3
1,171,275	-		MPMX19_01137	0.59	+0.8
1,171,275	-		MPMX19_01137	0.59	-1.0
1,171,275	-		MPMX19_01137	0.59	-0.3
1,171,275	-		MPMX19_01137	0.59	-1.5
1,171,275	-		MPMX19_01137	0.59	-0.9
1,171,328	+		MPMX19_01137	0.64	+0.2
1,171,328	+		MPMX19_01137	0.64	+0.7
1,171,328	+		MPMX19_01137	0.64	-0.4
1,171,328	+		MPMX19_01137	0.64	+0.4
1,171,328	+		MPMX19_01137	0.64	-0.0
1,171,328	+		MPMX19_01137	0.64	-0.3
1,171,328	+		MPMX19_01137	0.64	-2.8
1,171,328	+		MPMX19_01137	0.64	-1.3
1,171,329	-		MPMX19_01137	0.64	+0.2
1,171,329	-		MPMX19_01137	0.64	-2.8
1,171,329	-		MPMX19_01137	0.64	-1.1
1,171,329	-		MPMX19_01137	0.64	-1.5
1,171,394	+		MPMX19_01137	0.70	-0.2
1,171,394	+		MPMX19_01137	0.70	-0.2
1,171,394	+		MPMX19_01137	0.70	-2.6
1,171,394	+		MPMX19_01137	0.70	-1.2
1,171,394	+		MPMX19_01137	0.70	-1.0
1,171,394	+		MPMX19_01137	0.70	+0.1
1,171,394	+		MPMX19_01137	0.70	-1.6
1,171,394	+		MPMX19_01137	0.70	+0.1
1,171,394	+		MPMX19_01137	0.70	-1.9
1,171,394	+		MPMX19_01137	0.70	-1.5
1,171,394	+		MPMX19_01137	0.70	-1.7
1,171,394	+		MPMX19_01137	0.70	-1.5
1,171,394	+		MPMX19_01137	0.70	-0.5
1,171,394	+		MPMX19_01137	0.70	-0.7
1,171,394	+		MPMX19_01137	0.70	-0.3
1,171,394	+		MPMX19_01137	0.70	-1.0
1,171,394	+		MPMX19_01137	0.70	-0.5
1,171,394	+		MPMX19_01137	0.70	-0.5
1,171,394	+		MPMX19_01137	0.70	-0.3
1,171,394	+		MPMX19_01137	0.70	-0.7
1,171,394	+		MPMX19_01137	0.70	-0.2
1,171,394	+		MPMX19_01137	0.70	+1.3
1,171,394	+		MPMX19_01137	0.70	-0.6
1,171,394	+		MPMX19_01137	0.70	+1.1
1,171,394	+		MPMX19_01137	0.70	-0.0
1,171,394	+		MPMX19_01137	0.70	-1.0
1,171,394	+		MPMX19_01137	0.70	-0.7
1,171,394	+		MPMX19_01137	0.70	-0.8
1,171,394	+		MPMX19_01137	0.70	-1.0
1,171,395	-		MPMX19_01137	0.70	+0.5
1,171,395	-		MPMX19_01137	0.70	-1.3
1,171,395	-		MPMX19_01137	0.70	+0.2
1,171,395	-		MPMX19_01137	0.70	-0.5
1,171,395	-		MPMX19_01137	0.70	-0.3
1,171,395	-		MPMX19_01137	0.70	-0.9
1,171,395	-		MPMX19_01137	0.70	+0.5
1,171,395	-		MPMX19_01137	0.70	-0.9
1,171,395	-		MPMX19_01137	0.70	+1.0
1,171,395	-		MPMX19_01137	0.70	-1.5
1,171,395	-		MPMX19_01137	0.70	+0.2
1,171,395	-		MPMX19_01137	0.70	-1.6
1,171,395	-		MPMX19_01137	0.70	-0.0
1,171,395	-		MPMX19_01137	0.70	-0.0
1,171,395	-		MPMX19_01137	0.70	-1.5
1,171,395	-		MPMX19_01137	0.70	-0.7
1,171,395	-		MPMX19_01137	0.70	+0.2
1,171,395	-		MPMX19_01137	0.70	-0.3
1,171,395	-		MPMX19_01137	0.70	+0.3
1,171,395	-		MPMX19_01137	0.70	+1.8
1,171,395	-		MPMX19_01137	0.70	-0.3
1,171,395	-		MPMX19_01137	0.70	-0.3
1,171,395	-		MPMX19_01137	0.70	+0.8
1,171,395	-		MPMX19_01137	0.70	-1.3
1,171,395	-		MPMX19_01137	0.70	-0.9
1,171,395	-		MPMX19_01137	0.70	-0.3
1,171,395	-		MPMX19_01137	0.70	-0.0
1,171,395	-		MPMX19_01137	0.70	+0.0
1,171,395	-		MPMX19_01137	0.70	-1.4
1,171,395	-		MPMX19_01137	0.70	-0.9
1,171,395	-		MPMX19_01137	0.70	-0.5
1,171,395	-		MPMX19_01137	0.70	-1.3
1,171,395	-		MPMX19_01137	0.70	+0.7
1,171,395	-		MPMX19_01137	0.70	+0.2
1,171,395	-		MPMX19_01137	0.70	-1.6
1,171,395	-		MPMX19_01137	0.70	+0.6
1,171,395	-		MPMX19_01137	0.70	-0.2
1,171,396	+		MPMX19_01137	0.70	-1.0
1,171,396	+		MPMX19_01137	0.70	+0.3
1,171,396	+		MPMX19_01137	0.70	-2.0
1,171,396	+		MPMX19_01137	0.70	-0.1
1,171,396	+		MPMX19_01137	0.70	+1.0
1,171,396	+		MPMX19_01137	0.70	+0.8
1,171,396	+		MPMX19_01137	0.70	+0.1
1,171,396	+		MPMX19_01137	0.70	-0.6
1,171,396	+		MPMX19_01137	0.70	+0.3
1,171,396	+		MPMX19_01137	0.70	-0.5
1,171,396	+		MPMX19_01137	0.70	-0.4
1,171,396	+		MPMX19_01137	0.70	+1.3
1,171,396	+		MPMX19_01137	0.70	+0.4
1,171,396	+		MPMX19_01137	0.70	+1.2
1,171,396	+		MPMX19_01137	0.70	+0.6
1,171,396	+		MPMX19_01137	0.70	-0.6
1,171,397	-		MPMX19_01137	0.70	+1.5
1,171,397	-		MPMX19_01137	0.70	-0.6
1,171,397	-		MPMX19_01137	0.70	+0.5
1,171,397	-		MPMX19_01137	0.70	+0.8
1,171,397	-		MPMX19_01137	0.70	-1.6
1,171,397	-		MPMX19_01137	0.70	+1.8
1,171,397	-		MPMX19_01137	0.70	-1.0
1,171,397	-		MPMX19_01137	0.70	+0.3
1,171,397	-		MPMX19_01137	0.70	-1.0
1,171,397	-		MPMX19_01137	0.70	+1.8
1,171,397	-		MPMX19_01137	0.70	+0.0
1,171,397	-		MPMX19_01137	0.70	-1.0
1,171,397	-		MPMX19_01137	0.70	-0.8
1,171,397	-		MPMX19_01137	0.70	+1.0
1,171,448	+		MPMX19_01137	0.74	-1.3
1,171,448	+		MPMX19_01137	0.74	-0.1
1,171,448	+		MPMX19_01137	0.74	+0.3
1,171,448	+		MPMX19_01137	0.74	-0.3
1,171,448	+		MPMX19_01137	0.74	-0.6
1,171,448	+		MPMX19_01137	0.74	+0.1
1,171,448	+		MPMX19_01137	0.74	-1.0
1,171,448	+		MPMX19_01137	0.74	-0.8
1,171,448	+		MPMX19_01137	0.74	+1.9
1,171,448	+		MPMX19_01137	0.74	-0.3
1,171,448	+		MPMX19_01137	0.74	-1.2
1,171,448	+		MPMX19_01137	0.74	-0.2
1,171,448	+		MPMX19_01137	0.74	-1.9
1,171,448	+		MPMX19_01137	0.74	-1.6
1,171,448	+		MPMX19_01137	0.74	-0.3
1,171,448	+		MPMX19_01137	0.74	-0.5
1,171,448	+		MPMX19_01137	0.74	+0.8
1,171,448	+		MPMX19_01137	0.74	-2.2
1,171,449	-		MPMX19_01137	0.74	-0.8
1,171,449	-		MPMX19_01137	0.74	-0.3
1,171,449	-		MPMX19_01137	0.74	+0.7
1,171,449	-		MPMX19_01137	0.74	+0.7
1,171,449	-		MPMX19_01137	0.74	+0.1
1,171,449	-		MPMX19_01137	0.74	-0.5
1,171,449	-		MPMX19_01137	0.74	+0.3
1,171,449	-		MPMX19_01137	0.74	-0.8
1,171,449	-		MPMX19_01137	0.74	+2.3
1,171,449	-		MPMX19_01137	0.74	-0.2
1,171,471	+		MPMX19_01137	0.76	-0.6
1,171,471	+		MPMX19_01137	0.76	+1.9
1,171,471	+		MPMX19_01137	0.76	-0.3
1,171,472	-		MPMX19_01137	0.76	-2.4
1,171,472	-		MPMX19_01137	0.76	+0.3
1,171,472	-		MPMX19_01137	0.76	+1.1
1,171,472	-		MPMX19_01137	0.76	+0.0
1,171,472	-		MPMX19_01137	0.76	-0.0
1,171,472	-		MPMX19_01137	0.76	+0.3
1,171,472	-		MPMX19_01137	0.76	-1.8
1,171,472	-		MPMX19_01137	0.76	-1.0
1,171,492	+		MPMX19_01137	0.78	-1.4
1,171,493	-		MPMX19_01137	0.78	-1.9
1,171,493	-		MPMX19_01137	0.78	+0.5
1,171,493	-		MPMX19_01137	0.78	+1.0
1,171,493	-		MPMX19_01137	0.78	-0.0
1,171,514	+		MPMX19_01137	0.80	+0.3
1,171,514	+		MPMX19_01137	0.80	-1.2
1,171,514	+		MPMX19_01137	0.80	-2.2
1,171,514	+		MPMX19_01137	0.80	+0.3
1,171,514	+		MPMX19_01137	0.80	+0.1
1,171,514	+		MPMX19_01137	0.80	-0.1
1,171,514	+		MPMX19_01137	0.80	-0.8
1,171,514	+		MPMX19_01137	0.80	-0.4
1,171,514	+		MPMX19_01137	0.80	+0.3
1,171,514	+		MPMX19_01137	0.80	-0.0
1,171,514	+		MPMX19_01137	0.80	-0.5
1,171,514	+		MPMX19_01137	0.80	-0.1
1,171,514	+		MPMX19_01137	0.80	-0.1
1,171,515	-		MPMX19_01137	0.80	-0.3
1,171,515	-		MPMX19_01137	0.80	-1.5
1,171,515	-		MPMX19_01137	0.80	-1.8
1,171,515	-		MPMX19_01137	0.80	-1.0
1,171,515	-		MPMX19_01137	0.80	-0.3
1,171,515	-		MPMX19_01137	0.80	-1.7
1,171,515	-		MPMX19_01137	0.80	-0.8
1,171,568	+		MPMX19_01137	0.84	-0.0
1,171,568	+		MPMX19_01137	0.84	-0.3
1,171,568	+		MPMX19_01137	0.84	-1.7
1,171,569	-		MPMX19_01137	0.84	+1.1
1,171,569	-		MPMX19_01137	0.84	-0.0
1,171,569	-		MPMX19_01137	0.84	+0.0
1,171,601	+		MPMX19_01137	0.87	-0.5
1,171,601	+		MPMX19_01137	0.87	-0.6
1,171,601	+		MPMX19_01137	0.87	+0.2
1,171,601	+		MPMX19_01137	0.87	-0.0
1,171,601	+		MPMX19_01137	0.87	-1.3
1,171,601	+		MPMX19_01137	0.87	+1.5
1,171,601	+		MPMX19_01137	0.87	+0.7
1,171,601	+		MPMX19_01137	0.87	-0.3
1,171,601	+		MPMX19_01137	0.87	-0.2
1,171,601	+		MPMX19_01137	0.87	-0.2
1,171,601	+		MPMX19_01137	0.87	+1.1
1,171,601	+		MPMX19_01137	0.87	+0.5
1,171,602	-		MPMX19_01137	0.87	-0.6
1,171,602	-		MPMX19_01137	0.87	-0.7
1,171,602	-		MPMX19_01137	0.87	+1.1
1,171,602	-		MPMX19_01137	0.87	-1.3
1,171,602	-		MPMX19_01137	0.87	+1.3
1,171,602	-		MPMX19_01137	0.87	-0.0
1,171,602	-		MPMX19_01137	0.87	-1.3
1,171,602	-		MPMX19_01137	0.87	+1.2
1,171,602	-		MPMX19_01137	0.87	-0.3
1,171,602	-		MPMX19_01137	0.87	+0.5
1,171,602	-		MPMX19_01137	0.87	+0.1
1,171,602	-		MPMX19_01137	0.87	-0.6
1,171,602	-		MPMX19_01137	0.87	-1.8
1,171,602	-		MPMX19_01137	0.87	-1.0
1,171,602	-		MPMX19_01137	0.87	+0.5
1,171,634	+		MPMX19_01137	0.90	-0.9
1,171,634	+		MPMX19_01137	0.90	-1.3
1,171,634	+		MPMX19_01137	0.90	+0.3
1,171,634	+		MPMX19_01137	0.90	-0.7
1,171,634	+		MPMX19_01137	0.90	-0.4
1,171,634	+		MPMX19_01137	0.90	+1.0
1,171,634	+		MPMX19_01137	0.90	-1.0
1,171,634	+		MPMX19_01137	0.90	+1.4
1,171,634	+		MPMX19_01137	0.90	-0.3
1,171,634	+		MPMX19_01137	0.90	-1.1
1,171,634	+		MPMX19_01137	0.90	-0.4
1,171,634	+		MPMX19_01137	0.90	-1.2
1,171,634	+		MPMX19_01137	0.90	-1.4
1,171,634	+		MPMX19_01137	0.90	-0.0
1,171,634	+		MPMX19_01137	0.90	-0.0
1,171,634	+		MPMX19_01137	0.90	-0.5
1,171,634	+		MPMX19_01137	0.90	-0.5
1,171,634	+		MPMX19_01137	0.90	-0.2
1,171,635	-				+1.2
1,171,635	-				+0.1
1,171,635	-				+0.1
1,171,635	-				+0.7
1,171,635	-				-0.9
1,171,635	-				-0.6
1,171,635	-				+0.5
1,171,635	-				-0.3
1,171,635	-				-0.4
1,171,635	-				-1.6
1,171,635	-				+0.1
1,171,635	-				-1.9
1,171,635	-				+0.8
1,171,635	-				-1.6
1,171,635	-				+1.0
1,171,635	-				-1.3
1,171,635	-				+0.0
1,171,635	-				+0.5
1,171,635	-				-1.0
1,171,751	+				+1.3
1,171,751	+				+0.0
1,171,752	-				+0.0
1,171,825	+				-2.2
1,171,825	+				-2.2
1,171,852	+				+0.4
1,171,852	+				-0.3
1,171,853	-				-0.5
1,171,853	-				-1.0
1,171,857	+				-0.2
1,171,857	+				+0.2
1,171,858	-				+0.5
1,171,858	-				-0.0
1,172,224	+				+1.5
1,172,224	+				-0.5
1,172,224	+				+1.5
1,172,224	+				+0.9
1,172,224	+				-0.7
1,172,224	+				-1.5
1,172,224	+				-1.5
1,172,224	+				-0.8
1,172,224	+				-1.3
1,172,224	+				+0.7
1,172,224	+				+0.3
1,172,224	+				-0.0
1,172,225	-				+0.3
1,172,225	-				-0.3
1,172,225	-				+0.5
1,172,225	-				+2.0
1,172,225	-				+0.5
1,172,225	-				+0.5
1,172,225	-				+0.2
1,172,225	-				+1.5
1,172,225	-				-0.8
1,172,225	-				+0.5
1,172,225	-				+0.1
1,172,225	-				-1.0
1,172,225	-				-0.0
1,172,225	-				-0.3
1,172,225	-				+0.3
1,172,225	-				+0.7
1,172,226	+				-1.6
1,172,226	+				-0.8
1,172,226	+				-0.6
1,172,226	+				-1.5
1,172,226	+				+3.3
1,172,226	+				-0.2
1,172,226	+				-0.4
1,172,226	+				-0.5
1,172,227	-				-1.0
1,172,227	-				-1.3
1,172,227	-				-0.8
1,172,227	-				-0.0
1,172,227	-				+0.3
1,172,227	-				-0.9
1,172,227	-				-0.2
1,172,469	+		MPMX19_01139	0.16	-0.0
1,172,469	+		MPMX19_01139	0.16	-1.2
1,172,469	+		MPMX19_01139	0.16	+0.2
1,172,469	+		MPMX19_01139	0.16	-0.3
1,172,470	-		MPMX19_01139	0.16	-1.0
1,172,470	-		MPMX19_01139	0.16	-0.6
1,172,470	-		MPMX19_01139	0.16	-0.5
1,172,470	-		MPMX19_01139	0.16	+1.1
1,172,470	-		MPMX19_01139	0.16	-0.6
1,172,470	-		MPMX19_01139	0.16	+0.2