Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01135

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,167,688	+		MPMX19_01134	0.23	-1.0
1,167,688	+		MPMX19_01134	0.23	-0.9
1,167,688	+		MPMX19_01134	0.23	+0.5
1,167,688	+		MPMX19_01134	0.23	+0.1
1,167,688	+		MPMX19_01134	0.23	-0.2
1,167,688	+		MPMX19_01134	0.23	-0.9
1,167,688	+		MPMX19_01134	0.23	+0.3
1,167,688	+		MPMX19_01134	0.23	-0.4
1,167,688	+		MPMX19_01134	0.23	+0.2
1,167,689	-		MPMX19_01134	0.23	-1.5
1,167,689	-		MPMX19_01134	0.23	+0.5
1,167,689	-		MPMX19_01134	0.23	-1.3
1,167,689	-		MPMX19_01134	0.23	-0.0
1,167,689	-		MPMX19_01134	0.23	-0.9
1,167,689	-		MPMX19_01134	0.23	+0.1
1,167,689	-		MPMX19_01134	0.23	-1.0
1,167,689	-		MPMX19_01134	0.23	+1.5
1,167,689	-		MPMX19_01134	0.23	-0.7
1,167,689	-		MPMX19_01134	0.23	-0.9
1,167,689	-		MPMX19_01134	0.23	+0.7
1,167,689	-		MPMX19_01134	0.23	+1.3
1,168,054	+		MPMX19_01134	0.53	+1.2
1,168,055	-		MPMX19_01134	0.53	-1.6
1,168,150	+		MPMX19_01134	0.61	-2.0
1,168,150	+		MPMX19_01134	0.61	+0.1
1,168,150	+		MPMX19_01134	0.61	+0.2
1,168,150	+		MPMX19_01134	0.61	-1.3
1,168,150	+		MPMX19_01134	0.61	+0.2
1,168,150	+		MPMX19_01134	0.61	-0.2
1,168,150	+		MPMX19_01134	0.61	+1.3
1,168,151	-		MPMX19_01134	0.61	+0.3
1,168,151	-		MPMX19_01134	0.61	+0.3
1,168,151	-		MPMX19_01134	0.61	-1.9
1,168,151	-		MPMX19_01134	0.61	+0.7
1,168,151	-		MPMX19_01134	0.61	-1.3
1,168,354	+		MPMX19_01134	0.78	-0.0
1,168,354	+		MPMX19_01134	0.78	-0.4
1,168,354	+		MPMX19_01134	0.78	+0.4
1,168,354	+		MPMX19_01134	0.78	-0.2
1,168,354	+		MPMX19_01134	0.78	-1.5
1,168,354	+		MPMX19_01134	0.78	-0.3
1,168,354	+		MPMX19_01134	0.78	+0.8
1,168,354	+		MPMX19_01134	0.78	+0.6
1,168,354	+		MPMX19_01134	0.78	+1.7
1,168,354	+		MPMX19_01134	0.78	-0.7
1,168,354	+		MPMX19_01134	0.78	+0.4
1,168,354	+		MPMX19_01134	0.78	-1.2
1,168,354	+		MPMX19_01134	0.78	-0.2
1,168,354	+		MPMX19_01134	0.78	-1.8
1,168,354	+		MPMX19_01134	0.78	-0.6
1,168,354	+		MPMX19_01134	0.78	+0.7
1,168,354	+		MPMX19_01134	0.78	-0.5
1,168,354	+		MPMX19_01134	0.78	-0.5
1,168,354	+		MPMX19_01134	0.78	-1.3
1,168,355	-		MPMX19_01134	0.78	-0.5
1,168,355	-		MPMX19_01134	0.78	-0.3
1,168,355	-		MPMX19_01134	0.78	+0.1
1,168,355	-		MPMX19_01134	0.78	-0.2
1,168,355	-		MPMX19_01134	0.78	-0.6
1,168,355	-		MPMX19_01134	0.78	+0.4
1,168,355	-		MPMX19_01134	0.78	-1.1
1,168,355	-		MPMX19_01134	0.78	+0.5
1,168,355	-		MPMX19_01134	0.78	-0.0
1,168,355	-		MPMX19_01134	0.78	-0.2
1,168,355	-		MPMX19_01134	0.78	-0.5
1,168,355	-		MPMX19_01134	0.78	-0.0
1,168,355	-		MPMX19_01134	0.78	+0.2
1,168,355	-		MPMX19_01134	0.78	+0.0
1,168,355	-		MPMX19_01134	0.78	-1.0
1,168,355	-		MPMX19_01134	0.78	+0.5
1,168,355	-		MPMX19_01134	0.78	+1.8
1,168,355	-		MPMX19_01134	0.78	-1.8
1,168,355	-		MPMX19_01134	0.78	+0.7
1,168,355	-		MPMX19_01134	0.78	-1.3
1,168,863	+		MPMX19_01135	0.32	+0.2
1,168,863	+		MPMX19_01135	0.32	-1.1
1,168,863	+		MPMX19_01135	0.32	-0.7
1,168,863	+		MPMX19_01135	0.32	-0.5
1,168,863	+		MPMX19_01135	0.32	-0.5
1,168,864	-		MPMX19_01135	0.32	+0.4
1,168,864	-		MPMX19_01135	0.32	-0.0
1,168,864	-		MPMX19_01135	0.32	-2.1
1,168,865	+		MPMX19_01135	0.32	-0.4
1,168,865	+		MPMX19_01135	0.32	-0.5
1,168,865	+		MPMX19_01135	0.32	-0.3
1,168,865	+		MPMX19_01135	0.32	+0.2
1,168,865	+		MPMX19_01135	0.32	-1.0
1,168,865	+		MPMX19_01135	0.32	-0.6
1,168,865	+		MPMX19_01135	0.32	-1.5
1,168,865	+		MPMX19_01135	0.32	-1.4
1,168,865	+		MPMX19_01135	0.32	-1.9
1,168,865	+		MPMX19_01135	0.32	-0.8
1,168,865	+		MPMX19_01135	0.32	-0.2
1,168,865	+		MPMX19_01135	0.32	-1.2
1,168,865	+		MPMX19_01135	0.32	-0.0
1,168,865	+		MPMX19_01135	0.32	-0.3
1,168,865	+		MPMX19_01135	0.32	+0.9
1,168,865	+		MPMX19_01135	0.32	-3.6
1,168,865	+		MPMX19_01135	0.32	-0.7
1,168,865	+		MPMX19_01135	0.32	-0.5
1,168,865	+		MPMX19_01135	0.32	-0.7
1,168,865	+		MPMX19_01135	0.32	-1.2
1,168,865	+		MPMX19_01135	0.32	-1.0
1,168,865	+		MPMX19_01135	0.32	-0.0
1,168,865	+		MPMX19_01135	0.32	-1.9
1,168,866	-		MPMX19_01135	0.32	-0.5
1,168,866	-		MPMX19_01135	0.32	-0.8
1,168,866	-		MPMX19_01135	0.32	-0.2
1,168,866	-		MPMX19_01135	0.32	-1.6
1,168,866	-		MPMX19_01135	0.32	-1.4
1,168,866	-		MPMX19_01135	0.32	-1.8
1,168,866	-		MPMX19_01135	0.32	-0.6
1,168,866	-		MPMX19_01135	0.32	+0.1
1,168,866	-		MPMX19_01135	0.32	+0.5
1,168,866	-		MPMX19_01135	0.32	-1.6
1,168,866	-		MPMX19_01135	0.32	+0.1
1,168,866	-		MPMX19_01135	0.32	-1.8
1,168,866	-		MPMX19_01135	0.32	-1.0
1,168,866	-		MPMX19_01135	0.32	-0.3
1,168,866	-		MPMX19_01135	0.32	-1.5
1,168,866	-		MPMX19_01135	0.32	-2.9
1,168,944	+		MPMX19_01135	0.42	-0.9
1,168,944	+		MPMX19_01135	0.42	-1.6
1,168,944	+		MPMX19_01135	0.42	+0.3
1,168,944	+		MPMX19_01135	0.42	-1.5
1,168,944	+		MPMX19_01135	0.42	+0.4
1,168,944	+		MPMX19_01135	0.42	-2.0
1,168,944	+		MPMX19_01135	0.42	-1.0
1,168,944	+		MPMX19_01135	0.42	+0.5
1,168,944	+		MPMX19_01135	0.42	-0.3
1,168,945	-		MPMX19_01135	0.42	+0.4
1,168,945	-		MPMX19_01135	0.42	-1.5
1,168,945	-		MPMX19_01135	0.42	-0.4
1,168,945	-		MPMX19_01135	0.42	+0.5
1,168,945	-		MPMX19_01135	0.42	-1.3
1,168,945	-		MPMX19_01135	0.42	-0.1
1,168,945	-		MPMX19_01135	0.42	-0.5
1,168,945	-		MPMX19_01135	0.42	+0.1
1,168,945	-		MPMX19_01135	0.42	-1.3
1,168,945	-		MPMX19_01135	0.42	+0.7
1,169,211	-		MPMX19_01135	0.77	-2.0
1,169,327	+				+2.1
1,169,327	+				-1.6
1,169,327	+				+0.3
1,169,327	+				-1.2
1,169,327	+				+0.4
1,169,327	+				+1.4
1,169,327	+				-1.8
1,169,327	+				+0.1
1,169,327	+				-0.5
1,169,327	+				-1.8
1,169,327	+				+0.0
1,169,327	+				-0.7
1,169,327	+				-1.5
1,169,327	+				+0.4
1,169,327	+				+0.5
1,169,327	+				+1.0
1,169,327	+				+0.5
1,169,327	+				-1.3
1,169,327	+				+1.3
1,169,327	+				-2.2
1,169,327	+				-0.9
1,169,327	+				+0.4
1,169,327	+				+1.0
1,169,327	+				-1.3
1,169,327	+				+0.1
1,169,327	+				-0.8
1,169,327	+				-2.4
1,169,327	+				+1.5
1,169,327	+				-1.0
1,169,327	+				-0.2
1,169,327	+				+0.1
1,169,327	+				-1.0
1,169,327	+				-0.1
1,169,327	+				-0.4
1,169,327	+				-0.7
1,169,327	+				-0.1
1,169,327	+				-1.0
1,169,327	+				-0.6
1,169,327	+				+0.6
1,169,327	+				-0.3
1,169,327	+				+0.2
1,169,327	+				-0.5
1,169,327	+				+0.7
1,169,327	+				-0.3
1,169,327	+				-0.4
1,169,328	-				+0.5
1,169,328	-				-0.4
1,169,328	-				-0.0
1,169,328	-				+0.1
1,169,328	-				-0.3
1,169,328	-				-1.6
1,169,328	-				-1.7
1,169,328	-				+0.5
1,169,328	-				+0.3
1,169,328	-				-0.9
1,169,328	-				+0.5
1,169,328	-				-0.0
1,169,328	-				-0.4
1,169,328	-				+0.1
1,169,328	-				+0.2
1,169,328	-				+1.2
1,169,328	-				+0.2
1,169,328	-				+0.4
1,169,328	-				-0.3
1,169,328	-				+0.7
1,169,328	-				-1.8
1,169,328	-				-0.3
1,169,328	-				-0.4
1,169,328	-				+0.3
1,169,328	-				-0.8
1,169,328	-				-1.9
1,169,328	-				+0.9
1,169,328	-				-1.2
1,169,328	-				-0.2
1,169,328	-				-1.5
1,169,328	-				-2.3
1,169,328	-				-0.6
1,169,328	-				+0.5
1,169,328	-				-1.8
1,169,328	-				+1.3
1,169,328	-				-0.2
1,169,328	-				-0.5
1,169,328	-				+0.3
1,169,328	-				-2.0
1,169,328	-				-0.2
1,169,328	-				-0.2
1,169,328	-				+1.1
1,169,328	-				-0.0
1,169,328	-				-0.6
1,169,328	-				-0.9
1,169,328	-				-1.3
1,169,328	-				-2.5
1,169,348	+				+1.4
1,169,348	+				-0.8
1,169,348	+				-0.1
1,169,348	+				-1.0
1,169,349	-				-0.3
1,169,349	-				-1.9
1,169,349	-				-2.5
1,169,349	-				-0.5
1,169,461	+				+1.0
1,169,469	+				-1.6
1,169,469	+				-2.4
1,169,469	+				+0.5
1,169,470	-				-1.3
1,169,470	-				+1.2
1,169,470	-				-2.4
1,169,471	+				-0.3
1,169,471	+				-1.3
1,169,471	+				-1.6
1,169,471	+				+0.3
1,169,471	+				-0.3
1,169,471	+				-0.5
1,169,471	+				-0.8
1,169,471	+				+0.0
1,169,471	+				+1.0
1,169,471	+				-0.5
1,169,471	+				-0.0
1,169,471	+				-0.8
1,169,471	+				+0.5
1,169,471	+				+1.1
1,169,471	+				+1.5
1,169,472	-				-0.8
1,169,472	-				+0.1
1,169,472	-				-0.8
1,169,472	-				-0.8
1,169,472	-				-0.8
1,169,628	+		MPMX19_01136	0.17	-0.8
1,169,628	+		MPMX19_01136	0.17	+0.2
1,169,628	+		MPMX19_01136	0.17	-0.2
1,169,628	+		MPMX19_01136	0.17	-1.0
1,169,629	-		MPMX19_01136	0.17	+0.1
1,169,629	-		MPMX19_01136	0.17	-0.9
1,169,629	-		MPMX19_01136	0.17	-2.2
1,169,629	-		MPMX19_01136	0.17	-1.3
1,169,629	-		MPMX19_01136	0.17	-1.2
1,169,629	-		MPMX19_01136	0.17	-1.0
1,169,629	-		MPMX19_01136	0.17	-0.2
1,169,689	+		MPMX19_01136	0.24	+0.7
1,169,689	+		MPMX19_01136	0.24	-0.5
1,169,689	+		MPMX19_01136	0.24	-1.8
1,169,689	+		MPMX19_01136	0.24	-1.5
1,169,689	+		MPMX19_01136	0.24	-1.3
1,169,689	+		MPMX19_01136	0.24	-1.5
1,169,689	+		MPMX19_01136	0.24	-1.5
1,169,690	-		MPMX19_01136	0.24	-1.5
1,169,690	-		MPMX19_01136	0.24	-1.8
1,169,690	-		MPMX19_01136	0.24	-0.9
1,169,690	-		MPMX19_01136	0.24	-0.2
1,169,690	-		MPMX19_01136	0.24	+0.2
1,169,690	-		MPMX19_01136	0.24	+0.2
1,169,690	-		MPMX19_01136	0.24	+0.8
1,169,690	-		MPMX19_01136	0.24	+1.1
1,169,785	+		MPMX19_01136	0.35	-1.8
1,169,785	+		MPMX19_01136	0.35	-0.3
1,169,785	+		MPMX19_01136	0.35	-0.3
1,169,785	+		MPMX19_01136	0.35	-0.5
1,169,785	+		MPMX19_01136	0.35	+1.1
1,169,785	+		MPMX19_01136	0.35	+1.3
1,169,785	+		MPMX19_01136	0.35	-0.0
1,169,785	+		MPMX19_01136	0.35	+1.4
1,169,785	+		MPMX19_01136	0.35	-0.9
1,169,785	+		MPMX19_01136	0.35	+0.2
1,169,786	-		MPMX19_01136	0.35	-1.6
1,169,786	-		MPMX19_01136	0.35	-0.2
1,169,786	-		MPMX19_01136	0.35	+0.4
1,169,798	+		MPMX19_01136	0.37	+0.3
1,169,799	-		MPMX19_01136	0.37	-1.5
1,169,799	-		MPMX19_01136	0.37	+0.2
1,169,896	+		MPMX19_01136	0.48	-0.7
1,169,896	+		MPMX19_01136	0.48	-0.9
1,169,896	+		MPMX19_01136	0.48	-0.1
1,169,896	+		MPMX19_01136	0.48	-0.1
1,169,896	+		MPMX19_01136	0.48	-0.4
1,169,896	+		MPMX19_01136	0.48	-0.9
1,169,897	-		MPMX19_01136	0.48	+0.5
1,169,897	-		MPMX19_01136	0.48	+0.4
1,169,897	-		MPMX19_01136	0.48	-1.9
1,169,897	-		MPMX19_01136	0.48	+1.0
1,169,897	-		MPMX19_01136	0.48	+0.5
1,169,897	-		MPMX19_01136	0.48	-1.1
1,169,897	-		MPMX19_01136	0.48	-0.0
1,169,897	-		MPMX19_01136	0.48	+1.0
1,169,897	-		MPMX19_01136	0.48	-0.2
1,169,897	-		MPMX19_01136	0.48	+1.1
1,169,897	-		MPMX19_01136	0.48	-0.0
1,169,897	-		MPMX19_01136	0.48	+0.1
1,169,897	-		MPMX19_01136	0.48	+0.4
1,169,897	-		MPMX19_01136	0.48	-0.8
1,169,995	+		MPMX19_01136	0.60	+1.5
1,169,995	+		MPMX19_01136	0.60	-0.7
1,169,995	+		MPMX19_01136	0.60	-0.2
1,169,995	+		MPMX19_01136	0.60	+0.3
1,169,995	+		MPMX19_01136	0.60	-0.0
1,169,995	+		MPMX19_01136	0.60	-0.2
1,169,995	+		MPMX19_01136	0.60	-1.0
1,169,995	+		MPMX19_01136	0.60	+0.2
1,169,995	+		MPMX19_01136	0.60	+0.8
1,169,995	+		MPMX19_01136	0.60	-2.3
1,169,995	+		MPMX19_01136	0.60	-0.0
1,169,995	+		MPMX19_01136	0.60	-1.2
1,169,996	-		MPMX19_01136	0.60	-0.9
1,169,996	-		MPMX19_01136	0.60	-1.3
1,169,996	-		MPMX19_01136	0.60	-0.0
1,169,996	-		MPMX19_01136	0.60	-0.0
1,169,996	-		MPMX19_01136	0.60	-0.3
1,169,996	-		MPMX19_01136	0.60	-0.3
1,169,996	-		MPMX19_01136	0.60	+1.2
1,169,996	-		MPMX19_01136	0.60	-0.1
1,169,996	-		MPMX19_01136	0.60	-1.3
1,169,996	-		MPMX19_01136	0.60	-0.4
1,169,996	-		MPMX19_01136	0.60	+0.4
1,169,996	-		MPMX19_01136	0.60	-1.1
1,169,996	-		MPMX19_01136	0.60	-1.8
1,169,996	-		MPMX19_01136	0.60	-0.8
1,169,996	-		MPMX19_01136	0.60	-0.7
1,169,996	-		MPMX19_01136	0.60	-0.0
1,169,996	-		MPMX19_01136	0.60	+0.9
1,170,334	+				-0.3
1,170,335	-				-0.3