Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01041

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,080,865	+				+0.7
1,080,865	+				-0.2
1,080,865	+				+1.8
1,080,866	-				-0.3
1,080,959	+				-0.1
1,080,959	+				-0.3
1,080,959	+				+0.7
1,080,959	+				-0.2
1,080,959	+				+1.9
1,080,959	+				-0.1
1,080,959	+				-1.5
1,080,959	+				+0.4
1,080,959	+				-1.3
1,080,959	+				-0.6
1,080,959	+				+0.5
1,080,959	+				-1.8
1,080,959	+				+0.8
1,080,959	+				+0.6
1,080,960	-				+0.4
1,080,960	-				-1.8
1,080,960	-				-1.0
1,080,960	-				+0.8
1,080,960	-				-1.9
1,080,960	-				+0.8
1,080,960	-				-1.6
1,080,960	-				+0.4
1,080,960	-				-1.5
1,080,960	-				-0.0
1,080,960	-				-0.2
1,080,960	-				+0.2
1,080,960	-				+0.4
1,080,960	-				-0.1
1,081,133	+		MPMX19_01040	0.27	-2.0
1,081,133	+		MPMX19_01040	0.27	-0.5
1,081,133	+		MPMX19_01040	0.27	+1.2
1,081,133	+		MPMX19_01040	0.27	-1.9
1,081,133	+		MPMX19_01040	0.27	-1.1
1,081,134	-		MPMX19_01040	0.27	+1.5
1,081,134	-		MPMX19_01040	0.27	+1.1
1,081,134	-		MPMX19_01040	0.27	+0.4
1,081,148	+		MPMX19_01040	0.29	+0.0
1,081,148	+		MPMX19_01040	0.29	+0.2
1,081,148	+		MPMX19_01040	0.29	-0.2
1,081,148	+		MPMX19_01040	0.29	+0.5
1,081,148	+		MPMX19_01040	0.29	-0.8
1,081,148	+		MPMX19_01040	0.29	-0.0
1,081,149	-		MPMX19_01040	0.29	+0.8
1,081,149	-		MPMX19_01040	0.29	-0.6
1,081,149	-		MPMX19_01040	0.29	-0.8
1,081,149	-		MPMX19_01040	0.29	-0.3
1,081,149	-		MPMX19_01040	0.29	-0.0
1,081,149	-		MPMX19_01040	0.29	-1.3
1,081,149	-		MPMX19_01040	0.29	-0.2
1,081,149	-		MPMX19_01040	0.29	-1.0
1,081,149	-		MPMX19_01040	0.29	-0.0
1,081,334	+		MPMX19_01040	0.50	+0.3
1,081,334	+		MPMX19_01040	0.50	+1.1
1,081,334	+		MPMX19_01040	0.50	-1.5
1,081,334	+		MPMX19_01040	0.50	+1.0
1,081,334	+		MPMX19_01040	0.50	-1.4
1,081,334	+		MPMX19_01040	0.50	-0.5
1,081,334	+		MPMX19_01040	0.50	-1.0
1,081,335	-		MPMX19_01040	0.50	-0.8
1,081,335	-		MPMX19_01040	0.50	-1.2
1,081,335	-		MPMX19_01040	0.50	-0.2
1,081,335	-		MPMX19_01040	0.50	-0.2
1,081,335	-		MPMX19_01040	0.50	+1.2
1,081,335	-		MPMX19_01040	0.50	+0.5
1,081,335	-		MPMX19_01040	0.50	+0.3
1,081,383	-		MPMX19_01040	0.56	-2.8
1,081,383	-		MPMX19_01040	0.56	-0.3
1,081,383	-		MPMX19_01040	0.56	-0.5
1,081,490	+		MPMX19_01040	0.68	+0.2
1,081,490	+		MPMX19_01040	0.68	-0.4
1,081,490	+		MPMX19_01040	0.68	-1.0
1,081,490	+		MPMX19_01040	0.68	-0.5
1,081,490	+		MPMX19_01040	0.68	-1.1
1,081,490	+		MPMX19_01040	0.68	-0.5
1,081,491	-		MPMX19_01040	0.69	+0.2
1,081,491	-		MPMX19_01040	0.69	-0.8
1,081,491	-		MPMX19_01040	0.69	+0.5
1,081,491	-		MPMX19_01040	0.69	-1.1
1,081,875	-				+1.0
1,081,988	+		MPMX19_01041	0.18	+0.7
1,081,988	+		MPMX19_01041	0.18	+0.2
1,081,988	+		MPMX19_01041	0.18	-0.9
1,081,988	+		MPMX19_01041	0.18	-2.3
1,081,988	+		MPMX19_01041	0.18	-0.8
1,081,988	+		MPMX19_01041	0.18	-0.8
1,081,988	+		MPMX19_01041	0.18	+0.5
1,081,988	+		MPMX19_01041	0.18	-0.8
1,081,988	+		MPMX19_01041	0.18	-1.5
1,081,988	+		MPMX19_01041	0.18	-0.2
1,081,988	+		MPMX19_01041	0.18	-0.3
1,081,988	+		MPMX19_01041	0.18	-0.2
1,081,988	+		MPMX19_01041	0.18	+1.5
1,081,988	+		MPMX19_01041	0.18	+0.4
1,081,988	+		MPMX19_01041	0.18	-1.1
1,081,988	+		MPMX19_01041	0.18	-1.0
1,081,988	+		MPMX19_01041	0.18	-1.5
1,081,988	+		MPMX19_01041	0.18	-1.6
1,081,989	-		MPMX19_01041	0.18	-0.8
1,081,989	-		MPMX19_01041	0.18	-1.0
1,081,989	-		MPMX19_01041	0.18	-0.6
1,081,989	-		MPMX19_01041	0.18	-0.2
1,081,989	-		MPMX19_01041	0.18	+0.9
1,081,989	-		MPMX19_01041	0.18	-1.6
1,081,989	-		MPMX19_01041	0.18	-1.0
1,081,989	-		MPMX19_01041	0.18	-0.6
1,081,989	-		MPMX19_01041	0.18	-0.2
1,081,989	-		MPMX19_01041	0.18	-2.0
1,081,989	-		MPMX19_01041	0.18	-1.4
1,081,989	-		MPMX19_01041	0.18	-0.8
1,081,989	-		MPMX19_01041	0.18	+0.2
1,081,989	-		MPMX19_01041	0.18	+0.7
1,081,989	-		MPMX19_01041	0.18	-0.8
1,081,989	-		MPMX19_01041	0.18	-0.5
1,081,997	+		MPMX19_01041	0.18	-0.5
1,081,997	+		MPMX19_01041	0.18	+0.3
1,081,997	+		MPMX19_01041	0.18	-0.6
1,081,997	+		MPMX19_01041	0.18	+0.2
1,081,997	+		MPMX19_01041	0.18	+1.1
1,081,997	+		MPMX19_01041	0.18	-0.3
1,081,997	+		MPMX19_01041	0.18	-0.2
1,081,998	-		MPMX19_01041	0.18	-0.5
1,081,998	-		MPMX19_01041	0.18	-1.4
1,081,998	-		MPMX19_01041	0.18	-0.6
1,081,998	-		MPMX19_01041	0.18	-0.5
1,081,998	-		MPMX19_01041	0.18	-1.2
1,081,998	-		MPMX19_01041	0.18	-0.2
1,082,054	+		MPMX19_01041	0.23	+1.3
1,082,054	+		MPMX19_01041	0.23	-1.1
1,082,054	+		MPMX19_01041	0.23	-0.5
1,082,054	+		MPMX19_01041	0.23	+0.3
1,082,054	+		MPMX19_01041	0.23	+0.2
1,082,054	+		MPMX19_01041	0.23	+0.2
1,082,054	+		MPMX19_01041	0.23	-0.3
1,082,054	+		MPMX19_01041	0.23	-1.3
1,082,054	+		MPMX19_01041	0.23	-0.2
1,082,054	+		MPMX19_01041	0.23	-1.5
1,082,054	+		MPMX19_01041	0.23	-0.3
1,082,054	+		MPMX19_01041	0.23	-0.5
1,082,054	+		MPMX19_01041	0.23	-0.8
1,082,054	+		MPMX19_01041	0.23	-0.6
1,082,054	+		MPMX19_01041	0.23	+0.3
1,082,054	+		MPMX19_01041	0.23	-0.5
1,082,054	+		MPMX19_01041	0.23	+0.9
1,082,054	+		MPMX19_01041	0.23	-0.0
1,082,054	+		MPMX19_01041	0.23	+1.5
1,082,054	+		MPMX19_01041	0.23	-0.6
1,082,054	+		MPMX19_01041	0.23	-0.9
1,082,054	+		MPMX19_01041	0.23	-2.4
1,082,054	+		MPMX19_01041	0.23	-0.2
1,082,054	+		MPMX19_01041	0.23	-1.2
1,082,054	+		MPMX19_01041	0.23	-1.2
1,082,055	-		MPMX19_01041	0.23	+0.4
1,082,055	-		MPMX19_01041	0.23	-1.5
1,082,055	-		MPMX19_01041	0.23	-1.8
1,082,055	-		MPMX19_01041	0.23	-1.5
1,082,055	-		MPMX19_01041	0.23	-0.8
1,082,055	-		MPMX19_01041	0.23	-0.6
1,082,055	-		MPMX19_01041	0.23	-1.4
1,082,055	-		MPMX19_01041	0.23	-0.9
1,082,055	-		MPMX19_01041	0.23	+0.1
1,082,055	-		MPMX19_01041	0.23	-0.7
1,082,055	-		MPMX19_01041	0.23	+0.9
1,082,055	-		MPMX19_01041	0.23	-0.4
1,082,055	-		MPMX19_01041	0.23	-0.0
1,082,055	-		MPMX19_01041	0.23	-0.6
1,082,055	-		MPMX19_01041	0.23	-0.1
1,082,055	-		MPMX19_01041	0.23	+1.2
1,082,055	-		MPMX19_01041	0.23	+0.3
1,082,055	-		MPMX19_01041	0.23	-1.3
1,082,055	-		MPMX19_01041	0.23	-1.3
1,082,055	-		MPMX19_01041	0.23	-0.5
1,082,055	-		MPMX19_01041	0.23	-1.0
1,082,055	-		MPMX19_01041	0.23	-0.5
1,082,063	+		MPMX19_01041	0.24	+0.0
1,082,063	+		MPMX19_01041	0.24	-1.2
1,082,063	+		MPMX19_01041	0.24	+0.5
1,082,064	-		MPMX19_01041	0.24	-0.4
1,082,064	-		MPMX19_01041	0.24	-0.8
1,082,078	+		MPMX19_01041	0.25	+0.8
1,082,078	+		MPMX19_01041	0.25	+0.3
1,082,078	+		MPMX19_01041	0.25	+0.1
1,082,078	+		MPMX19_01041	0.25	+0.2
1,082,078	+		MPMX19_01041	0.25	-0.8
1,082,078	+		MPMX19_01041	0.25	+0.4
1,082,078	+		MPMX19_01041	0.25	-0.8
1,082,078	+		MPMX19_01041	0.25	-0.1
1,082,078	+		MPMX19_01041	0.25	+0.1
1,082,078	+		MPMX19_01041	0.25	+0.3
1,082,078	+		MPMX19_01041	0.25	-1.8
1,082,079	-		MPMX19_01041	0.25	+0.1
1,082,079	-		MPMX19_01041	0.25	-1.8
1,082,079	-		MPMX19_01041	0.25	-0.8
1,082,079	-		MPMX19_01041	0.25	-1.2
1,082,079	-		MPMX19_01041	0.25	-0.6
1,082,079	-		MPMX19_01041	0.25	-0.0
1,082,079	-		MPMX19_01041	0.25	-1.0
1,082,079	-		MPMX19_01041	0.25	-0.8
1,082,079	-		MPMX19_01041	0.25	+0.4
1,082,079	-		MPMX19_01041	0.25	-1.9
1,082,079	-		MPMX19_01041	0.25	-2.9
1,082,079	-		MPMX19_01041	0.25	-0.3
1,082,079	-		MPMX19_01041	0.25	-1.5
1,082,079	-		MPMX19_01041	0.25	-1.8
1,082,079	-		MPMX19_01041	0.25	-1.6
1,082,079	-		MPMX19_01041	0.25	-0.5
1,082,465	+		MPMX19_01041	0.58	+0.5
1,082,465	+		MPMX19_01041	0.58	+0.4
1,082,465	+		MPMX19_01041	0.58	+0.4
1,082,466	-		MPMX19_01041	0.58	+0.8
1,082,466	-		MPMX19_01041	0.58	-0.0
1,082,604	-		MPMX19_01041	0.70	+1.7
1,082,693	+		MPMX19_01041	0.78	-1.3
1,082,693	+		MPMX19_01041	0.78	-1.6
1,082,693	+		MPMX19_01041	0.78	-1.7
1,082,694	-		MPMX19_01041	0.78	-1.0
1,082,694	-		MPMX19_01041	0.78	-0.3
1,082,694	-		MPMX19_01041	0.78	+1.5
1,082,729	+		MPMX19_01041	0.81	-0.0
1,082,729	+		MPMX19_01041	0.81	+0.1
1,082,729	+		MPMX19_01041	0.81	-1.1
1,082,729	+		MPMX19_01041	0.81	-0.1
1,082,729	+		MPMX19_01041	0.81	-0.3
1,082,729	+		MPMX19_01041	0.81	-0.6
1,082,729	+		MPMX19_01041	0.81	-1.6
1,082,729	+		MPMX19_01041	0.81	+1.0
1,082,729	+		MPMX19_01041	0.81	-0.7
1,082,729	+		MPMX19_01041	0.81	+0.1
1,082,729	+		MPMX19_01041	0.81	+0.5
1,082,729	+		MPMX19_01041	0.81	+0.8
1,082,729	+		MPMX19_01041	0.81	+0.4
1,082,729	+		MPMX19_01041	0.81	-0.0
1,082,730	-		MPMX19_01041	0.81	-1.9
1,082,730	-		MPMX19_01041	0.81	+0.7
1,082,730	-		MPMX19_01041	0.81	-0.2
1,082,730	-		MPMX19_01041	0.81	-0.6
1,082,730	-		MPMX19_01041	0.81	-1.2
1,082,730	-		MPMX19_01041	0.81	-2.0
1,082,730	-		MPMX19_01041	0.81	+1.1
1,082,730	-		MPMX19_01041	0.81	+0.7
1,082,730	-		MPMX19_01041	0.81	+0.6
1,082,730	-		MPMX19_01041	0.81	-0.5
1,082,730	-		MPMX19_01041	0.81	-0.9
1,082,730	-		MPMX19_01041	0.81	+0.4
1,082,730	-		MPMX19_01041	0.81	-2.6
1,082,730	-		MPMX19_01041	0.81	-0.2
1,082,730	-		MPMX19_01041	0.81	-0.8
1,082,730	-		MPMX19_01041	0.81	-0.5
1,082,730	-		MPMX19_01041	0.81	-0.1
1,082,730	-		MPMX19_01041	0.81	+0.2
1,082,834	+		MPMX19_01041	0.90	-0.8
1,082,835	-		MPMX19_01041	0.90	-0.8
1,082,977	+				-0.3
1,082,977	+				+0.8
1,082,977	+				-1.6
1,082,978	-				-0.0
1,082,978	-				-0.9
1,083,106	+				-0.9
1,083,106	+				-1.1
1,083,107	-				-0.8
1,083,107	-				-1.0
1,083,107	-				+0.4
1,083,107	-				+0.0
1,083,169	+				+2.0
1,083,276	+		MPMX19_01042	0.27	-1.0
1,083,440	+		MPMX19_01042	0.59	-0.9
1,083,440	+		MPMX19_01042	0.59	-0.9
1,083,558	+		MPMX19_01042	0.83	-2.5
1,083,558	+		MPMX19_01042	0.83	-0.2
1,083,558	+		MPMX19_01042	0.83	-0.2
1,083,558	+		MPMX19_01042	0.83	-1.2
1,083,558	+		MPMX19_01042	0.83	+0.7
1,083,558	+		MPMX19_01042	0.83	+0.8
1,083,558	+		MPMX19_01042	0.83	-0.5
1,083,559	-		MPMX19_01042	0.83	+0.7
1,083,559	-		MPMX19_01042	0.83	-0.6
1,083,559	-		MPMX19_01042	0.83	-1.2
1,083,559	-		MPMX19_01042	0.83	-0.2
1,083,559	-		MPMX19_01042	0.83	-0.6
1,083,559	-		MPMX19_01042	0.83	-0.8
1,083,559	-		MPMX19_01042	0.83	-1.0
1,083,643	+				-0.8
1,083,643	+				-0.0
1,083,643	+				+0.8
1,083,643	+				+0.9
1,083,644	-				+0.4
1,083,644	-				-0.0
1,083,658	+				-0.6
1,083,658	+				-0.8
1,083,658	+				-0.1
1,083,658	+				-0.0
1,083,658	+				-1.1
1,083,658	+				-1.5
1,083,658	+				+0.3
1,083,658	+				-0.8
1,083,659	+				-1.5
1,083,659	-				-1.6
1,083,659	-				+0.5
1,083,659	-				+0.9
1,083,659	-				-0.3
1,083,659	-				-2.4
1,083,659	-				-0.7
1,083,659	-				+1.1
1,083,659	-				+0.9
1,083,659	-				-0.7
1,083,659	-				-1.5
1,083,662	+				-0.4
1,083,662	+				-0.9
1,083,662	+				-1.3
1,083,662	+				-0.9
1,083,662	+				-0.0
1,083,663	-				+1.3
1,083,663	-				-1.5
1,083,663	-				+0.0
1,083,663	-				+1.1
1,083,663	-				-0.1
1,083,663	-				-0.4
1,083,807	+		MPMX19_01043	0.19	-0.5
1,083,807	+		MPMX19_01043	0.19	-0.4
1,083,807	+		MPMX19_01043	0.19	+0.2
1,083,807	+		MPMX19_01043	0.19	-0.7
1,083,807	+		MPMX19_01043	0.19	-0.3
1,083,807	+		MPMX19_01043	0.19	-0.3
1,083,807	+		MPMX19_01043	0.19	-0.5
1,083,807	+		MPMX19_01043	0.19	+0.4
1,083,807	+		MPMX19_01043	0.19	+1.3
1,083,808	-		MPMX19_01043	0.20	-1.7
1,083,808	-		MPMX19_01043	0.20	-2.8
1,083,808	-		MPMX19_01043	0.20	+0.1
1,083,808	-		MPMX19_01043	0.20	+0.1
1,083,808	-		MPMX19_01043	0.20	-0.2
1,083,808	-		MPMX19_01043	0.20	-2.0
1,083,808	-		MPMX19_01043	0.20	-0.5
1,083,808	-		MPMX19_01043	0.20	-0.3
1,083,808	-		MPMX19_01043	0.20	+0.5
1,083,808	-		MPMX19_01043	0.20	-0.8
1,083,812	+		MPMX19_01043	0.20	-2.0
1,083,813	-		MPMX19_01043	0.20	+0.8
1,083,848	+		MPMX19_01043	0.26	-0.2
1,083,848	+		MPMX19_01043	0.26	-1.5
1,083,848	+		MPMX19_01043	0.26	-0.3
1,083,848	+		MPMX19_01043	0.26	+0.1
1,083,848	+		MPMX19_01043	0.26	+0.7
1,083,848	+		MPMX19_01043	0.26	-1.3
1,083,848	+		MPMX19_01043	0.26	-1.1
1,083,849	-		MPMX19_01043	0.26	-0.0
1,083,849	-		MPMX19_01043	0.26	-0.5
1,083,849	-		MPMX19_01043	0.26	-0.5
1,083,849	-		MPMX19_01043	0.26	+0.5
1,083,863	+		MPMX19_01043	0.28	+0.3
1,083,863	+		MPMX19_01043	0.28	-0.1
1,083,863	+		MPMX19_01043	0.28	+1.3
1,083,863	+		MPMX19_01043	0.28	-0.7
1,083,863	+		MPMX19_01043	0.28	-0.0
1,083,863	+		MPMX19_01043	0.28	-0.8
1,083,863	+		MPMX19_01043	0.28	-1.0
1,083,863	+		MPMX19_01043	0.28	+1.3
1,083,863	+		MPMX19_01043	0.28	-0.6
1,083,863	+		MPMX19_01043	0.28	-0.8
1,083,863	+		MPMX19_01043	0.28	-0.6
1,083,863	+		MPMX19_01043	0.28	-0.9
1,083,863	+		MPMX19_01043	0.28	-0.5
1,083,863	+		MPMX19_01043	0.28	-0.6
1,083,863	+		MPMX19_01043	0.28	-2.0
1,083,864	-		MPMX19_01043	0.28	-1.2
1,083,864	-		MPMX19_01043	0.28	-1.1
1,083,864	-		MPMX19_01043	0.28	-0.0
1,083,864	-		MPMX19_01043	0.28	+0.5
1,083,864	-		MPMX19_01043	0.28	-0.9
1,083,864	-		MPMX19_01043	0.28	+1.1
1,083,864	-		MPMX19_01043	0.28	-0.9
1,083,864	-		MPMX19_01043	0.28	+0.1
1,083,864	-		MPMX19_01043	0.28	+0.7
1,083,864	-		MPMX19_01043	0.28	+0.8