Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00965

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,003,762	+		MPMX19_00964	0.46	-0.7
1,003,762	+		MPMX19_00964	0.46	-1.1
1,003,762	+		MPMX19_00964	0.46	+0.9
1,003,762	+		MPMX19_00964	0.46	+0.7
1,003,762	+		MPMX19_00964	0.46	+0.2
1,003,762	+		MPMX19_00964	0.46	-0.5
1,003,762	+		MPMX19_00964	0.46	-0.2
1,003,762	+		MPMX19_00964	0.46	+0.2
1,003,762	+		MPMX19_00964	0.46	-1.5
1,003,762	+		MPMX19_00964	0.46	-0.8
1,003,762	+		MPMX19_00964	0.46	-0.2
1,003,762	+		MPMX19_00964	0.46	-0.6
1,003,762	+		MPMX19_00964	0.46	+0.2
1,003,762	+		MPMX19_00964	0.46	-2.1
1,003,762	+		MPMX19_00964	0.46	-0.9
1,003,762	+		MPMX19_00964	0.46	-0.7
1,003,762	+		MPMX19_00964	0.46	+0.3
1,003,762	+		MPMX19_00964	0.46	-0.6
1,003,762	+		MPMX19_00964	0.46	-1.5
1,003,762	+		MPMX19_00964	0.46	+1.5
1,003,762	+		MPMX19_00964	0.46	+0.8
1,003,762	+		MPMX19_00964	0.46	-1.8
1,003,762	+		MPMX19_00964	0.46	-0.2
1,003,762	+		MPMX19_00964	0.46	-0.5
1,003,762	+		MPMX19_00964	0.46	+1.0
1,003,762	+		MPMX19_00964	0.46	-0.8
1,003,762	+		MPMX19_00964	0.46	+0.3
1,003,762	+		MPMX19_00964	0.46	-1.0
1,003,762	+		MPMX19_00964	0.46	-0.4
1,003,762	+		MPMX19_00964	0.46	-1.0
1,003,762	+		MPMX19_00964	0.46	-1.5
1,003,762	+		MPMX19_00964	0.46	-1.4
1,003,762	+		MPMX19_00964	0.46	+0.3
1,003,762	+		MPMX19_00964	0.46	-0.5
1,003,762	+		MPMX19_00964	0.46	-1.9
1,003,762	+		MPMX19_00964	0.46	-0.9
1,003,762	+		MPMX19_00964	0.46	-1.6
1,003,762	+		MPMX19_00964	0.46	-1.6
1,003,762	+		MPMX19_00964	0.46	-1.2
1,003,762	+		MPMX19_00964	0.46	+0.5
1,003,762	+		MPMX19_00964	0.46	-1.3
1,003,762	+		MPMX19_00964	0.46	-1.6
1,003,762	+		MPMX19_00964	0.46	-0.4
1,003,762	+		MPMX19_00964	0.46	-0.3
1,003,762	+		MPMX19_00964	0.46	+0.5
1,003,762	+		MPMX19_00964	0.46	-1.3
1,003,762	+		MPMX19_00964	0.46	+0.5
1,003,763	-		MPMX19_00964	0.46	-0.9
1,003,763	-		MPMX19_00964	0.46	-0.5
1,003,763	-		MPMX19_00964	0.46	+0.7
1,003,763	-		MPMX19_00964	0.46	-2.3
1,003,763	-		MPMX19_00964	0.46	+0.4
1,003,763	-		MPMX19_00964	0.46	-1.0
1,003,763	-		MPMX19_00964	0.46	-1.0
1,003,763	-		MPMX19_00964	0.46	-0.9
1,003,763	-		MPMX19_00964	0.46	+0.0
1,003,763	-		MPMX19_00964	0.46	+1.1
1,003,763	-		MPMX19_00964	0.46	-0.8
1,003,763	-		MPMX19_00964	0.46	-0.2
1,003,763	-		MPMX19_00964	0.46	-0.7
1,003,763	-		MPMX19_00964	0.46	-0.2
1,003,763	-		MPMX19_00964	0.46	-0.5
1,003,763	-		MPMX19_00964	0.46	+0.5
1,003,763	-		MPMX19_00964	0.46	-1.9
1,003,763	-		MPMX19_00964	0.46	+1.4
1,003,763	-		MPMX19_00964	0.46	-1.3
1,003,763	-		MPMX19_00964	0.46	+0.1
1,003,763	-		MPMX19_00964	0.46	-0.2
1,003,763	-		MPMX19_00964	0.46	-0.6
1,003,763	-		MPMX19_00964	0.46	+0.4
1,003,763	-		MPMX19_00964	0.46	+0.0
1,003,763	-		MPMX19_00964	0.46	+0.4
1,003,763	-		MPMX19_00964	0.46	+0.4
1,003,763	-		MPMX19_00964	0.46	-0.5
1,003,763	-		MPMX19_00964	0.46	-0.8
1,003,763	-		MPMX19_00964	0.46	+0.3
1,003,763	-		MPMX19_00964	0.46	-0.1
1,003,763	-		MPMX19_00964	0.46	-0.8
1,003,763	-		MPMX19_00964	0.46	-0.0
1,003,763	-		MPMX19_00964	0.46	+0.5
1,003,763	-		MPMX19_00964	0.46	-0.3
1,003,763	-		MPMX19_00964	0.46	-0.3
1,003,763	-		MPMX19_00964	0.46	-1.5
1,003,763	-		MPMX19_00964	0.46	-0.8
1,003,763	-		MPMX19_00964	0.46	-0.9
1,003,763	-		MPMX19_00964	0.46	-2.0
1,003,763	-		MPMX19_00964	0.46	+0.1
1,003,763	-		MPMX19_00964	0.46	+0.5
1,003,763	-		MPMX19_00964	0.46	-0.7
1,003,763	-		MPMX19_00964	0.46	-1.4
1,003,763	-		MPMX19_00964	0.46	-0.8
1,003,873	+		MPMX19_00964	0.52	-1.0
1,003,873	+		MPMX19_00964	0.52	+0.1
1,003,873	+		MPMX19_00964	0.52	-0.1
1,003,873	+		MPMX19_00964	0.52	+0.3
1,003,873	+		MPMX19_00964	0.52	+0.1
1,003,873	+		MPMX19_00964	0.52	-0.2
1,003,873	+		MPMX19_00964	0.52	+0.1
1,003,873	+		MPMX19_00964	0.52	-1.6
1,003,873	+		MPMX19_00964	0.52	-0.1
1,003,873	+		MPMX19_00964	0.52	+1.5
1,003,873	+		MPMX19_00964	0.52	+0.1
1,003,873	+		MPMX19_00964	0.52	+1.0
1,003,873	+		MPMX19_00964	0.52	-0.9
1,003,873	+		MPMX19_00964	0.52	-0.0
1,003,873	+		MPMX19_00964	0.52	-1.3
1,003,873	+		MPMX19_00964	0.52	+0.4
1,003,874	-		MPMX19_00964	0.53	-0.5
1,003,874	-		MPMX19_00964	0.53	-0.4
1,003,874	-		MPMX19_00964	0.53	-0.6
1,003,874	-		MPMX19_00964	0.53	+0.4
1,003,874	-		MPMX19_00964	0.53	-0.1
1,003,874	-		MPMX19_00964	0.53	+0.5
1,003,874	-		MPMX19_00964	0.53	-0.7
1,003,874	-		MPMX19_00964	0.53	-0.2
1,003,874	-		MPMX19_00964	0.53	-2.5
1,003,874	-		MPMX19_00964	0.53	+0.5
1,004,044	+		MPMX19_00964	0.63	-2.5
1,004,044	+		MPMX19_00964	0.63	+0.4
1,004,044	+		MPMX19_00964	0.63	-1.3
1,004,044	+		MPMX19_00964	0.63	+1.2
1,004,044	+		MPMX19_00964	0.63	+0.4
1,004,044	+		MPMX19_00964	0.63	+0.8
1,004,045	-		MPMX19_00964	0.63	-0.9
1,004,218	+		MPMX19_00964	0.74	-1.3
1,004,219	-		MPMX19_00964	0.74	-0.8
1,004,219	-		MPMX19_00964	0.74	-1.6
1,004,219	-		MPMX19_00964	0.74	-0.9
1,004,645	+				+0.9
1,004,645	+				-0.3
1,004,645	+				+0.4
1,004,645	+				+0.2
1,004,645	+				+0.7
1,004,645	+				-0.9
1,004,646	-				-0.5
1,004,763	+		MPMX19_00965	0.16	-1.9
1,004,763	+		MPMX19_00965	0.16	-0.2
1,004,764	-		MPMX19_00965	0.16	-0.7
1,004,764	-		MPMX19_00965	0.16	-2.3
1,004,764	-		MPMX19_00965	0.16	-1.3
1,004,764	-		MPMX19_00965	0.16	-1.9
1,004,926	-		MPMX19_00965	0.37	+0.2
1,004,926	-		MPMX19_00965	0.37	+1.2
1,004,926	-		MPMX19_00965	0.37	-0.5
1,004,973	+		MPMX19_00965	0.43	-0.1
1,004,973	+		MPMX19_00965	0.43	+0.0
1,004,973	+		MPMX19_00965	0.43	+0.5
1,004,973	+		MPMX19_00965	0.43	+1.0
1,004,973	+		MPMX19_00965	0.43	-0.0
1,004,973	+		MPMX19_00965	0.43	-0.7
1,004,973	+		MPMX19_00965	0.43	-0.5
1,004,973	+		MPMX19_00965	0.43	-0.3
1,004,973	+		MPMX19_00965	0.43	-1.6
1,004,973	+		MPMX19_00965	0.43	+0.4
1,004,973	+		MPMX19_00965	0.43	-1.5
1,004,973	+		MPMX19_00965	0.43	-2.7
1,004,973	+		MPMX19_00965	0.43	-0.0
1,004,973	+		MPMX19_00965	0.43	+0.7
1,004,973	+		MPMX19_00965	0.43	-0.0
1,004,973	+		MPMX19_00965	0.43	-0.5
1,004,973	+		MPMX19_00965	0.43	+0.4
1,004,974	-		MPMX19_00965	0.43	-1.5
1,004,974	-		MPMX19_00965	0.43	-1.6
1,004,974	-		MPMX19_00965	0.43	+0.4
1,004,974	-		MPMX19_00965	0.43	-1.6
1,004,974	-		MPMX19_00965	0.43	-0.5
1,004,974	-		MPMX19_00965	0.43	-1.6
1,004,974	-		MPMX19_00965	0.43	+2.4
1,004,974	-		MPMX19_00965	0.43	-1.3
1,004,974	-		MPMX19_00965	0.43	+0.1
1,004,974	-		MPMX19_00965	0.43	+1.2
1,004,974	-		MPMX19_00965	0.43	+1.0
1,004,974	-		MPMX19_00965	0.43	+0.1
1,004,974	-		MPMX19_00965	0.43	-1.5
1,004,974	-		MPMX19_00965	0.43	+0.9
1,004,974	-		MPMX19_00965	0.43	+0.3
1,004,974	-		MPMX19_00965	0.43	-0.0
1,004,974	-		MPMX19_00965	0.43	-0.5
1,004,974	-		MPMX19_00965	0.43	-0.4
1,004,979	+		MPMX19_00965	0.43	-0.5
1,004,980	-		MPMX19_00965	0.44	-2.2
1,004,980	-		MPMX19_00965	0.44	-0.7
1,005,024	+		MPMX19_00965	0.49	-1.3
1,005,024	+		MPMX19_00965	0.49	+1.4
1,005,024	+		MPMX19_00965	0.49	-0.0
1,005,024	+		MPMX19_00965	0.49	-1.4
1,005,024	+		MPMX19_00965	0.49	+0.2
1,005,024	+		MPMX19_00965	0.49	-0.5
1,005,024	+		MPMX19_00965	0.49	-2.9
1,005,024	+		MPMX19_00965	0.49	+0.1
1,005,024	+		MPMX19_00965	0.49	+0.7
1,005,024	+		MPMX19_00965	0.49	-0.9
1,005,024	+		MPMX19_00965	0.49	-1.2
1,005,024	+		MPMX19_00965	0.49	+0.9
1,005,024	+		MPMX19_00965	0.49	-0.8
1,005,025	-		MPMX19_00965	0.49	-2.0
1,005,025	-		MPMX19_00965	0.49	-0.3
1,005,025	-		MPMX19_00965	0.49	-0.4
1,005,025	-		MPMX19_00965	0.49	-0.4
1,005,025	-		MPMX19_00965	0.49	-1.6
1,005,025	-		MPMX19_00965	0.49	-0.9
1,005,025	-		MPMX19_00965	0.49	-2.9
1,005,025	-		MPMX19_00965	0.49	-0.8
1,005,025	-		MPMX19_00965	0.49	-0.8
1,005,025	-		MPMX19_00965	0.49	-0.7
1,005,025	-		MPMX19_00965	0.49	-0.9
1,005,175	-		MPMX19_00965	0.68	-1.3
1,005,175	-		MPMX19_00965	0.68	-1.2
1,005,282	+		MPMX19_00965	0.82	+0.6
1,005,282	+		MPMX19_00965	0.82	+0.4
1,005,282	+		MPMX19_00965	0.82	-1.5
1,005,282	+		MPMX19_00965	0.82	-1.8
1,005,282	+		MPMX19_00965	0.82	-1.0
1,005,283	-		MPMX19_00965	0.82	-0.3
1,005,283	-		MPMX19_00965	0.82	-1.4
1,005,283	-		MPMX19_00965	0.82	-0.9
1,005,283	-		MPMX19_00965	0.82	+1.0
1,005,283	-		MPMX19_00965	0.82	-1.5
1,005,283	-		MPMX19_00965	0.82	-0.1
1,005,283	-		MPMX19_00965	0.82	-0.4
1,005,297	+		MPMX19_00965	0.84	-0.3
1,005,297	+		MPMX19_00965	0.84	-0.4
1,005,297	+		MPMX19_00965	0.84	+0.2
1,005,297	+		MPMX19_00965	0.84	-0.3
1,005,297	+		MPMX19_00965	0.84	-1.5
1,005,298	-		MPMX19_00965	0.84	+0.3
1,005,298	-		MPMX19_00965	0.84	-0.3
1,005,298	-		MPMX19_00965	0.84	-0.5
1,005,298	-		MPMX19_00965	0.84	+0.5
1,005,298	-		MPMX19_00965	0.84	-0.7
1,005,441	+				+1.0
1,005,441	+				-0.0
1,005,441	+				-1.5
1,005,441	+				-0.5
1,005,441	+				-0.8
1,005,441	+				-1.3
1,005,441	+				-0.9
1,005,441	+				-0.3
1,005,442	-				+0.2
1,005,442	-				-0.6
1,005,442	-				+0.3
1,005,442	-				+0.5
1,005,442	-				-0.6
1,005,442	-				-0.0
1,005,455	+				-0.5
1,005,455	+				-0.2
1,005,455	+				-0.0
1,005,455	+				-1.2
1,005,455	+				+0.4
1,005,455	+				-0.0
1,005,456	-				-1.2
1,005,456	-				-1.0
1,005,456	-				+0.5
1,005,456	-				-0.5
1,005,456	-				+0.2
1,005,466	+				-0.5
1,005,466	+				+0.1
1,005,474	+				-1.0
1,005,507	+				-0.1
1,005,507	+				+1.2
1,005,508	-				-2.5
1,005,508	-				-0.6
1,005,519	+				+0.3
1,005,519	+				-0.8
1,005,519	+				+0.4
1,006,079	-		MPMX19_00966	0.29	-1.9
1,006,187	+		MPMX19_00966	0.35	+1.1
1,006,187	+		MPMX19_00966	0.35	+0.2
1,006,187	+		MPMX19_00966	0.35	+0.7
1,006,187	+		MPMX19_00966	0.35	-0.0
1,006,187	+		MPMX19_00966	0.35	-1.0
1,006,188	-		MPMX19_00966	0.35	+0.4
1,006,390	+		MPMX19_00966	0.47	-1.9
1,006,392	+		MPMX19_00966	0.47	+0.5
1,006,392	+		MPMX19_00966	0.47	+0.2
1,006,392	+		MPMX19_00966	0.47	-1.0
1,006,392	+		MPMX19_00966	0.47	-0.6
1,006,393	-		MPMX19_00966	0.47	-1.2
1,006,393	-		MPMX19_00966	0.47	-2.7
1,006,393	-		MPMX19_00966	0.47	-0.9
1,006,393	-		MPMX19_00966	0.47	-0.0
1,006,393	-		MPMX19_00966	0.47	+1.8
1,006,393	-		MPMX19_00966	0.47	-1.3
1,006,393	-		MPMX19_00966	0.47	-1.8
1,006,393	-		MPMX19_00966	0.47	-0.1
1,006,393	-		MPMX19_00966	0.47	+0.1
1,006,393	-		MPMX19_00966	0.47	-0.5
1,006,393	-		MPMX19_00966	0.47	+0.1
1,006,393	-		MPMX19_00966	0.47	-0.3