Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00760 and MPMX19_00761 are separated by 200 nucleotides MPMX19_00761 and MPMX19_00762 are separated by 145 nucleotides MPMX19_00762 and MPMX19_00763 are separated by 94 nucleotides
MPMX19_00760: MPMX19_00760 - DNA primase, at 774,955 to 776,862
_00760
MPMX19_00761: MPMX19_00761 - RNA polymerase sigma factor RpoD, at 777,063 to 779,096
_00761
MPMX19_00762: MPMX19_00762 - tRNA-Met, at 779,242 to 779,317
_00762
MPMX19_00763: MPMX19_00763 - hypothetical protein, at 779,412 to 781,043
_00763
Position (kb) 777
778
779
780 Strain fitness (log2 ratio) -2
-1
0
1
2 at 776.877 kb on + strand at 776.877 kb on + strand at 776.877 kb on + strand at 776.877 kb on + strand at 776.877 kb on + strand at 776.877 kb on + strand at 776.877 kb on + strand at 776.877 kb on + strand at 776.877 kb on + strand at 776.877 kb on + strand at 776.877 kb on + strand at 776.908 kb on + strand at 776.908 kb on + strand at 776.908 kb on + strand at 776.908 kb on + strand at 776.908 kb on + strand at 776.964 kb on + strand at 776.964 kb on + strand at 776.964 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 776.968 kb on + strand at 779.589 kb on + strand, within MPMX19_00763 at 779.589 kb on + strand, within MPMX19_00763 at 779.589 kb on + strand, within MPMX19_00763 at 779.589 kb on + strand, within MPMX19_00763 at 779.589 kb on + strand, within MPMX19_00763 at 779.590 kb on - strand, within MPMX19_00763 at 779.590 kb on - strand, within MPMX19_00763 at 779.590 kb on - strand, within MPMX19_00763 at 779.590 kb on - strand, within MPMX19_00763 at 779.755 kb on - strand, within MPMX19_00763
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 776,877 + -1.0 776,877 + -1.1 776,877 + -0.2 776,877 + -0.7 776,877 + -1.2 776,877 + -0.4 776,877 + -0.7 776,877 + +0.1 776,877 + +0.4 776,877 + -1.4 776,877 + -0.7 776,908 + +0.8 776,908 + +0.5 776,908 + +0.6 776,908 + +0.6 776,908 + -0.4 776,964 + -1.0 776,964 + -0.4 776,964 + -0.9 776,968 + +1.0 776,968 + -1.4 776,968 + -0.0 776,968 + -0.7 776,968 + -2.2 776,968 + -0.4 776,968 + +1.6 776,968 + -0.7 776,968 + -1.8 776,968 + +0.6 776,968 + -0.7 776,968 + +0.6 776,968 + -0.7 776,968 + -0.0 776,968 + +0.8 776,968 + +0.6 776,968 + +1.6 776,968 + +1.0 776,968 + -0.6 776,968 + +0.4 776,968 + +0.6 776,968 + +1.3 776,968 + +0.4 776,968 + -0.7 776,968 + -0.2 776,968 + +1.2 776,968 + -1.0 776,968 + +2.6 776,968 + -0.3 776,968 + +0.8 776,968 + +0.3 776,968 + +0.8 776,968 + -0.6 776,968 + -0.2 776,968 + -0.4 776,968 + +0.6 776,968 + +0.4 776,968 + -1.5 776,968 + -1.7 776,968 + -0.7 776,968 + +0.6 776,968 + -1.9 776,968 + -0.0 776,968 + +0.1 776,968 + -0.4 776,968 + -1.1 776,968 + +1.8 776,968 + +1.1 776,968 + -0.6 776,968 + +0.3 776,968 + -0.7 776,968 + +0.6 776,968 + -0.9 776,968 + -0.5 776,968 + -1.1 776,968 + -0.6 776,968 + +1.9 776,968 + +1.1 776,968 + +1.2 779,589 + MPMX19_00763 0.11 -0.2 779,589 + MPMX19_00763 0.11 +0.2 779,589 + MPMX19_00763 0.11 +0.2 779,589 + MPMX19_00763 0.11 -1.1 779,589 + MPMX19_00763 0.11 -0.4 779,590 - MPMX19_00763 0.11 -0.0 779,590 - MPMX19_00763 0.11 +0.8 779,590 - MPMX19_00763 0.11 -0.7 779,590 - MPMX19_00763 0.11 -0.4 779,755 - MPMX19_00763 0.21 -2.3
Or see this region's nucleotide sequence