Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00721 and MPMX19_00722 are separated by 126 nucleotides MPMX19_00722 and MPMX19_00723 are separated by 168 nucleotides MPMX19_00723 and MPMX19_00724 are separated by 396 nucleotides
MPMX19_00721: MPMX19_00721 - hypothetical protein, at 744,359 to 744,778
_00721
MPMX19_00722: MPMX19_00722 - Protein YciF, at 744,905 to 745,417
_00722
MPMX19_00723: MPMX19_00723 - hypothetical protein, at 745,586 to 745,816
_00723
MPMX19_00724: MPMX19_00724 - hypothetical protein, at 746,213 to 746,740
_00724
Position (kb) 745
746 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 744.618 kb on + strand, within MPMX19_00721 at 744.618 kb on + strand, within MPMX19_00721 at 744.618 kb on + strand, within MPMX19_00721 at 744.618 kb on + strand, within MPMX19_00721 at 744.618 kb on + strand, within MPMX19_00721 at 744.618 kb on + strand, within MPMX19_00721 at 744.618 kb on + strand, within MPMX19_00721 at 744.618 kb on + strand, within MPMX19_00721 at 744.618 kb on + strand, within MPMX19_00721 at 744.618 kb on + strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.619 kb on - strand, within MPMX19_00721 at 744.815 kb on + strand at 744.815 kb on + strand at 744.816 kb on - strand at 744.816 kb on - strand at 744.816 kb on - strand at 744.816 kb on - strand at 744.816 kb on - strand at 744.855 kb on + strand at 744.855 kb on + strand at 744.855 kb on + strand at 744.855 kb on + strand at 744.855 kb on + strand at 744.855 kb on + strand at 744.855 kb on + strand at 744.856 kb on - strand at 744.856 kb on - strand at 744.856 kb on - strand at 744.856 kb on - strand at 744.856 kb on - strand at 744.898 kb on + strand at 744.898 kb on + strand at 744.898 kb on + strand at 744.898 kb on + strand at 744.898 kb on + strand at 744.898 kb on + strand at 744.899 kb on - strand at 745.071 kb on + strand, within MPMX19_00722 at 745.071 kb on + strand, within MPMX19_00722 at 745.071 kb on + strand, within MPMX19_00722 at 745.071 kb on + strand, within MPMX19_00722 at 745.071 kb on + strand, within MPMX19_00722 at 745.071 kb on + strand, within MPMX19_00722 at 745.071 kb on + strand, within MPMX19_00722 at 745.071 kb on + strand, within MPMX19_00722 at 745.071 kb on + strand, within MPMX19_00722 at 745.072 kb on - strand, within MPMX19_00722 at 745.072 kb on - strand, within MPMX19_00722 at 745.072 kb on - strand, within MPMX19_00722 at 745.072 kb on - strand, within MPMX19_00722 at 745.072 kb on - strand, within MPMX19_00722 at 745.072 kb on - strand, within MPMX19_00722 at 745.086 kb on + strand, within MPMX19_00722 at 745.086 kb on + strand, within MPMX19_00722 at 745.086 kb on + strand, within MPMX19_00722 at 745.086 kb on + strand, within MPMX19_00722 at 745.086 kb on + strand, within MPMX19_00722 at 745.086 kb on + strand, within MPMX19_00722 at 745.086 kb on + strand, within MPMX19_00722 at 745.086 kb on + strand, within MPMX19_00722 at 745.086 kb on + strand, within MPMX19_00722 at 745.086 kb on + strand, within MPMX19_00722 at 745.086 kb on + strand, within MPMX19_00722 at 745.087 kb on - strand, within MPMX19_00722 at 745.087 kb on - strand, within MPMX19_00722 at 745.087 kb on - strand, within MPMX19_00722 at 745.087 kb on - strand, within MPMX19_00722 at 745.087 kb on - strand, within MPMX19_00722 at 745.087 kb on - strand, within MPMX19_00722 at 745.087 kb on - strand, within MPMX19_00722 at 745.365 kb on + strand, within MPMX19_00722 at 745.365 kb on + strand, within MPMX19_00722 at 745.365 kb on + strand, within MPMX19_00722 at 745.365 kb on + strand, within MPMX19_00722 at 745.365 kb on + strand, within MPMX19_00722 at 745.365 kb on + strand, within MPMX19_00722 at 745.365 kb on + strand, within MPMX19_00722 at 745.365 kb on + strand, within MPMX19_00722 at 745.365 kb on + strand, within MPMX19_00722 at 745.366 kb on - strand at 745.366 kb on - strand at 745.366 kb on - strand at 745.366 kb on - strand at 745.366 kb on - strand at 745.366 kb on - strand at 745.366 kb on - strand at 745.366 kb on - strand at 745.366 kb on - strand at 745.534 kb on + strand at 745.534 kb on + strand at 745.534 kb on + strand at 745.534 kb on + strand at 745.534 kb on + strand at 745.534 kb on + strand at 745.534 kb on + strand at 745.535 kb on - strand at 745.535 kb on - strand at 745.535 kb on - strand at 745.539 kb on + strand at 745.539 kb on + strand at 745.539 kb on + strand at 745.631 kb on + strand, within MPMX19_00723 at 745.631 kb on + strand, within MPMX19_00723 at 745.631 kb on + strand, within MPMX19_00723 at 745.631 kb on + strand, within MPMX19_00723 at 745.631 kb on + strand, within MPMX19_00723 at 745.631 kb on + strand, within MPMX19_00723 at 745.631 kb on + strand, within MPMX19_00723 at 745.631 kb on + strand, within MPMX19_00723 at 745.631 kb on + strand, within MPMX19_00723 at 745.631 kb on + strand, within MPMX19_00723 at 745.631 kb on + strand, within MPMX19_00723 at 745.631 kb on + strand, within MPMX19_00723 at 745.631 kb on + strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.632 kb on - strand, within MPMX19_00723 at 745.811 kb on + strand at 745.811 kb on + strand at 745.811 kb on + strand at 745.811 kb on + strand at 745.811 kb on + strand at 745.812 kb on - strand at 745.812 kb on - strand at 745.863 kb on + strand at 745.917 kb on - strand at 745.997 kb on + strand at 745.998 kb on - strand at 746.023 kb on + strand at 746.023 kb on + strand at 746.023 kb on + strand at 746.024 kb on - strand at 746.024 kb on - strand at 746.024 kb on - strand at 746.024 kb on - strand at 746.024 kb on - strand at 746.024 kb on - strand at 746.024 kb on - strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.029 kb on + strand at 746.030 kb on - strand at 746.030 kb on - strand at 746.030 kb on - strand at 746.030 kb on - strand at 746.030 kb on - strand at 746.030 kb on - strand at 746.030 kb on - strand at 746.030 kb on - strand at 746.030 kb on - strand at 746.030 kb on - strand at 746.062 kb on + strand at 746.062 kb on + strand at 746.062 kb on + strand at 746.062 kb on + strand at 746.062 kb on + strand at 746.062 kb on + strand at 746.063 kb on - strand at 746.071 kb on + strand at 746.071 kb on + strand at 746.071 kb on + strand at 746.071 kb on + strand at 746.071 kb on + strand at 746.224 kb on + strand at 746.224 kb on + strand at 746.224 kb on + strand at 746.738 kb on + strand at 746.738 kb on + strand at 746.738 kb on + strand at 746.738 kb on + strand at 746.739 kb on - strand at 746.739 kb on - strand at 746.739 kb on - strand at 746.739 kb on - strand at 746.739 kb on - strand at 746.739 kb on - strand at 746.739 kb on - strand at 746.739 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 744,618 + MPMX19_00721 0.62 +0.2 744,618 + MPMX19_00721 0.62 -1.2 744,618 + MPMX19_00721 0.62 -0.9 744,618 + MPMX19_00721 0.62 +0.5 744,618 + MPMX19_00721 0.62 +0.6 744,618 + MPMX19_00721 0.62 -0.7 744,618 + MPMX19_00721 0.62 -1.2 744,618 + MPMX19_00721 0.62 -1.0 744,618 + MPMX19_00721 0.62 -0.9 744,618 + MPMX19_00721 0.62 -1.0 744,619 - MPMX19_00721 0.62 +0.8 744,619 - MPMX19_00721 0.62 -0.1 744,619 - MPMX19_00721 0.62 -1.7 744,619 - MPMX19_00721 0.62 -1.5 744,619 - MPMX19_00721 0.62 -0.4 744,619 - MPMX19_00721 0.62 -0.5 744,619 - MPMX19_00721 0.62 -1.1 744,619 - MPMX19_00721 0.62 +0.8 744,619 - MPMX19_00721 0.62 -0.1 744,619 - MPMX19_00721 0.62 -0.4 744,619 - MPMX19_00721 0.62 +1.0 744,619 - MPMX19_00721 0.62 -0.7 744,619 - MPMX19_00721 0.62 +0.3 744,619 - MPMX19_00721 0.62 -0.5 744,619 - MPMX19_00721 0.62 -0.6 744,619 - MPMX19_00721 0.62 -1.6 744,619 - MPMX19_00721 0.62 -0.6 744,815 + -0.3 744,815 + -0.3 744,816 - +0.1 744,816 - +0.8 744,816 - +0.3 744,816 - -0.7 744,816 - +0.0 744,855 + -0.7 744,855 + -1.0 744,855 + -1.0 744,855 + -1.4 744,855 + +0.2 744,855 + -0.7 744,855 + +0.6 744,856 - -0.4 744,856 - +0.3 744,856 - -1.0 744,856 - -0.5 744,856 - -0.4 744,898 + -0.7 744,898 + -1.6 744,898 + -1.0 744,898 + -0.1 744,898 + +0.3 744,898 + -1.0 744,899 - -1.2 745,071 + MPMX19_00722 0.32 +0.2 745,071 + MPMX19_00722 0.32 -0.2 745,071 + MPMX19_00722 0.32 -2.3 745,071 + MPMX19_00722 0.32 +0.3 745,071 + MPMX19_00722 0.32 -0.1 745,071 + MPMX19_00722 0.32 -0.1 745,071 + MPMX19_00722 0.32 -0.7 745,071 + MPMX19_00722 0.32 -0.6 745,071 + MPMX19_00722 0.32 -1.0 745,072 - MPMX19_00722 0.33 -0.4 745,072 - MPMX19_00722 0.33 -0.6 745,072 - MPMX19_00722 0.33 +0.2 745,072 - MPMX19_00722 0.33 -1.9 745,072 - MPMX19_00722 0.33 -0.5 745,072 - MPMX19_00722 0.33 -0.1 745,086 + MPMX19_00722 0.35 -0.3 745,086 + MPMX19_00722 0.35 -1.6 745,086 + MPMX19_00722 0.35 -0.3 745,086 + MPMX19_00722 0.35 -0.7 745,086 + MPMX19_00722 0.35 +0.1 745,086 + MPMX19_00722 0.35 +0.2 745,086 + MPMX19_00722 0.35 +1.1 745,086 + MPMX19_00722 0.35 +0.3 745,086 + MPMX19_00722 0.35 -0.4 745,086 + MPMX19_00722 0.35 +1.9 745,086 + MPMX19_00722 0.35 -0.4 745,087 - MPMX19_00722 0.35 -0.6 745,087 - MPMX19_00722 0.35 +1.0 745,087 - MPMX19_00722 0.35 +0.8 745,087 - MPMX19_00722 0.35 +0.5 745,087 - MPMX19_00722 0.35 -0.5 745,087 - MPMX19_00722 0.35 -0.6 745,087 - MPMX19_00722 0.35 -0.2 745,365 + MPMX19_00722 0.90 -2.9 745,365 + MPMX19_00722 0.90 -0.1 745,365 + MPMX19_00722 0.90 -1.3 745,365 + MPMX19_00722 0.90 -1.4 745,365 + MPMX19_00722 0.90 +0.4 745,365 + MPMX19_00722 0.90 -1.0 745,365 + MPMX19_00722 0.90 -0.5 745,365 + MPMX19_00722 0.90 +1.0 745,365 + MPMX19_00722 0.90 -0.8 745,366 - +0.3 745,366 - -0.6 745,366 - +0.8 745,366 - -1.4 745,366 - -1.4 745,366 - -0.9 745,366 - +0.4 745,366 - -1.0 745,366 - +0.4 745,534 + -0.1 745,534 + +0.1 745,534 + -1.0 745,534 + -2.6 745,534 + +0.5 745,534 + -0.6 745,534 + +1.0 745,535 - -0.1 745,535 - -1.7 745,535 - -1.0 745,539 + +0.7 745,539 + +0.9 745,539 + -1.9 745,631 + MPMX19_00723 0.19 +1.6 745,631 + MPMX19_00723 0.19 -2.4 745,631 + MPMX19_00723 0.19 +1.1 745,631 + MPMX19_00723 0.19 +0.2 745,631 + MPMX19_00723 0.19 +1.1 745,631 + MPMX19_00723 0.19 -0.2 745,631 + MPMX19_00723 0.19 -1.6 745,631 + MPMX19_00723 0.19 +0.8 745,631 + MPMX19_00723 0.19 -0.9 745,631 + MPMX19_00723 0.19 -0.3 745,631 + MPMX19_00723 0.19 -0.1 745,631 + MPMX19_00723 0.19 +0.6 745,631 + MPMX19_00723 0.19 +0.6 745,632 - MPMX19_00723 0.20 +0.6 745,632 - MPMX19_00723 0.20 -1.9 745,632 - MPMX19_00723 0.20 +0.1 745,632 - MPMX19_00723 0.20 -0.3 745,632 - MPMX19_00723 0.20 +0.2 745,632 - MPMX19_00723 0.20 -1.8 745,632 - MPMX19_00723 0.20 -1.1 745,632 - MPMX19_00723 0.20 +0.1 745,632 - MPMX19_00723 0.20 -0.6 745,632 - MPMX19_00723 0.20 -0.8 745,632 - MPMX19_00723 0.20 +1.0 745,632 - MPMX19_00723 0.20 +1.6 745,632 - MPMX19_00723 0.20 -2.3 745,811 + +0.3 745,811 + -0.4 745,811 + -0.5 745,811 + +0.9 745,811 + +0.6 745,812 - -0.9 745,812 - +0.2 745,863 + -0.3 745,917 - -0.3 745,997 + +0.1 745,998 - +0.1 746,023 + -0.4 746,023 + -2.0 746,023 + -1.9 746,024 - -0.2 746,024 - +0.2 746,024 - -1.6 746,024 - -1.4 746,024 - +0.2 746,024 - -0.7 746,024 - -1.2 746,029 + +0.7 746,029 + -1.2 746,029 + -0.4 746,029 + -0.6 746,029 + -0.5 746,029 + -1.0 746,029 + -1.0 746,029 + -2.2 746,029 + -0.3 746,029 + -0.8 746,029 + +0.4 746,029 + -0.2 746,029 + +0.9 746,029 + -1.0 746,029 + +0.0 746,029 + -0.0 746,029 + -0.4 746,029 + -0.1 746,029 + -0.3 746,029 + +0.9 746,029 + -2.4 746,029 + -0.2 746,029 + +0.8 746,029 + -1.2 746,029 + -0.4 746,029 + -2.1 746,029 + +0.1 746,029 + +0.6 746,029 + -0.3 746,029 + -0.5 746,029 + -2.0 746,030 - +0.3 746,030 - +0.4 746,030 - -1.9 746,030 - +0.1 746,030 - -0.9 746,030 - +0.5 746,030 - -1.1 746,030 - +0.3 746,030 - +0.3 746,030 - -2.1 746,062 + -2.3 746,062 + +0.3 746,062 + +0.3 746,062 + +0.6 746,062 + -1.9 746,062 + -0.4 746,063 - +0.9 746,071 + -1.7 746,071 + +0.8 746,071 + +0.0 746,071 + -1.6 746,071 + +1.2 746,224 + +0.0 746,224 + -0.4 746,224 + -0.0 746,738 + +0.5 746,738 + -0.1 746,738 + +0.2 746,738 + -0.4 746,739 - +0.3 746,739 - +0.3 746,739 - -1.6 746,739 - +0.2 746,739 - +0.4 746,739 - -0.9 746,739 - -1.0 746,739 - +0.6
Or see this region's nucleotide sequence